Protein–RNA interactions for Protein: Q9NQ69

LHX9, LIM/homeobox protein Lhx9, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9Q9NQ69 MIR3152-201ENST00000579801 74 ntBASIC0.33□□□□□ -2.36
LHX9Q9NQ69 Z83818.1-201ENST00000603584 150 ntBASIC0.33□□□□□ -2.36
LHX9Q9NQ69 U4.1-201ENST00000620349 87 ntBASIC0.33□□□□□ -2.36
LHX9Q9NQ69 AC099654.10-201ENST00000640395 161 ntBASIC0.33□□□□□ -2.36
LHX9Q9NQ69 MTND5P32-201ENST00000560711 1802 ntBASIC0.33□□□□□ -2.36
LHX9Q9NQ69 Y_RNA.430-201ENST00000384081 110 ntBASIC0.32□□□□□ -2.36
LHX9Q9NQ69 U8.15-201ENST00000390947 134 ntBASIC0.32□□□□□ -2.36
LHX9Q9NQ69 RNU4-83P-201ENST00000410863 133 ntBASIC0.32□□□□□ -2.36
LHX9Q9NQ69 AC002350.1-201ENST00000490759 375 ntBASIC0.32□□□□□ -2.36
LHX9Q9NQ69 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.32□□□□□ -2.36
LHX9Q9NQ69 MRPS18CP4-201ENST00000535821 231 ntBASIC0.32□□□□□ -2.36
LHX9Q9NQ69 AC141846.1-201ENST00000568348 142 ntBASIC0.32□□□□□ -2.36
LHX9Q9NQ69 MIR6841-201ENST00000637129 72 ntBASIC0.32□□□□□ -2.36
LHX9Q9NQ69 RNU6-403P-201ENST00000363163 104 ntBASIC0.31□□□□□ -2.36
LHX9Q9NQ69 SNORA20.1-201ENST00000364790 130 ntBASIC0.31□□□□□ -2.36
LHX9Q9NQ69 RNU6-275P-201ENST00000364910 107 ntBASIC0.31□□□□□ -2.36
LHX9Q9NQ69 RNU6-702P-201ENST00000364982 107 ntBASIC0.31□□□□□ -2.36
LHX9Q9NQ69 RNU6-47P-201ENST00000383866 107 ntBASIC0.31□□□□□ -2.36
LHX9Q9NQ69 MIR624-201ENST00000385217 97 ntBASIC0.31□□□□□ -2.36
LHX9Q9NQ69 SNORD100-201ENST00000408573 76 ntBASIC0.31□□□□□ -2.36
LHX9Q9NQ69 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.31□□□□□ -2.36
LHX9Q9NQ69 RNU4-71P-201ENST00000516258 113 ntBASIC0.31□□□□□ -2.36
LHX9Q9NQ69 RNU6-1258P-201ENST00000516911 111 ntBASIC0.31□□□□□ -2.36
LHX9Q9NQ69 MIR8066-201ENST00000617280 78 ntBASIC0.31□□□□□ -2.36
LHX9Q9NQ69 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.31□□□□□ -2.36
LHX9Q9NQ69 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
LHX9Q9NQ69 Y_RNA.13-201ENST00000362403 112 ntBASIC0.3□□□□□ -2.36
LHX9Q9NQ69 Y_RNA.171-201ENST00000363760 102 ntBASIC0.3□□□□□ -2.36
LHX9Q9NQ69 Y_RNA.193-201ENST00000363979 102 ntBASIC0.3□□□□□ -2.36
LHX9Q9NQ69 RNA5SP517-201ENST00000364724 117 ntBASIC0.3□□□□□ -2.36
LHX9Q9NQ69 RNU6-716P-201ENST00000365621 103 ntBASIC0.3□□□□□ -2.36
LHX9Q9NQ69 RNU6-196P-201ENST00000384315 107 ntBASIC0.3□□□□□ -2.36
LHX9Q9NQ69 Y_RNA.478-201ENST00000384358 107 ntBASIC0.3□□□□□ -2.36
LHX9Q9NQ69 SNORA18-201ENST00000384416 132 ntBASIC0.3□□□□□ -2.36
LHX9Q9NQ69 Y_RNA.521-201ENST00000384560 114 ntBASIC0.3□□□□□ -2.36
LHX9Q9NQ69 RNU6-918P-201ENST00000391219 106 ntBASIC0.3□□□□□ -2.36
LHX9Q9NQ69 MIR1197-201ENST00000408818 88 ntBASIC0.3□□□□□ -2.36
LHX9Q9NQ69 RNU6-1023P-201ENST00000516137 106 ntBASIC0.3□□□□□ -2.36
LHX9Q9NQ69 RNU6-448P-201ENST00000517052 107 ntBASIC0.3□□□□□ -2.36
LHX9Q9NQ69 AC092634.7-201ENST00000621022 103 ntBASIC0.3□□□□□ -2.36
LHX9Q9NQ69 Y_RNA.42-201ENST00000362660 108 ntBASIC0.29□□□□□ -2.36
LHX9Q9NQ69 SNORA25.7-201ENST00000364375 127 ntBASIC0.29□□□□□ -2.36
LHX9Q9NQ69 RNA5SP117-201ENST00000365294 118 ntBASIC0.29□□□□□ -2.36
LHX9Q9NQ69 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.29□□□□□ -2.36
LHX9Q9NQ69 RN7SKP12-201ENST00000516275 143 ntBASIC0.29□□□□□ -2.36
LHX9Q9NQ69 RNA5SP94-201ENST00000516917 108 ntBASIC0.29□□□□□ -2.36
LHX9Q9NQ69 AC022559.1-201ENST00000520905 205 ntBASIC0.29□□□□□ -2.36
LHX9Q9NQ69 MIR3678-201ENST00000578455 94 ntBASIC0.29□□□□□ -2.36
LHX9Q9NQ69 Y_RNA.757-201ENST00000578934 114 ntBASIC0.29□□□□□ -2.36
LHX9Q9NQ69 MIR3149-201ENST00000584629 83 ntBASIC0.29□□□□□ -2.36
LHX9Q9NQ69 AL109933.3-201ENST00000619095 188 ntBASIC0.29□□□□□ -2.36
LHX9Q9NQ69 MIR411-201ENST00000362239 96 ntBASIC0.28□□□□□ -2.36
LHX9Q9NQ69 Y_RNA.52-201ENST00000362760 96 ntBASIC0.28□□□□□ -2.36
LHX9Q9NQ69 Y_RNA.75-201ENST00000362927 97 ntBASIC0.28□□□□□ -2.36
LHX9Q9NQ69 Y_RNA.83-201ENST00000363005 113 ntBASIC0.28□□□□□ -2.36
LHX9Q9NQ69 RNU6-1082P-201ENST00000364574 107 ntBASIC0.28□□□□□ -2.36
LHX9Q9NQ69 RNU4-45P-201ENST00000365469 141 ntBASIC0.28□□□□□ -2.36
LHX9Q9NQ69 SNORA72.6-201ENST00000384520 129 ntBASIC0.28□□□□□ -2.36
LHX9Q9NQ69 RNU6-768P-201ENST00000384683 107 ntBASIC0.28□□□□□ -2.36
LHX9Q9NQ69 MIR644A-201ENST00000385262 94 ntBASIC0.28□□□□□ -2.36
LHX9Q9NQ69 Y_RNA.588-201ENST00000391254 102 ntBASIC0.28□□□□□ -2.36
LHX9Q9NQ69 AC096949.1-201ENST00000412047 152 ntBASIC0.28□□□□□ -2.36
LHX9Q9NQ69 SNORA25.12-201ENST00000516202 82 ntBASIC0.28□□□□□ -2.36
LHX9Q9NQ69 SNORA62.5-201ENST00000516634 120 ntBASIC0.28□□□□□ -2.36
LHX9Q9NQ69 AC133485.4-201ENST00000561835 220 ntBASIC0.28□□□□□ -2.36
LHX9Q9NQ69 MIR4491-201ENST00000581087 68 ntBASIC0.28□□□□□ -2.36
LHX9Q9NQ69 MIR4514-201ENST00000581410 57 ntBASIC0.28□□□□□ -2.36
LHX9Q9NQ69 SNORA25.18-201ENST00000607153 114 ntBASIC0.28□□□□□ -2.36
LHX9Q9NQ69 Y_RNA.200-201ENST00000364018 102 ntBASIC0.27□□□□□ -2.37
LHX9Q9NQ69 RNY1P13-201ENST00000365030 105 ntBASIC0.27□□□□□ -2.37
LHX9Q9NQ69 RNY1P6-201ENST00000384193 109 ntBASIC0.27□□□□□ -2.37
LHX9Q9NQ69 Y_RNA.452-201ENST00000384202 108 ntBASIC0.27□□□□□ -2.37
LHX9Q9NQ69 RNU6-1219P-201ENST00000516143 112 ntBASIC0.27□□□□□ -2.37
LHX9Q9NQ69 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.27□□□□□ -2.37
LHX9Q9NQ69 AL353621.2-201ENST00000605340 133 ntBASIC0.27□□□□□ -2.37
LHX9Q9NQ69 MIR6082-201ENST00000613604 109 ntBASIC0.27□□□□□ -2.37
LHX9Q9NQ69 MIR103A1-201ENST00000362165 78 ntBASIC0.26□□□□□ -2.37
LHX9Q9NQ69 MIRLET7D-201ENST00000362263 87 ntBASIC0.26□□□□□ -2.37
LHX9Q9NQ69 Y_RNA.30-201ENST00000362572 97 ntBASIC0.26□□□□□ -2.37
LHX9Q9NQ69 RNU6-949P-201ENST00000384040 107 ntBASIC0.26□□□□□ -2.37
LHX9Q9NQ69 Y_RNA.470-201ENST00000384307 117 ntBASIC0.26□□□□□ -2.37
LHX9Q9NQ69 Y_RNA.567-201ENST00000384736 106 ntBASIC0.26□□□□□ -2.37
LHX9Q9NQ69 SNORA25.16-201ENST00000516741 121 ntBASIC0.26□□□□□ -2.37
LHX9Q9NQ69 AC130289.1-201ENST00000577321 73 ntBASIC0.26□□□□□ -2.37
LHX9Q9NQ69 MIR4431-201ENST00000579990 94 ntBASIC0.26□□□□□ -2.37
LHX9Q9NQ69 AC023932.2-201ENST00000603176 175 ntBASIC0.26□□□□□ -2.37
LHX9Q9NQ69 RNU6-349P-201ENST00000362402 107 ntBASIC0.25□□□□□ -2.37
LHX9Q9NQ69 Y_RNA.85-201ENST00000363014 111 ntBASIC0.25□□□□□ -2.37
LHX9Q9NQ69 RNU6-1020P-201ENST00000363684 107 ntBASIC0.25□□□□□ -2.37
LHX9Q9NQ69 Y_RNA.274-201ENST00000364714 101 ntBASIC0.25□□□□□ -2.37
LHX9Q9NQ69 SNORA32-201ENST00000384072 121 ntBASIC0.25□□□□□ -2.37
LHX9Q9NQ69 RNA5SP144-201ENST00000410846 116 ntBASIC0.25□□□□□ -2.37
LHX9Q9NQ69 RNU6-1086P-201ENST00000410930 100 ntBASIC0.25□□□□□ -2.37
LHX9Q9NQ69 MTND5P34-201ENST00000568888 325 ntBASIC0.25□□□□□ -2.37
LHX9Q9NQ69 MIR4719-201ENST00000585233 84 ntBASIC0.25□□□□□ -2.37
LHX9Q9NQ69 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.25□□□□□ -2.37
LHX9Q9NQ69 Y_RNA.32-201ENST00000362589 110 ntBASIC0.24□□□□□ -2.37
LHX9Q9NQ69 SNORA36.1-201ENST00000363424 132 ntBASIC0.24□□□□□ -2.37
LHX9Q9NQ69 SNORA8.2-201ENST00000384372 139 ntBASIC0.24□□□□□ -2.37
LHX9Q9NQ69 MIR518A1-201ENST00000385068 85 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms