Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MIR7111-201ENST00000619751 72 ntBASIC0.31□□□□□ -2.36
BLOC1S4Q9NUP1 Y_RNA.65-201ENST00000362846 100 ntBASIC0.3□□□□□ -2.36
BLOC1S4Q9NUP1 SNORD44.1-201ENST00000363202 61 ntBASIC0.3□□□□□ -2.36
BLOC1S4Q9NUP1 SNORD114-23-201ENST00000363536 72 ntBASIC0.3□□□□□ -2.36
BLOC1S4Q9NUP1 RNU6-694P-201ENST00000364071 147 ntBASIC0.3□□□□□ -2.36
BLOC1S4Q9NUP1 Y_RNA.350-201ENST00000365409 98 ntBASIC0.3□□□□□ -2.36
BLOC1S4Q9NUP1 RNU6-597P-201ENST00000365620 102 ntBASIC0.29□□□□□ -2.36
BLOC1S4Q9NUP1 Y_RNA.588-201ENST00000391254 102 ntBASIC0.29□□□□□ -2.36
BLOC1S4Q9NUP1 MTND2P23-201ENST00000422990 651 ntBASIC0.29□□□□□ -2.36
BLOC1S4Q9NUP1 SNRPGP12-201ENST00000449481 213 ntBASIC0.29□□□□□ -2.36
BLOC1S4Q9NUP1 MIR4491-201ENST00000581087 68 ntBASIC0.29□□□□□ -2.36
BLOC1S4Q9NUP1 RNU6-923P-201ENST00000364753 107 ntBASIC0.28□□□□□ -2.36
BLOC1S4Q9NUP1 SNORA72.6-201ENST00000384520 129 ntBASIC0.28□□□□□ -2.36
BLOC1S4Q9NUP1 Y_RNA.521-201ENST00000384560 114 ntBASIC0.28□□□□□ -2.36
BLOC1S4Q9NUP1 RNY1P4-201ENST00000384595 115 ntBASIC0.28□□□□□ -2.36
BLOC1S4Q9NUP1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.28□□□□□ -2.36
BLOC1S4Q9NUP1 AC108740.1-201ENST00000498629 225 ntBASIC0.28□□□□□ -2.36
BLOC1S4Q9NUP1 Y_RNA.668-201ENST00000516233 93 ntBASIC0.28□□□□□ -2.36
BLOC1S4Q9NUP1 SNORA25.18-201ENST00000607153 114 ntBASIC0.28□□□□□ -2.36
BLOC1S4Q9NUP1 Y_RNA.75-201ENST00000362927 97 ntBASIC0.27□□□□□ -2.37
BLOC1S4Q9NUP1 RNU6-1229P-201ENST00000364295 107 ntBASIC0.27□□□□□ -2.37
BLOC1S4Q9NUP1 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.27□□□□□ -2.37
BLOC1S4Q9NUP1 RN7SL793P-201ENST00000583259 296 ntBASIC0.27□□□□□ -2.37
BLOC1S4Q9NUP1 RNA5SP62-201ENST00000363457 110 ntBASIC0.26□□□□□ -2.37
BLOC1S4Q9NUP1 RNU4-16P-201ENST00000364737 141 ntBASIC0.26□□□□□ -2.37
BLOC1S4Q9NUP1 Y_RNA.393-201ENST00000383936 102 ntBASIC0.26□□□□□ -2.37
BLOC1S4Q9NUP1 MIR613-201ENST00000385248 95 ntBASIC0.26□□□□□ -2.37
BLOC1S4Q9NUP1 AL022718.1-201ENST00000412004 84 ntBASIC0.26□□□□□ -2.37
BLOC1S4Q9NUP1 RNU6-1194P-201ENST00000516208 104 ntBASIC0.26□□□□□ -2.37
BLOC1S4Q9NUP1 RNU6-327P-201ENST00000516270 127 ntBASIC0.26□□□□□ -2.37
BLOC1S4Q9NUP1 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.26□□□□□ -2.37
BLOC1S4Q9NUP1 Y_RNA.757-201ENST00000578934 114 ntBASIC0.26□□□□□ -2.37
BLOC1S4Q9NUP1 MIR4308-201ENST00000580634 81 ntBASIC0.26□□□□□ -2.37
