Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 Y_RNA.697-201ENST00000516776 113 ntBASIC0.11□□□□□ -2.39
CCL28Q9NRJ3 SCARNA16.5-201ENST00000517114 183 ntBASIC0.11□□□□□ -2.39
CCL28Q9NRJ3 AC069113.3-201ENST00000521019 150 ntBASIC0.11□□□□□ -2.39
CCL28Q9NRJ3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.11□□□□□ -2.39
CCL28Q9NRJ3 AC022709.1-201ENST00000615967 87 ntBASIC0.11□□□□□ -2.39
CCL28Q9NRJ3 Y_RNA.182-201ENST00000363880 111 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 RNU6-923P-201ENST00000364753 107 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 RNU6-275P-201ENST00000364910 107 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 RNU6-815P-201ENST00000384080 113 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 Y_RNA.459-201ENST00000384251 102 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 RNU6-738P-201ENST00000384531 106 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 RNU6-535P-201ENST00000384722 107 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 SNORA25.16-201ENST00000516741 121 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 MIR4308-201ENST00000580634 81 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 MIR7107-201ENST00000611489 80 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 MIR6828-201ENST00000636181 60 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 MIR4315-1-201ENST00000636800 73 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 MIR4315-2-201ENST00000640925 73 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 AL589743.1-201ENST00000551932 2712 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 MTND5P32-201ENST00000560711 1802 ntBASIC0.1□□□□□ -2.39
CCL28Q9NRJ3 SNORD114-23-201ENST00000363536 72 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 SNORD27-201ENST00000363981 72 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 RNU4-70P-201ENST00000384579 139 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.556-201ENST00000384677 113 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 MIR518E-201ENST00000385252 88 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 SNORD58.1-201ENST00000391313 66 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 RNA5SP144-201ENST00000410846 116 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 MTND2P23-201ENST00000422990 651 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 AL358176.2-201ENST00000425769 204 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 SUMO1P3-201ENST00000439961 304 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 RNA5SP227-201ENST00000516184 113 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 RNU6-1258P-201ENST00000516911 111 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 RNA5SP47-201ENST00000517230 109 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 MRPS18CP4-201ENST00000535821 231 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 MTND5P34-201ENST00000568888 325 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 MIR4639-201ENST00000584938 69 ntBASIC0.09□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.171-201ENST00000363760 102 ntBASIC0.08□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.269-201ENST00000364685 89 ntBASIC0.08□□□□□ -2.4
CCL28Q9NRJ3 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.626-201ENST00000411288 95 ntBASIC0.08□□□□□ -2.4
CCL28Q9NRJ3 RNU7-79P-201ENST00000516082 62 ntBASIC0.08□□□□□ -2.4
CCL28Q9NRJ3 RNU6-1194P-201ENST00000516208 104 ntBASIC0.08□□□□□ -2.4
CCL28Q9NRJ3 RNU7-35P-201ENST00000517174 62 ntBASIC0.08□□□□□ -2.4
CCL28Q9NRJ3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.08□□□□□ -2.4
CCL28Q9NRJ3 MIR924-201ENST00000638017 53 ntBASIC0.08□□□□□ -2.4
CCL28Q9NRJ3 AC091304.10-201ENST00000641554 121 ntBASIC0.08□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.20-201ENST00000362479 113 ntBASIC0.07□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.65-201ENST00000362846 100 ntBASIC0.07□□□□□ -2.4
CCL28Q9NRJ3 SNORD28-201ENST00000384706 75 ntBASIC0.07□□□□□ -2.4
CCL28Q9NRJ3 AL022718.1-201ENST00000412004 84 ntBASIC0.07□□□□□ -2.4
CCL28Q9NRJ3 RNU7-113P-201ENST00000459273 62 ntBASIC0.07□□□□□ -2.4
CCL28Q9NRJ3 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.07□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.52-201ENST00000362760 96 ntBASIC0.06□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.75-201ENST00000362927 97 ntBASIC0.06□□□□□ -2.4
CCL28Q9NRJ3 RNU4-58P-201ENST00000363192 141 ntBASIC0.06□□□□□ -2.4
CCL28Q9NRJ3 SNORA42.1-201ENST00000363515 137 ntBASIC0.06□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.412-201ENST00000384001 104 ntBASIC0.06□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.478-201ENST00000384358 107 ntBASIC0.06□□□□□ -2.4
CCL28Q9NRJ3 MTCYBP9-201ENST00000431021 303 ntBASIC0.06□□□□□ -2.4
CCL28Q9NRJ3 AC069271.1-201ENST00000445577 156 ntBASIC0.06□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.668-201ENST00000516233 93 ntBASIC0.06□□□□□ -2.4
CCL28Q9NRJ3 DEFB131E-201ENST00000532329 154 ntBASIC0.06□□□□□ -2.4
CCL28Q9NRJ3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.06□□□□□ -2.4
CCL28Q9NRJ3 SNORA9.1-201ENST00000362412 131 ntBASIC0.05□□□□□ -2.4
CCL28Q9NRJ3 RNU6-1336P-201ENST00000383886 109 ntBASIC0.05□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.470-201ENST00000384307 117 ntBASIC0.05□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.477-201ENST00000384352 108 ntBASIC0.05□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.521-201ENST00000384560 114 ntBASIC0.05□□□□□ -2.4
CCL28Q9NRJ3 MIR598-201ENST00000384868 97 ntBASIC0.05□□□□□ -2.4
CCL28Q9NRJ3 MIR1302-3-201ENST00000408128 138 ntBASIC0.05□□□□□ -2.4
CCL28Q9NRJ3 RNA5SP236-201ENST00000516169 116 ntBASIC0.05□□□□□ -2.4
CCL28Q9NRJ3 RNU4-71P-201ENST00000516258 113 ntBASIC0.05□□□□□ -2.4
CCL28Q9NRJ3 RNU6-531P-201ENST00000516694 104 ntBASIC0.05□□□□□ -2.4
CCL28Q9NRJ3 AL360085.1-201ENST00000604713 532 ntBASIC0.05□□□□□ -2.4
CCL28Q9NRJ3 MIR6755-201ENST00000619993 66 ntBASIC0.05□□□□□ -2.4
CCL28Q9NRJ3 SNORD115-2-201ENST00000362842 82 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 RNA5SP133-201ENST00000363368 119 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 SNORD115-20-201ENST00000365099 82 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.350-201ENST00000365409 98 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.393-201ENST00000383936 102 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 RNU6-1126P-201ENST00000384002 107 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 RNU6-1011P-201ENST00000384668 107 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 MIRLET7F2-201ENST00000385277 83 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.673-201ENST00000516306 88 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 RNA5SP33-201ENST00000516687 98 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 TUG1_4.1-201ENST00000619464 181 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 AC244669.1-204ENST00000621564 178 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 U6.106-201ENST00000636360 105 ntBASIC0.04□□□□□ -2.4
CCL28Q9NRJ3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.03□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.120-201ENST00000363304 110 ntBASIC0.03□□□□□ -2.4
CCL28Q9NRJ3 RNY1-201ENST00000364228 113 ntBASIC0.03□□□□□ -2.4
CCL28Q9NRJ3 Y_RNA.423-201ENST00000384057 113 ntBASIC0.03□□□□□ -2.4
CCL28Q9NRJ3 RNA5SP299-201ENST00000391203 116 ntBASIC0.03□□□□□ -2.4
CCL28Q9NRJ3 RNU6-848P-201ENST00000515948 107 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms