Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 Y_RNA.697-201ENST00000516776 113 ntBASIC0.11□□□□□ -2.39
CCL28Q9NRJ3 SCARNA16.5-201ENST00000517114 183 ntBASIC0.11□□□□□ -2.39
CCL28Q9NRJ3 AC069113.3-201ENST00000521019 150 ntBASIC0.11□□□□□ -2.39
CCL28Q9NRJ3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.11□□□□□ -2.39
CCL28Q9NRJ3 AC022709.1-201ENST00000615967 87 ntBASIC0.11□□□□□ -2.39
CCL28Q9NRJ3 Y_RNA.182-201ENST00000363880 111 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 RNU6-923P-201ENST00000364753 107 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 RNU6-275P-201ENST00000364910 107 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 RNU6-815P-201ENST00000384080 113 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 Y_RNA.459-201ENST00000384251 102 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 RNU6-738P-201ENST00000384531 106 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 RNU6-535P-201ENST00000384722 107 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 SNORA25.16-201ENST00000516741 121 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 MIR4308-201ENST00000580634 81 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 MIR7107-201ENST00000611489 80 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 MIR6828-201ENST00000636181 60 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 MIR4315-1-201ENST00000636800 73 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 MIR4315-2-201ENST00000640925 73 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 AL589743.1-201ENST00000551932 2712 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 MTND5P32-201ENST00000560711 1802 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 SNORD114-23-201ENST00000363536 72 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 SNORD27-201ENST00000363981 72 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 RNU4-70P-201ENST00000384579 139 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.556-201ENST00000384677 113 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 MIR518E-201ENST00000385252 88 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 SNORD58.1-201ENST00000391313 66 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 RNA5SP144-201ENST00000410846 116 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 MTND2P23-201ENST00000422990 651 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 AL358176.2-201ENST00000425769 204 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 SUMO1P3-201ENST00000439961 304 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 RNA5SP227-201ENST00000516184 113 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 RNU6-1258P-201ENST00000516911 111 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 RNA5SP47-201ENST00000517230 109 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 MRPS18CP4-201ENST00000535821 231 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 MTND5P34-201ENST00000568888 325 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 MIR4639-201ENST00000584938 69 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.171-201ENST00000363760 102 ntBASIC0.08□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.269-201ENST00000364685 89 ntBASIC0.08□□□□□ -2.4
CCL28Q9NRJ3 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.626-201ENST00000411288 95 ntBASIC0.08□□□□□ -2.4
CCL28Q9NRJ3 RNU7-79P-201ENST00000516082 62 ntBASIC0.08□□□□□ -2.4
CCL28Q9NRJ3 RNU6-1194P-201ENST00000516208 104 ntBASIC0.08□□□□□ -2.4
CCL28Q9NRJ3 RNU7-35P-201ENST00000517174 62 ntBASIC0.08□□□□□ -2.4
CCL28Q9NRJ3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.08□□□□□ -2.4
CCL28Q9NRJ3 MIR924-201ENST00000638017 53 ntBASIC0.08□□□□□ -2.4
CCL28Q9NRJ3 AC091304.10-201ENST00000641554 121 ntBASIC0.08□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.20-201ENST00000362479 113 ntBASIC0.07□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.65-201ENST00000362846 100 ntBASIC0.07□□□□□ -2.4
CCL28Q9NRJ3 SNORD28-201ENST00000384706 75 ntBASIC0.07□□□□□ -2.4
CCL28Q9NRJ3 AL022718.1-201ENST00000412004 84 ntBASIC0.07□□□□□ -2.4
CCL28Q9NRJ3 RNU7-113P-201ENST00000459273 62 ntBASIC0.07□□□□□ -2.4
CCL28Q9NRJ3 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.07□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.52-201ENST00000362760 96 ntBASIC0.06□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.75-201ENST00000362927 97 ntBASIC0.06□□□□□ -2.4
CCL28Q9NRJ3 RNU4-58P-201ENST00000363192 141 ntBASIC0.06□□□□□ -2.4
CCL28Q9NRJ3 SNORA42.1-201ENST00000363515 137 ntBASIC0.06□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.412-201ENST00000384001 104 ntBASIC0.06□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.478-201ENST00000384358 107 ntBASIC0.06□□□□□ -2.4
CCL28Q9NRJ3 MTCYBP9-201ENST00000431021 303 ntBASIC0.06□□□□□ -2.4
CCL28Q9NRJ3 AC069271.1-201ENST00000445577 156 ntBASIC0.06□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.668-201ENST00000516233 93 ntBASIC0.06□□□□□ -2.4
CCL28Q9NRJ3 DEFB131E-201ENST00000532329 154 ntBASIC0.06□□□□□ -2.4
CCL28Q9NRJ3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.06□□□□□ -2.4
CCL28Q9NRJ3 SNORA9.1-201ENST00000362412 131 ntBASIC0.05□□□□□ -2.4
CCL28Q9NRJ3 RNU6-1336P-201ENST00000383886 109 ntBASIC0.05□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.470-201ENST00000384307 117 ntBASIC0.05□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.477-201ENST00000384352 108 ntBASIC0.05□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.521-201ENST00000384560 114 ntBASIC0.05□□□□□ -2.4
CCL28Q9NRJ3 MIR598-201ENST00000384868 97 ntBASIC0.05□□□□□ -2.4
CCL28Q9NRJ3 MIR1302-3-201ENST00000408128 138 ntBASIC0.05□□□□□ -2.4
CCL28Q9NRJ3 RNA5SP236-201ENST00000516169 116 ntBASIC0.05□□□□□ -2.4
CCL28Q9NRJ3 RNU4-71P-201ENST00000516258 113 ntBASIC0.05□□□□□ -2.4
CCL28Q9NRJ3 RNU6-531P-201ENST00000516694 104 ntBASIC0.05□□□□□ -2.4
CCL28Q9NRJ3 AL360085.1-201ENST00000604713 532 ntBASIC0.05□□□□□ -2.4
CCL28Q9NRJ3 MIR6755-201ENST00000619993 66 ntBASIC0.05□□□□□ -2.4
CCL28Q9NRJ3 SNORD115-2-201ENST00000362842 82 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 RNA5SP133-201ENST00000363368 119 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 SNORD115-20-201ENST00000365099 82 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.350-201ENST00000365409 98 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.393-201ENST00000383936 102 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 RNU6-1126P-201ENST00000384002 107 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 RNU6-1011P-201ENST00000384668 107 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 MIRLET7F2-201ENST00000385277 83 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.673-201ENST00000516306 88 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 RNA5SP33-201ENST00000516687 98 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 TUG1_4.1-201ENST00000619464 181 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 AC244669.1-204ENST00000621564 178 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 U6.106-201ENST00000636360 105 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.03□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.120-201ENST00000363304 110 ntBASIC0.03□□□□□ -2.4
CCL28Q9NRJ3 RNY1-201ENST00000364228 113 ntBASIC0.03□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.423-201ENST00000384057 113 ntBASIC0.03□□□□□ -2.4
CCL28Q9NRJ3 RNA5SP299-201ENST00000391203 116 ntBASIC0.03□□□□□ -2.4
CCL28Q9NRJ3 RNU6-848P-201ENST00000515948 107 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 289.1 ms