BLOC1S4Q9NUP1 AC062037.2-201ENST00000610137 73 ntBASIC0.26□□□□□ -2.37
BLOC1S4Q9NUP1 MTND5P32-201ENST00000560711 1802 ntBASIC0.25□□□□□ -2.37
BLOC1S4Q9NUP1 RNY1P13-201ENST00000365030 105 ntBASIC0.25□□□□□ -2.37
BLOC1S4Q9NUP1 Y_RNA.539-201ENST00000384635 107 ntBASIC0.25□□□□□ -2.37
BLOC1S4Q9NUP1 RNU2-59P-201ENST00000410482 191 ntBASIC0.25□□□□□ -2.37
BLOC1S4Q9NUP1 Y_RNA.617-201ENST00000410920 90 ntBASIC0.25□□□□□ -2.37
BLOC1S4Q9NUP1 MRPS18CP4-201ENST00000535821 231 ntBASIC0.25□□□□□ -2.37
BLOC1S4Q9NUP1 MIR103A1-201ENST00000362165 78 ntBASIC0.24□□□□□ -2.37
BLOC1S4Q9NUP1 RNU6-349P-201ENST00000362402 107 ntBASIC0.24□□□□□ -2.37
BLOC1S4Q9NUP1 Y_RNA.133-201ENST00000363428 110 ntBASIC0.24□□□□□ -2.37
BLOC1S4Q9NUP1 Y_RNA.536-201ENST00000384621 113 ntBASIC0.24□□□□□ -2.37
BLOC1S4Q9NUP1 Y_RNA.697-201ENST00000516776 113 ntBASIC0.24□□□□□ -2.37
BLOC1S4Q9NUP1 RNA5SP268-201ENST00000516828 124 ntBASIC0.24□□□□□ -2.37
BLOC1S4Q9NUP1 MIR4431-201ENST00000579990 94 ntBASIC0.24□□□□□ -2.37
BLOC1S4Q9NUP1 Y_RNA.435-201ENST00000384095 112 ntBASIC0.23□□□□□ -2.37
BLOC1S4Q9NUP1 MIR644A-201ENST00000385262 94 ntBASIC0.23□□□□□ -2.37
BLOC1S4Q9NUP1 RNA5SP144-201ENST00000410846 116 ntBASIC0.23□□□□□ -2.37
BLOC1S4Q9NUP1 RNU7-113P-201ENST00000459273 62 ntBASIC0.23□□□□□ -2.37
BLOC1S4Q9NUP1 RNU6-1045P-201ENST00000516321 107 ntBASIC0.23□□□□□ -2.37
BLOC1S4Q9NUP1 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
BLOC1S4Q9NUP1 Y_RNA.477-201ENST00000384352 108 ntBASIC0.22□□□□□ -2.37
BLOC1S4Q9NUP1 RNU6-535P-201ENST00000384722 107 ntBASIC0.22□□□□□ -2.37
BLOC1S4Q9NUP1 RNU7-79P-201ENST00000516082 62 ntBASIC0.22□□□□□ -2.37
BLOC1S4Q9NUP1 RNU6-1023P-201ENST00000516137 106 ntBASIC0.22□□□□□ -2.37
BLOC1S4Q9NUP1 SNORA31.14-201ENST00000516728 116 ntBASIC0.22□□□□□ -2.37
BLOC1S4Q9NUP1 AC011603.4-201ENST00000611325 277 ntBASIC0.22□□□□□ -2.37
BLOC1S4Q9NUP1 U4.1-201ENST00000620349 87 ntBASIC0.22□□□□□ -2.37
BLOC1S4Q9NUP1 AC078938.1-201ENST00000620993 318 ntBASIC0.22□□□□□ -2.37
BLOC1S4Q9NUP1 MIR4315-1-201ENST00000636800 73 ntBASIC0.22□□□□□ -2.37
BLOC1S4Q9NUP1 AC010487.4-201ENST00000637027 61 ntBASIC0.22□□□□□ -2.37
BLOC1S4Q9NUP1 MIR4315-2-201ENST00000640925 73 ntBASIC0.22□□□□□ -2.37
BLOC1S4Q9NUP1 Y_RNA.32-201ENST00000362589 110 ntBASIC0.21□□□□□ -2.38
BLOC1S4Q9NUP1 RNU4-58P-201ENST00000363192 141 ntBASIC0.21□□□□□ -2.38
BLOC1S4Q9NUP1 SNORA36.1-201ENST00000363424 132 ntBASIC0.21□□□□□ -2.38
BLOC1S4Q9NUP1 SNORA20.1-201ENST00000364790 130 ntBASIC0.21□□□□□ -2.38
BLOC1S4Q9NUP1 Y_RNA.412-201ENST00000384001 104 ntBASIC0.21□□□□□ -2.38
BLOC1S4Q9NUP1 AC096949.1-201ENST00000412047 152 ntBASIC0.21□□□□□ -2.38
BLOC1S4Q9NUP1 AC073261.1-201ENST00000429409 121 ntBASIC0.21□□□□□ -2.38
BLOC1S4Q9NUP1 MTATP6P21-201ENST00000440681 189 ntBASIC0.21□□□□□ -2.38
BLOC1S4Q9NUP1 AC107027.2-201ENST00000512197 115 ntBASIC0.21□□□□□ -2.38
BLOC1S4Q9NUP1 SCARNA16.5-201ENST00000517114 183 ntBASIC0.21□□□□□ -2.38
BLOC1S4Q9NUP1 RNU7-35P-201ENST00000517174 62 ntBASIC0.21□□□□□ -2.38
BLOC1S4Q9NUP1 DEFB131E-201ENST00000532329 154 ntBASIC0.21□□□□□ -2.38
BLOC1S4Q9NUP1 AC112693.2-201ENST00000556538 232 ntBASIC0.21□□□□□ -2.38
BLOC1S4Q9NUP1 MIR4639-201ENST00000584938 69 ntBASIC0.21□□□□□ -2.38
BLOC1S4Q9NUP1 U6.106-201ENST00000636360 105 ntBASIC0.21□□□□□ -2.38
BLOC1S4Q9NUP1 AC091304.10-201ENST00000641554 121 ntBASIC0.21□□□□□ -2.38
BLOC1S4Q9NUP1 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.21□□□□□ -2.38
BLOC1S4Q9NUP1 Y_RNA.36-201ENST00000362602 112 ntBASIC0.2□□□□□ -2.38
BLOC1S4Q9NUP1 Y_RNA.52-201ENST00000362760 96 ntBASIC0.2□□□□□ -2.38
BLOC1S4Q9NUP1 RNU6-291P-201ENST00000384720 107 ntBASIC0.2□□□□□ -2.38
BLOC1S4Q9NUP1 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.2□□□□□ -2.38
BLOC1S4Q9NUP1 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.2□□□□□ -2.38
BLOC1S4Q9NUP1 SNORD115-2-201ENST00000362842 82 ntBASIC0.19□□□□□ -2.38
BLOC1S4Q9NUP1 RNU6-312P-201ENST00000364629 107 ntBASIC0.19□□□□□ -2.38
BLOC1S4Q9NUP1 SNORD115-20-201ENST00000365099 82 ntBASIC0.19□□□□□ -2.38
BLOC1S4Q9NUP1 MIR193B-201ENST00000384907 83 ntBASIC0.19□□□□□ -2.38
BLOC1S4Q9NUP1 MIRLET7F2-201ENST00000385277 83 ntBASIC0.19□□□□□ -2.38
BLOC1S4Q9NUP1 AL118496.2-201ENST00000448300 230 ntBASIC0.19□□□□□ -2.38
BLOC1S4Q9NUP1 MIR3128-201ENST00000581957 66 ntBASIC0.19□□□□□ -2.38
BLOC1S4Q9NUP1 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.19□□□□□ -2.38
BLOC1S4Q9NUP1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.19□□□□□ -2.38
BLOC1S4Q9NUP1 MIR6828-201ENST00000636181 60 ntBASIC0.19□□□□□ -2.38
BLOC1S4Q9NUP1 Y_RNA.162-201ENST00000363683 102 ntBASIC0.18□□□□□ -2.38
BLOC1S4Q9NUP1 Y_RNA.171-201ENST00000363760 102 ntBASIC0.18□□□□□ -2.38
BLOC1S4Q9NUP1 Y_RNA.337-201ENST00000365312 102 ntBASIC0.18□□□□□ -2.38
BLOC1S4Q9NUP1 RNU6-848P-201ENST00000515948 107 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 224.2 ms