Protein–RNA interactions for Protein: Q9NP61

ARFGAP3, ADP-ribosylation factor GTPase-activating protein 3, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP3Q9NP61 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.85□□□□□ -2.27
ARFGAP3Q9NP61 RNA5SP222-201ENST00000411039 105 ntBASIC0.85□□□□□ -2.27
ARFGAP3Q9NP61 RNU7-102P-201ENST00000458948 62 ntBASIC0.85□□□□□ -2.27
ARFGAP3Q9NP61 RNU7-113P-201ENST00000459273 62 ntBASIC0.85□□□□□ -2.27
ARFGAP3Q9NP61 RNU7-156P-201ENST00000517214 74 ntBASIC0.85□□□□□ -2.27
ARFGAP3Q9NP61 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.85□□□□□ -2.27
ARFGAP3Q9NP61 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
ARFGAP3Q9NP61 Y_RNA.116-201ENST00000363292 103 ntBASIC0.84□□□□□ -2.27
ARFGAP3Q9NP61 RNU6-151P-201ENST00000364158 107 ntBASIC0.84□□□□□ -2.27
ARFGAP3Q9NP61 MIR518E-201ENST00000385252 88 ntBASIC0.84□□□□□ -2.27
ARFGAP3Q9NP61 RNU6-447P-201ENST00000410293 104 ntBASIC0.84□□□□□ -2.27
ARFGAP3Q9NP61 RNU6-1118P-201ENST00000410382 104 ntBASIC0.84□□□□□ -2.27
ARFGAP3Q9NP61 RNU6-1076P-201ENST00000410397 104 ntBASIC0.84□□□□□ -2.27
ARFGAP3Q9NP61 RNU6-355P-201ENST00000410427 104 ntBASIC0.84□□□□□ -2.27
ARFGAP3Q9NP61 RNU6-791P-201ENST00000410467 104 ntBASIC0.84□□□□□ -2.27
ARFGAP3Q9NP61 RNU6-705P-201ENST00000410601 104 ntBASIC0.84□□□□□ -2.27
ARFGAP3Q9NP61 RNU6-1100P-201ENST00000410691 104 ntBASIC0.84□□□□□ -2.27
ARFGAP3Q9NP61 RNU6-860P-201ENST00000410860 104 ntBASIC0.84□□□□□ -2.27
ARFGAP3Q9NP61 RNU6-1217P-201ENST00000411276 104 ntBASIC0.84□□□□□ -2.27
ARFGAP3Q9NP61 RNU6-785P-201ENST00000411324 104 ntBASIC0.84□□□□□ -2.27
ARFGAP3Q9NP61 RNU6-240P-201ENST00000516098 97 ntBASIC0.84□□□□□ -2.27
ARFGAP3Q9NP61 MIR4653-201ENST00000585107 83 ntBASIC0.84□□□□□ -2.27
ARFGAP3Q9NP61 U6.90-201ENST00000614007 104 ntBASIC0.84□□□□□ -2.27
ARFGAP3Q9NP61 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.84□□□□□ -2.27
ARFGAP3Q9NP61 U6.70-201ENST00000620287 104 ntBASIC0.84□□□□□ -2.27
ARFGAP3Q9NP61 Y_RNA.120-201ENST00000363304 110 ntBASIC0.83□□□□□ -2.28
ARFGAP3Q9NP61 Y_RNA.251-201ENST00000364551 99 ntBASIC0.83□□□□□ -2.28
ARFGAP3Q9NP61 RNU6-1130P-201ENST00000365434 107 ntBASIC0.83□□□□□ -2.28
ARFGAP3Q9NP61 SNORD116-18-201ENST00000383961 92 ntBASIC0.83□□□□□ -2.28
ARFGAP3Q9NP61 RNU6-886P-201ENST00000384319 105 ntBASIC0.83□□□□□ -2.28
ARFGAP3Q9NP61 RNU6-394P-201ENST00000410735 107 ntBASIC0.83□□□□□ -2.28
ARFGAP3Q9NP61 SNORD92-201ENST00000585078 85 ntBASIC0.83□□□□□ -2.28
ARFGAP3Q9NP61 AC008608.1-201ENST00000603910 127 ntBASIC0.83□□□□□ -2.28
ARFGAP3Q9NP61 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.83□□□□□ -2.28
ARFGAP3Q9NP61 Y_RNA.150-201ENST00000363562 102 ntBASIC0.82□□□□□ -2.28
ARFGAP3Q9NP61 Y_RNA.470-201ENST00000384307 117 ntBASIC0.82□□□□□ -2.28
ARFGAP3Q9NP61 U8.15-201ENST00000390947 134 ntBASIC0.82□□□□□ -2.28
ARFGAP3Q9NP61 COX6CP6-201ENST00000490840 228 ntBASIC0.82□□□□□ -2.28
ARFGAP3Q9NP61 Y_RNA.686-201ENST00000516548 134 ntBASIC0.82□□□□□ -2.28
ARFGAP3Q9NP61 Y_RNA.690-201ENST00000516603 95 ntBASIC0.82□□□□□ -2.28
ARFGAP3Q9NP61 AC133485.4-201ENST00000561835 220 ntBASIC0.82□□□□□ -2.28
ARFGAP3Q9NP61 AC138907.4-201ENST00000570107 226 ntBASIC0.82□□□□□ -2.28
ARFGAP3Q9NP61 MIR4305-201ENST00000583252 102 ntBASIC0.82□□□□□ -2.28
ARFGAP3Q9NP61 Y_RNA.778-201ENST00000620203 90 ntBASIC0.82□□□□□ -2.28
ARFGAP3Q9NP61 RNU6-508P-201ENST00000363231 103 ntBASIC0.81□□□□□ -2.28
ARFGAP3Q9NP61 RNU6-309P-201ENST00000364573 106 ntBASIC0.81□□□□□ -2.28
ARFGAP3Q9NP61 RNU6-949P-201ENST00000384040 107 ntBASIC0.81□□□□□ -2.28
ARFGAP3Q9NP61 Y_RNA.555-201ENST00000384673 110 ntBASIC0.81□□□□□ -2.28
ARFGAP3Q9NP61 PCNPP3-201ENST00000393579 471 ntBASIC0.81□□□□□ -2.28
ARFGAP3Q9NP61 RNU4-83P-201ENST00000410863 133 ntBASIC0.81□□□□□ -2.28
ARFGAP3Q9NP61 RNA5SP33-201ENST00000516687 98 ntBASIC0.81□□□□□ -2.28
ARFGAP3Q9NP61 AC021443.1-201ENST00000604478 211 ntBASIC0.81□□□□□ -2.28
ARFGAP3Q9NP61 MIR6857-201ENST00000613267 93 ntBASIC0.81□□□□□ -2.28
ARFGAP3Q9NP61 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.8□□□□□ -2.28
ARFGAP3Q9NP61 Y_RNA.8-201ENST00000362353 102 ntBASIC0.8□□□□□ -2.28
ARFGAP3Q9NP61 SNORA36.2-201ENST00000384004 127 ntBASIC0.8□□□□□ -2.28
ARFGAP3Q9NP61 RNU6-804P-201ENST00000384286 107 ntBASIC0.8□□□□□ -2.28
ARFGAP3Q9NP61 AL603914.1-201ENST00000401964 204 ntBASIC0.8□□□□□ -2.28
ARFGAP3Q9NP61 AL606490.4-201ENST00000423117 127 ntBASIC0.8□□□□□ -2.28
ARFGAP3Q9NP61 AL512326.2-201ENST00000426359 151 ntBASIC0.8□□□□□ -2.28
ARFGAP3Q9NP61 Y_RNA.651-201ENST00000459380 103 ntBASIC0.8□□□□□ -2.28
ARFGAP3Q9NP61 RNU2-35P-201ENST00000516446 142 ntBASIC0.8□□□□□ -2.28
ARFGAP3Q9NP61 MIR3612-201ENST00000579753 87 ntBASIC0.8□□□□□ -2.28
ARFGAP3Q9NP61 RNY1P13-201ENST00000365030 105 ntBASIC0.79□□□□□ -2.28
ARFGAP3Q9NP61 Y_RNA.508-201ENST00000384502 114 ntBASIC0.79□□□□□ -2.28
ARFGAP3Q9NP61 MIR513C-201ENST00000401352 84 ntBASIC0.79□□□□□ -2.28
ARFGAP3Q9NP61 MIR548J-201ENST00000408833 112 ntBASIC0.79□□□□□ -2.28
ARFGAP3Q9NP61 RNU6-1086P-201ENST00000410930 100 ntBASIC0.79□□□□□ -2.28
ARFGAP3Q9NP61 RNU5E-3P-201ENST00000515913 68 ntBASIC0.79□□□□□ -2.28
ARFGAP3Q9NP61 MIR3144-201ENST00000579460 79 ntBASIC0.79□□□□□ -2.28
ARFGAP3Q9NP61 AC090897.1-201ENST00000580909 226 ntBASIC0.79□□□□□ -2.28
ARFGAP3Q9NP61 MIR3668-201ENST00000582138 75 ntBASIC0.79□□□□□ -2.28
ARFGAP3Q9NP61 MIR6866-201ENST00000638146 69 ntBASIC0.79□□□□□ -2.28
ARFGAP3Q9NP61 RNU6-403P-201ENST00000363163 104 ntBASIC0.78□□□□□ -2.28
ARFGAP3Q9NP61 SNORA32-201ENST00000384072 121 ntBASIC0.78□□□□□ -2.28
ARFGAP3Q9NP61 RNU7-164P-201ENST00000459221 62 ntBASIC0.78□□□□□ -2.28
ARFGAP3Q9NP61 RNU7-79P-201ENST00000516082 62 ntBASIC0.78□□□□□ -2.28
ARFGAP3Q9NP61 AC004812.1-201ENST00000540773 146 ntBASIC0.78□□□□□ -2.28
ARFGAP3Q9NP61 AL078603.1-201ENST00000603824 313 ntBASIC0.78□□□□□ -2.28
ARFGAP3Q9NP61 AL589743.1-201ENST00000551932 2712 ntBASIC0.77□□□□□ -2.29
ARFGAP3Q9NP61 SNORD115-2-201ENST00000362842 82 ntBASIC0.77□□□□□ -2.29
ARFGAP3Q9NP61 SNORD115-20-201ENST00000365099 82 ntBASIC0.77□□□□□ -2.29
ARFGAP3Q9NP61 RNY1P8-201ENST00000383970 114 ntBASIC0.77□□□□□ -2.29
ARFGAP3Q9NP61 Y_RNA.531-201ENST00000384589 121 ntBASIC0.77□□□□□ -2.29
ARFGAP3Q9NP61 RNU6-460P-201ENST00000391158 108 ntBASIC0.77□□□□□ -2.29
ARFGAP3Q9NP61 RNU7-197P-201ENST00000458836 62 ntBASIC0.77□□□□□ -2.29
ARFGAP3Q9NP61 RNA5SP220-201ENST00000516298 104 ntBASIC0.77□□□□□ -2.29
ARFGAP3Q9NP61 RNU7-35P-201ENST00000517174 62 ntBASIC0.77□□□□□ -2.29
ARFGAP3Q9NP61 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.77□□□□□ -2.29
ARFGAP3Q9NP61 MIR8066-201ENST00000617280 78 ntBASIC0.77□□□□□ -2.29
ARFGAP3Q9NP61 MIR18A-201ENST00000362310 71 ntBASIC0.76□□□□□ -2.29
ARFGAP3Q9NP61 Y_RNA.180-201ENST00000363867 113 ntBASIC0.76□□□□□ -2.29
ARFGAP3Q9NP61 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.76□□□□□ -2.29
ARFGAP3Q9NP61 snoU13.18-201ENST00000459483 104 ntBASIC0.76□□□□□ -2.29
ARFGAP3Q9NP61 CYP3A137P-201ENST00000562436 69 ntBASIC0.76□□□□□ -2.29
ARFGAP3Q9NP61 MIR548AE2-201ENST00000583456 67 ntBASIC0.76□□□□□ -2.29
ARFGAP3Q9NP61 Y_RNA.13-201ENST00000362403 112 ntBASIC0.75□□□□□ -2.29
ARFGAP3Q9NP61 Y_RNA.42-201ENST00000362660 108 ntBASIC0.75□□□□□ -2.29
ARFGAP3Q9NP61 Y_RNA.355-201ENST00000365462 98 ntBASIC0.75□□□□□ -2.29
ARFGAP3Q9NP61 Y_RNA.366-201ENST00000365540 102 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 267 ms