Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.89□□□□□ -2.55
PHRF1Q9P1Y6 MT-TY-201ENST00000387409 66 ntBASIC-0.89□□□□□ -2.55
PHRF1Q9P1Y6 MIR1285-2-201ENST00000408311 88 ntBASIC-0.89□□□□□ -2.55
PHRF1Q9P1Y6 AC099799.1-201ENST00000439809 192 ntBASIC-0.89□□□□□ -2.55
PHRF1Q9P1Y6 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.89□□□□□ -2.55
PHRF1Q9P1Y6 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.89□□□□□ -2.55
PHRF1Q9P1Y6 RNA5SP169-201ENST00000517268 117 ntBASIC-0.89□□□□□ -2.55
PHRF1Q9P1Y6 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.89□□□□□ -2.55
PHRF1Q9P1Y6 MIR3611-201ENST00000584484 83 ntBASIC-0.89□□□□□ -2.55
PHRF1Q9P1Y6 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.89□□□□□ -2.55
PHRF1Q9P1Y6 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.89□□□□□ -2.55
PHRF1Q9P1Y6 U4.2-201ENST00000618561 85 ntBASIC-0.89□□□□□ -2.55
PHRF1Q9P1Y6 U6.109-201ENST00000636749 87 ntBASIC-0.89□□□□□ -2.55
PHRF1Q9P1Y6 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.89□□□□□ -2.55
PHRF1Q9P1Y6 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.89□□□□□ -2.55
PHRF1Q9P1Y6 Y_RNA.559-201ENST00000384686 107 ntBASIC-0.89□□□□□ -2.55
PHRF1Q9P1Y6 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.89□□□□□ -2.55
PHRF1Q9P1Y6 AL500527.2-201ENST00000454105 95 ntBASIC-0.89□□□□□ -2.55
PHRF1Q9P1Y6 RNU6-274P-201ENST00000459566 107 ntBASIC-0.89□□□□□ -2.55
PHRF1Q9P1Y6 MRPS35P2-201ENST00000508242 191 ntBASIC-0.89□□□□□ -2.55
PHRF1Q9P1Y6 RNA5SP33-201ENST00000516687 98 ntBASIC-0.89□□□□□ -2.55
PHRF1Q9P1Y6 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.89□□□□□ -2.55
PHRF1Q9P1Y6 MIR4441-201ENST00000582623 100 ntBASIC-0.89□□□□□ -2.55
PHRF1Q9P1Y6 MIR6841-201ENST00000637129 72 ntBASIC-0.89□□□□□ -2.55
PHRF1Q9P1Y6 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.9□□□□□ -2.55
PHRF1Q9P1Y6 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.9□□□□□ -2.55
PHRF1Q9P1Y6 MIR628-201ENST00000385229 95 ntBASIC-0.9□□□□□ -2.55
PHRF1Q9P1Y6 RNU6-120P-201ENST00000516077 103 ntBASIC-0.9□□□□□ -2.55
PHRF1Q9P1Y6 MIR4306-201ENST00000583390 91 ntBASIC-0.9□□□□□ -2.55
PHRF1Q9P1Y6 AL121655.1-201ENST00000605811 308 ntBASIC-0.9□□□□□ -2.55
PHRF1Q9P1Y6 AC048344.4-201ENST00000619744 527 ntBASIC-0.9□□□□□ -2.55
PHRF1Q9P1Y6 AC138305.3-201ENST00000624988 240 ntBASIC-0.9□□□□□ -2.55
PHRF1Q9P1Y6 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.91□□□□□ -2.56
PHRF1Q9P1Y6 AL603914.1-201ENST00000401964 204 ntBASIC-0.91□□□□□ -2.56
PHRF1Q9P1Y6 MIR548F5-201ENST00000408421 86 ntBASIC-0.91□□□□□ -2.56
PHRF1Q9P1Y6 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-0.91□□□□□ -2.56
PHRF1Q9P1Y6 RNU7-13P-201ENST00000516413 62 ntBASIC-0.91□□□□□ -2.56
PHRF1Q9P1Y6 MIR3115-201ENST00000577915 68 ntBASIC-0.91□□□□□ -2.56
PHRF1Q9P1Y6 C8orf59P2-201ENST00000603441 271 ntBASIC-0.91□□□□□ -2.56
PHRF1Q9P1Y6 AC025253.1-201ENST00000613623 543 ntBASIC-0.91□□□□□ -2.56
PHRF1Q9P1Y6 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-0.91□□□□□ -2.56
PHRF1Q9P1Y6 uc_338.19-201ENST00000616808 99 ntBASIC-0.91□□□□□ -2.56
PHRF1Q9P1Y6 Y_RNA.88-201ENST00000363029 99 ntBASIC-0.92□□□□□ -2.56
PHRF1Q9P1Y6 Y_RNA.89-201ENST00000363031 102 ntBASIC-0.92□□□□□ -2.56
PHRF1Q9P1Y6 RNU6-1188P-201ENST00000363795 107 ntBASIC-0.92□□□□□ -2.56
PHRF1Q9P1Y6 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.92□□□□□ -2.56
PHRF1Q9P1Y6 Y_RNA.573-201ENST00000384763 105 ntBASIC-0.92□□□□□ -2.56
PHRF1Q9P1Y6 SNORA53-201ENST00000391141 249 ntBASIC-0.92□□□□□ -2.56
PHRF1Q9P1Y6 AC097635.1-201ENST00000450678 155 ntBASIC-0.92□□□□□ -2.56
PHRF1Q9P1Y6 RNU6-706P-201ENST00000517229 104 ntBASIC-0.92□□□□□ -2.56
PHRF1Q9P1Y6 MIR6851-201ENST00000617060 67 ntBASIC-0.92□□□□□ -2.56
PHRF1Q9P1Y6 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.92□□□□□ -2.56
PHRF1Q9P1Y6 RNU4-36P-201ENST00000364294 144 ntBASIC-0.93□□□□□ -2.56
PHRF1Q9P1Y6 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.93□□□□□ -2.56
PHRF1Q9P1Y6 MIR519E-201ENST00000385075 84 ntBASIC-0.93□□□□□ -2.56
PHRF1Q9P1Y6 MIR526A2-201ENST00000390198 65 ntBASIC-0.93□□□□□ -2.56
PHRF1Q9P1Y6 RNU7-113P-201ENST00000459273 62 ntBASIC-0.93□□□□□ -2.56
PHRF1Q9P1Y6 AC245505.1-201ENST00000556398 224 ntBASIC-0.93□□□□□ -2.56
PHRF1Q9P1Y6 MTND5P40-201ENST00000559945 246 ntBASIC-0.93□□□□□ -2.56
PHRF1Q9P1Y6 AC097639.2-201ENST00000603159 172 ntBASIC-0.93□□□□□ -2.56
PHRF1Q9P1Y6 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.93□□□□□ -2.56
PHRF1Q9P1Y6 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.93□□□□□ -2.56
PHRF1Q9P1Y6 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.93□□□□□ -2.56
PHRF1Q9P1Y6 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.93□□□□□ -2.56
PHRF1Q9P1Y6 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.93□□□□□ -2.56
PHRF1Q9P1Y6 RNU6-507P-201ENST00000516045 100 ntBASIC-0.93□□□□□ -2.56
PHRF1Q9P1Y6 SNORD67.1-201ENST00000516618 108 ntBASIC-0.93□□□□□ -2.56
PHRF1Q9P1Y6 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.93□□□□□ -2.56
PHRF1Q9P1Y6 AP000676.1-201ENST00000533307 52 ntBASIC-0.93□□□□□ -2.56
PHRF1Q9P1Y6 MIR3974-201ENST00000637126 96 ntBASIC-0.93□□□□□ -2.56
PHRF1Q9P1Y6 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.94□□□□□ -2.56
PHRF1Q9P1Y6 RNY3P11-201ENST00000364153 102 ntBASIC-0.94□□□□□ -2.56
PHRF1Q9P1Y6 MIR539-201ENST00000365690 78 ntBASIC-0.94□□□□□ -2.56
PHRF1Q9P1Y6 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.94□□□□□ -2.56
PHRF1Q9P1Y6 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.94□□□□□ -2.56
PHRF1Q9P1Y6 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.94□□□□□ -2.56
PHRF1Q9P1Y6 AC244090.1-201ENST00000441884 93 ntBASIC-0.94□□□□□ -2.56
PHRF1Q9P1Y6 RNU6-191P-201ENST00000516295 94 ntBASIC-0.94□□□□□ -2.56
PHRF1Q9P1Y6 RNU6-358P-201ENST00000516564 75 ntBASIC-0.94□□□□□ -2.56
PHRF1Q9P1Y6 SNORD38.3-201ENST00000516599 73 ntBASIC-0.94□□□□□ -2.56
PHRF1Q9P1Y6 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.94□□□□□ -2.56
PHRF1Q9P1Y6 MIR3129-201ENST00000581095 76 ntBASIC-0.94□□□□□ -2.56
PHRF1Q9P1Y6 MIR4473-201ENST00000583731 91 ntBASIC-0.94□□□□□ -2.56
PHRF1Q9P1Y6 AC098479.1-201ENST00000609225 154 ntBASIC-0.94□□□□□ -2.56
PHRF1Q9P1Y6 AL669831.3-213ENST00000636676 183 ntBASIC-0.94□□□□□ -2.56
PHRF1Q9P1Y6 RNU6-937P-201ENST00000384325 106 ntBASIC-0.95□□□□□ -2.56
PHRF1Q9P1Y6 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.95□□□□□ -2.56
PHRF1Q9P1Y6 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.95□□□□□ -2.56
PHRF1Q9P1Y6 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.95□□□□□ -2.56
PHRF1Q9P1Y6 AC016907.1-201ENST00000419483 435 ntBASIC-0.95□□□□□ -2.56
PHRF1Q9P1Y6 AC096644.2-201ENST00000429278 159 ntBASIC-0.95□□□□□ -2.56
PHRF1Q9P1Y6 SNORA40.14-201ENST00000516543 86 ntBASIC-0.95□□□□□ -2.56
PHRF1Q9P1Y6 RNU7-30P-201ENST00000516835 62 ntBASIC-0.95□□□□□ -2.56
PHRF1Q9P1Y6 RNU6-158P-201ENST00000517104 100 ntBASIC-0.95□□□□□ -2.56
PHRF1Q9P1Y6 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.95□□□□□ -2.56
PHRF1Q9P1Y6 AC024909.2-201ENST00000553035 286 ntBASIC-0.95□□□□□ -2.56
PHRF1Q9P1Y6 MIR3179-1-201ENST00000578940 84 ntBASIC-0.95□□□□□ -2.56
PHRF1Q9P1Y6 MIR3179-2-201ENST00000579107 84 ntBASIC-0.95□□□□□ -2.56
PHRF1Q9P1Y6 MIR3179-3-201ENST00000579566 84 ntBASIC-0.95□□□□□ -2.56
PHRF1Q9P1Y6 RPS29P30-201ENST00000600975 111 ntBASIC-0.95□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms