Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 RNU7-185P-201ENST00000459215 60 ntBASIC0.82□□□□□ -2.28
HCN3Q9P1Z3 MIR4804-201ENST00000581683 73 ntBASIC0.82□□□□□ -2.28
HCN3Q9P1Z3 MIR30D-201ENST00000362283 70 ntBASIC0.81□□□□□ -2.28
HCN3Q9P1Z3 MIR938-201ENST00000401216 83 ntBASIC0.81□□□□□ -2.28
HCN3Q9P1Z3 RNU6-1135P-201ENST00000411083 103 ntBASIC0.81□□□□□ -2.28
HCN3Q9P1Z3 RNA5SP236-201ENST00000516169 116 ntBASIC0.81□□□□□ -2.28
HCN3Q9P1Z3 CYP3A137P-201ENST00000562436 69 ntBASIC0.81□□□□□ -2.28
HCN3Q9P1Z3 FAM71BP1-201ENST00000604431 523 ntBASIC0.81□□□□□ -2.28
HCN3Q9P1Z3 AL662814.1-201ENST00000617364 121 ntBASIC0.81□□□□□ -2.28
HCN3Q9P1Z3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.8□□□□□ -2.28
HCN3Q9P1Z3 RNU6-349P-201ENST00000362402 107 ntBASIC0.8□□□□□ -2.28
HCN3Q9P1Z3 Y_RNA.270-201ENST00000364693 104 ntBASIC0.8□□□□□ -2.28
HCN3Q9P1Z3 RNU4-11P-201ENST00000365287 132 ntBASIC0.8□□□□□ -2.28
HCN3Q9P1Z3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
HCN3Q9P1Z3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
HCN3Q9P1Z3 RNU1-119P-201ENST00000391122 165 ntBASIC0.8□□□□□ -2.28
HCN3Q9P1Z3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.8□□□□□ -2.28
HCN3Q9P1Z3 SNORD93-201ENST00000408813 74 ntBASIC0.8□□□□□ -2.28
HCN3Q9P1Z3 AL022718.1-201ENST00000412004 84 ntBASIC0.8□□□□□ -2.28
HCN3Q9P1Z3 AC112693.2-201ENST00000556538 232 ntBASIC0.8□□□□□ -2.28
HCN3Q9P1Z3 Y_RNA.757-201ENST00000578934 114 ntBASIC0.8□□□□□ -2.28
HCN3Q9P1Z3 AC013244.2-201ENST00000603396 103 ntBASIC0.8□□□□□ -2.28
HCN3Q9P1Z3 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.8□□□□□ -2.28
HCN3Q9P1Z3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.8□□□□□ -2.28
HCN3Q9P1Z3 Y_RNA.171-201ENST00000363760 102 ntBASIC0.79□□□□□ -2.28
HCN3Q9P1Z3 RNU6-151P-201ENST00000364158 107 ntBASIC0.79□□□□□ -2.28
HCN3Q9P1Z3 SNORA18-201ENST00000384416 132 ntBASIC0.79□□□□□ -2.28
HCN3Q9P1Z3 MIR125B2-201ENST00000385128 89 ntBASIC0.79□□□□□ -2.28
HCN3Q9P1Z3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
HCN3Q9P1Z3 RNA5SP222-201ENST00000411039 105 ntBASIC0.79□□□□□ -2.28
HCN3Q9P1Z3 RNU5E-3P-201ENST00000515913 68 ntBASIC0.79□□□□□ -2.28
HCN3Q9P1Z3 Y_RNA.8-201ENST00000362353 102 ntBASIC0.78□□□□□ -2.28
HCN3Q9P1Z3 Y_RNA.150-201ENST00000363562 102 ntBASIC0.78□□□□□ -2.28
HCN3Q9P1Z3 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
HCN3Q9P1Z3 RNU6-449P-201ENST00000383914 107 ntBASIC0.78□□□□□ -2.28
HCN3Q9P1Z3 MIR146A-201ENST00000385201 99 ntBASIC0.78□□□□□ -2.28
HCN3Q9P1Z3 RNU6-447P-201ENST00000410293 104 ntBASIC0.78□□□□□ -2.28
HCN3Q9P1Z3 RNU6-1118P-201ENST00000410382 104 ntBASIC0.78□□□□□ -2.28
HCN3Q9P1Z3 RNU6-1076P-201ENST00000410397 104 ntBASIC0.78□□□□□ -2.28
HCN3Q9P1Z3 RNU6-355P-201ENST00000410427 104 ntBASIC0.78□□□□□ -2.28
HCN3Q9P1Z3 RNU6-791P-201ENST00000410467 104 ntBASIC0.78□□□□□ -2.28
HCN3Q9P1Z3 RNU6-705P-201ENST00000410601 104 ntBASIC0.78□□□□□ -2.28
HCN3Q9P1Z3 RNU6-1100P-201ENST00000410691 104 ntBASIC0.78□□□□□ -2.28
HCN3Q9P1Z3 RNA5SP144-201ENST00000410846 116 ntBASIC0.78□□□□□ -2.28
HCN3Q9P1Z3 RNU6-860P-201ENST00000410860 104 ntBASIC0.78□□□□□ -2.28
HCN3Q9P1Z3 RNU6-1217P-201ENST00000411276 104 ntBASIC0.78□□□□□ -2.28
HCN3Q9P1Z3 RNU6-785P-201ENST00000411324 104 ntBASIC0.78□□□□□ -2.28
HCN3Q9P1Z3 AC244098.3-201ENST00000424803 96 ntBASIC0.78□□□□□ -2.28
HCN3Q9P1Z3 RNU7-56P-201ENST00000458744 62 ntBASIC0.78□□□□□ -2.28
HCN3Q9P1Z3 RNU7-113P-201ENST00000459273 62 ntBASIC0.78□□□□□ -2.28
HCN3Q9P1Z3 RNU6-240P-201ENST00000516098 97 ntBASIC0.78□□□□□ -2.28
HCN3Q9P1Z3 RNU6-1258P-201ENST00000516911 111 ntBASIC0.78□□□□□ -2.28
HCN3Q9P1Z3 RNU7-156P-201ENST00000517214 74 ntBASIC0.78□□□□□ -2.28
HCN3Q9P1Z3 AC141846.1-201ENST00000568348 142 ntBASIC0.78□□□□□ -2.28
HCN3Q9P1Z3 U6.90-201ENST00000614007 104 ntBASIC0.78□□□□□ -2.28
HCN3Q9P1Z3 U6.70-201ENST00000620287 104 ntBASIC0.78□□□□□ -2.28
HCN3Q9P1Z3 RNY1P11-201ENST00000363759 113 ntBASIC0.77□□□□□ -2.29
HCN3Q9P1Z3 SNORD116-18-201ENST00000383961 92 ntBASIC0.77□□□□□ -2.29
HCN3Q9P1Z3 MIR193B-201ENST00000384907 83 ntBASIC0.77□□□□□ -2.29
HCN3Q9P1Z3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.77□□□□□ -2.29
HCN3Q9P1Z3 MIR1273G-201ENST00000577677 100 ntBASIC0.77□□□□□ -2.29
HCN3Q9P1Z3 AC011603.4-201ENST00000611325 277 ntBASIC0.77□□□□□ -2.29
HCN3Q9P1Z3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.77□□□□□ -2.29
HCN3Q9P1Z3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
HCN3Q9P1Z3 Y_RNA.178-201ENST00000363832 102 ntBASIC0.76□□□□□ -2.29
HCN3Q9P1Z3 RNU4-83P-201ENST00000410863 133 ntBASIC0.76□□□□□ -2.29
HCN3Q9P1Z3 RNU7-102P-201ENST00000458948 62 ntBASIC0.76□□□□□ -2.29
HCN3Q9P1Z3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.76□□□□□ -2.29
HCN3Q9P1Z3 Y_RNA.690-201ENST00000516603 95 ntBASIC0.76□□□□□ -2.29
HCN3Q9P1Z3 RNA5SP33-201ENST00000516687 98 ntBASIC0.76□□□□□ -2.29
HCN3Q9P1Z3 RNU2-60P-201ENST00000517290 128 ntBASIC0.76□□□□□ -2.29
HCN3Q9P1Z3 AC133485.4-201ENST00000561835 220 ntBASIC0.76□□□□□ -2.29
HCN3Q9P1Z3 AC138907.4-201ENST00000570107 226 ntBASIC0.76□□□□□ -2.29
HCN3Q9P1Z3 MIR4653-201ENST00000585107 83 ntBASIC0.76□□□□□ -2.29
HCN3Q9P1Z3 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
HCN3Q9P1Z3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
HCN3Q9P1Z3 RNU6-508P-201ENST00000363231 103 ntBASIC0.75□□□□□ -2.29
HCN3Q9P1Z3 RNA5SP457-201ENST00000363657 124 ntBASIC0.75□□□□□ -2.29
HCN3Q9P1Z3 RNU6-1130P-201ENST00000365434 107 ntBASIC0.75□□□□□ -2.29
HCN3Q9P1Z3 SNORA36.2-201ENST00000384004 127 ntBASIC0.75□□□□□ -2.29
HCN3Q9P1Z3 RNU6-110P-201ENST00000384508 104 ntBASIC0.75□□□□□ -2.29
HCN3Q9P1Z3 MIR573-201ENST00000384964 99 ntBASIC0.75□□□□□ -2.29
HCN3Q9P1Z3 Y_RNA.686-201ENST00000516548 134 ntBASIC0.75□□□□□ -2.29
HCN3Q9P1Z3 RNU6-794P-201ENST00000517261 64 ntBASIC0.75□□□□□ -2.29
HCN3Q9P1Z3 MIR4305-201ENST00000583252 102 ntBASIC0.75□□□□□ -2.29
HCN3Q9P1Z3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.75□□□□□ -2.29
HCN3Q9P1Z3 Y_RNA.778-201ENST00000620203 90 ntBASIC0.75□□□□□ -2.29
HCN3Q9P1Z3 RNU6-403P-201ENST00000363163 104 ntBASIC0.74□□□□□ -2.29
HCN3Q9P1Z3 Y_RNA.120-201ENST00000363304 110 ntBASIC0.74□□□□□ -2.29
HCN3Q9P1Z3 RNU6-309P-201ENST00000364573 106 ntBASIC0.74□□□□□ -2.29
HCN3Q9P1Z3 RNU6-804P-201ENST00000384286 107 ntBASIC0.74□□□□□ -2.29
HCN3Q9P1Z3 MIR513C-201ENST00000401352 84 ntBASIC0.74□□□□□ -2.29
HCN3Q9P1Z3 RNU6-1086P-201ENST00000410930 100 ntBASIC0.74□□□□□ -2.29
HCN3Q9P1Z3 AL606490.4-201ENST00000423117 127 ntBASIC0.74□□□□□ -2.29
HCN3Q9P1Z3 AC004941.2-201ENST00000427009 228 ntBASIC0.74□□□□□ -2.29
HCN3Q9P1Z3 AC008608.1-201ENST00000603910 127 ntBASIC0.74□□□□□ -2.29
HCN3Q9P1Z3 AC021443.1-201ENST00000604478 211 ntBASIC0.74□□□□□ -2.29
HCN3Q9P1Z3 FTX_2.1-201ENST00000618816 94 ntBASIC0.74□□□□□ -2.29
HCN3Q9P1Z3 AL589743.1-201ENST00000551932 2712 ntBASIC0.74□□□□□ -2.29
HCN3Q9P1Z3 Y_RNA.251-201ENST00000364551 99 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms