Protein–RNA interactions for Protein: Q9NY46

SCN3A, Sodium channel protein type 3 subunit alpha, humanhuman

Predictions only

Length 2,000 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3AQ9NY46 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.84□□□□□ -2.54
SCN3AQ9NY46 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.84□□□□□ -2.54
SCN3AQ9NY46 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.84□□□□□ -2.54
SCN3AQ9NY46 RNU7-70P-201ENST00000516941 66 ntBASIC-0.84□□□□□ -2.54
SCN3AQ9NY46 AC040926.1-201ENST00000530195 238 ntBASIC-0.84□□□□□ -2.54
SCN3AQ9NY46 MIR4306-201ENST00000583390 91 ntBASIC-0.84□□□□□ -2.54
SCN3AQ9NY46 RNU4-50P-201ENST00000364361 141 ntBASIC-0.85□□□□□ -2.55
SCN3AQ9NY46 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.85□□□□□ -2.55
SCN3AQ9NY46 Y_RNA.599-201ENST00000410489 109 ntBASIC-0.85□□□□□ -2.55
SCN3AQ9NY46 MTND4P17-201ENST00000470444 350 ntBASIC-0.85□□□□□ -2.55
SCN3AQ9NY46 SNORA40.14-201ENST00000516543 86 ntBASIC-0.85□□□□□ -2.55
SCN3AQ9NY46 RNU6-453P-201ENST00000516819 85 ntBASIC-0.85□□□□□ -2.55
SCN3AQ9NY46 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.86□□□□□ -2.55
SCN3AQ9NY46 MT-TY-201ENST00000387409 66 ntBASIC-0.86□□□□□ -2.55
SCN3AQ9NY46 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.86□□□□□ -2.55
SCN3AQ9NY46 RNA5SP153-201ENST00000516498 76 ntBASIC-0.86□□□□□ -2.55
SCN3AQ9NY46 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.86□□□□□ -2.55
SCN3AQ9NY46 AL606534.2-204ENST00000635008 178 ntBASIC-0.86□□□□□ -2.55
SCN3AQ9NY46 RNU6-47P-201ENST00000383866 107 ntBASIC-0.86□□□□□ -2.55
SCN3AQ9NY46 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.86□□□□□ -2.55
SCN3AQ9NY46 RNU6-901P-201ENST00000384593 106 ntBASIC-0.86□□□□□ -2.55
SCN3AQ9NY46 Y_RNA.554-201ENST00000384672 102 ntBASIC-0.86□□□□□ -2.55
SCN3AQ9NY46 RNA5SP484-201ENST00000458857 111 ntBASIC-0.86□□□□□ -2.55
SCN3AQ9NY46 MIR5690-201ENST00000583739 73 ntBASIC-0.86□□□□□ -2.55
SCN3AQ9NY46 MIR4272-201ENST00000635924 64 ntBASIC-0.86□□□□□ -2.55
SCN3AQ9NY46 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.87□□□□□ -2.55
SCN3AQ9NY46 RNU1-141P-201ENST00000364623 158 ntBASIC-0.87□□□□□ -2.55
SCN3AQ9NY46 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.87□□□□□ -2.55
SCN3AQ9NY46 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.87□□□□□ -2.55
SCN3AQ9NY46 RNU2-16P-201ENST00000410712 136 ntBASIC-0.87□□□□□ -2.55
SCN3AQ9NY46 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-0.87□□□□□ -2.55
SCN3AQ9NY46 SEPT14P8-201ENST00000508026 178 ntBASIC-0.87□□□□□ -2.55
SCN3AQ9NY46 AC021146.6-201ENST00000514659 117 ntBASIC-0.87□□□□□ -2.55
SCN3AQ9NY46 RNU6-699P-201ENST00000517081 110 ntBASIC-0.87□□□□□ -2.55
SCN3AQ9NY46 MIR4500-201ENST00000579472 76 ntBASIC-0.87□□□□□ -2.55
SCN3AQ9NY46 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.88□□□□□ -2.55
SCN3AQ9NY46 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.88□□□□□ -2.55
SCN3AQ9NY46 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.88□□□□□ -2.55
SCN3AQ9NY46 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.88□□□□□ -2.55
SCN3AQ9NY46 RNU7-13P-201ENST00000516413 62 ntBASIC-0.88□□□□□ -2.55
SCN3AQ9NY46 C8orf59P2-201ENST00000603441 271 ntBASIC-0.88□□□□□ -2.55
SCN3AQ9NY46 MIR6851-201ENST00000617060 67 ntBASIC-0.88□□□□□ -2.55
SCN3AQ9NY46 AC021613.1-201ENST00000623880 111 ntBASIC-0.88□□□□□ -2.55
SCN3AQ9NY46 MIR6841-201ENST00000637129 72 ntBASIC-0.88□□□□□ -2.55
SCN3AQ9NY46 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.88□□□□□ -2.55
SCN3AQ9NY46 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.88□□□□□ -2.55
SCN3AQ9NY46 SNORA79-201ENST00000408376 140 ntBASIC-0.88□□□□□ -2.55
SCN3AQ9NY46 RNU6-130P-201ENST00000411112 103 ntBASIC-0.88□□□□□ -2.55
SCN3AQ9NY46 RNA5SP403-201ENST00000363598 108 ntBASIC-0.89□□□□□ -2.55
SCN3AQ9NY46 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.89□□□□□ -2.55
SCN3AQ9NY46 SNORD24-201ENST00000383884 75 ntBASIC-0.89□□□□□ -2.55
SCN3AQ9NY46 RNU6-890P-201ENST00000384121 107 ntBASIC-0.89□□□□□ -2.55
SCN3AQ9NY46 MIR9-2-201ENST00000384838 87 ntBASIC-0.89□□□□□ -2.55
SCN3AQ9NY46 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-0.89□□□□□ -2.55
SCN3AQ9NY46 SNORA25.13-201ENST00000516395 103 ntBASIC-0.89□□□□□ -2.55
SCN3AQ9NY46 MIR3129-201ENST00000581095 76 ntBASIC-0.89□□□□□ -2.55
SCN3AQ9NY46 MIR4280-201ENST00000582178 76 ntBASIC-0.89□□□□□ -2.55
SCN3AQ9NY46 AC006006.1-201ENST00000603082 144 ntBASIC-0.89□□□□□ -2.55
SCN3AQ9NY46 AL008718.3-201ENST00000610217 321 ntBASIC-0.89□□□□□ -2.55
SCN3AQ9NY46 AC112487.2-201ENST00000637950 304 ntBASIC-0.89□□□□□ -2.55
SCN3AQ9NY46 MIR204-201ENST00000385200 110 ntBASIC-0.89□□□□□ -2.55
SCN3AQ9NY46 RNU4-14P-201ENST00000410858 122 ntBASIC-0.89□□□□□ -2.55
SCN3AQ9NY46 RNU6-370P-201ENST00000411008 104 ntBASIC-0.89□□□□□ -2.55
SCN3AQ9NY46 MTND1P29-201ENST00000448112 647 ntBASIC-0.89□□□□□ -2.55
SCN3AQ9NY46 SNORA27.4-201ENST00000516650 95 ntBASIC-0.89□□□□□ -2.55
SCN3AQ9NY46 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.9□□□□□ -2.55
SCN3AQ9NY46 RNU4-16P-201ENST00000364737 141 ntBASIC-0.9□□□□□ -2.55
SCN3AQ9NY46 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.9□□□□□ -2.55
SCN3AQ9NY46 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.9□□□□□ -2.55
SCN3AQ9NY46 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.9□□□□□ -2.55
SCN3AQ9NY46 RNA5SP33-201ENST00000516687 98 ntBASIC-0.9□□□□□ -2.55
SCN3AQ9NY46 RNU6-881P-201ENST00000516813 102 ntBASIC-0.9□□□□□ -2.55
SCN3AQ9NY46 MIR3165-201ENST00000579874 75 ntBASIC-0.9□□□□□ -2.55
SCN3AQ9NY46 MIR3920-201ENST00000581751 86 ntBASIC-0.9□□□□□ -2.55
SCN3AQ9NY46 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.91□□□□□ -2.55
SCN3AQ9NY46 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.91□□□□□ -2.55
SCN3AQ9NY46 MIR548I2-201ENST00000408348 149 ntBASIC-0.91□□□□□ -2.55
SCN3AQ9NY46 AC093423.1-201ENST00000440817 142 ntBASIC-0.91□□□□□ -2.55
SCN3AQ9NY46 RNU7-48P-201ENST00000458875 63 ntBASIC-0.91□□□□□ -2.55
SCN3AQ9NY46 MIR4324-201ENST00000584846 72 ntBASIC-0.91□□□□□ -2.55
SCN3AQ9NY46 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.91□□□□□ -2.55
SCN3AQ9NY46 U4.5-201ENST00000617137 123 ntBASIC-0.91□□□□□ -2.55
SCN3AQ9NY46 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.91□□□□□ -2.55
SCN3AQ9NY46 RNU4-32P-201ENST00000363404 141 ntBASIC-0.91□□□□□ -2.56
SCN3AQ9NY46 RNU4-10P-201ENST00000364383 140 ntBASIC-0.91□□□□□ -2.56
SCN3AQ9NY46 MIR539-201ENST00000365690 78 ntBASIC-0.91□□□□□ -2.56
SCN3AQ9NY46 SNORD116-6-201ENST00000384711 96 ntBASIC-0.91□□□□□ -2.56
SCN3AQ9NY46 MIR206-201ENST00000384872 86 ntBASIC-0.91□□□□□ -2.56
SCN3AQ9NY46 MIR526A2-201ENST00000390198 65 ntBASIC-0.91□□□□□ -2.56
SCN3AQ9NY46 AC096644.2-201ENST00000429278 159 ntBASIC-0.91□□□□□ -2.56
SCN3AQ9NY46 AL731563.1-201ENST00000442202 214 ntBASIC-0.91□□□□□ -2.56
SCN3AQ9NY46 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.91□□□□□ -2.56
SCN3AQ9NY46 AC024909.2-201ENST00000553035 286 ntBASIC-0.91□□□□□ -2.56
SCN3AQ9NY46 DEFB117-201ENST00000602356 141 ntBASIC-0.91□□□□□ -2.56
SCN3AQ9NY46 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.92□□□□□ -2.56
SCN3AQ9NY46 SNORD114-3-201ENST00000364969 75 ntBASIC-0.92□□□□□ -2.56
SCN3AQ9NY46 RNY1P6-201ENST00000384193 109 ntBASIC-0.92□□□□□ -2.56
SCN3AQ9NY46 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.92□□□□□ -2.56
SCN3AQ9NY46 SNRPGP8-201ENST00000454064 226 ntBASIC-0.92□□□□□ -2.56
SCN3AQ9NY46 RNU7-152P-201ENST00000458982 64 ntBASIC-0.92□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 193.2 ms