Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 SNORA25.3-201ENST00000363205 127 ntBASIC1.76□□□□□ -2.13
SEC61A2Q9H9S3 Y_RNA.140-201ENST00000363474 103 ntBASIC1.76□□□□□ -2.13
SEC61A2Q9H9S3 RNY1P13-201ENST00000365030 105 ntBASIC1.76□□□□□ -2.13
SEC61A2Q9H9S3 RNU6-1152P-201ENST00000384576 107 ntBASIC1.76□□□□□ -2.13
SEC61A2Q9H9S3 RNA5SP237-201ENST00000410414 113 ntBASIC1.76□□□□□ -2.13
SEC61A2Q9H9S3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SEC61A2Q9H9S3 RNU6-267P-201ENST00000516714 103 ntBASIC1.76□□□□□ -2.13
SEC61A2Q9H9S3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SEC61A2Q9H9S3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SEC61A2Q9H9S3 SNORD38.1-201ENST00000363863 68 ntBASIC1.75□□□□□ -2.13
SEC61A2Q9H9S3 RNU6-497P-201ENST00000365316 104 ntBASIC1.75□□□□□ -2.13
SEC61A2Q9H9S3 RNA5SP212-201ENST00000391223 107 ntBASIC1.75□□□□□ -2.13
SEC61A2Q9H9S3 MIR1289-2-201ENST00000408360 111 ntBASIC1.75□□□□□ -2.13
SEC61A2Q9H9S3 SPINT5P-201ENST00000448174 155 ntBASIC1.75□□□□□ -2.13
SEC61A2Q9H9S3 AC012493.3-201ENST00000604494 112 ntBASIC1.75□□□□□ -2.13
SEC61A2Q9H9S3 AL096861.1-201ENST00000610899 123 ntBASIC1.75□□□□□ -2.13
SEC61A2Q9H9S3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SEC61A2Q9H9S3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SEC61A2Q9H9S3 SNORD114-10-201ENST00000363409 72 ntBASIC1.74□□□□□ -2.13
SEC61A2Q9H9S3 SNORD58A-201ENST00000383875 65 ntBASIC1.74□□□□□ -2.13
SEC61A2Q9H9S3 SNORD116-22-201ENST00000384430 92 ntBASIC1.74□□□□□ -2.13
SEC61A2Q9H9S3 AC244023.1-201ENST00000426884 112 ntBASIC1.74□□□□□ -2.13
SEC61A2Q9H9S3 snoU13.15-201ENST00000459407 104 ntBASIC1.74□□□□□ -2.13
SEC61A2Q9H9S3 AC141846.1-201ENST00000568348 142 ntBASIC1.74□□□□□ -2.13
SEC61A2Q9H9S3 MIR5089-201ENST00000580047 84 ntBASIC1.74□□□□□ -2.13
SEC61A2Q9H9S3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.74□□□□□ -2.13
SEC61A2Q9H9S3 AC242498.1-201ENST00000604134 111 ntBASIC1.74□□□□□ -2.13
SEC61A2Q9H9S3 PRELID3BP2-201ENST00000605362 201 ntBASIC1.74□□□□□ -2.13
SEC61A2Q9H9S3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.74□□□□□ -2.13
SEC61A2Q9H9S3 AL773524.1-201ENST00000614065 229 ntBASIC1.74□□□□□ -2.13
SEC61A2Q9H9S3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SEC61A2Q9H9S3 RNY1P4-201ENST00000384595 115 ntBASIC1.73□□□□□ -2.13
SEC61A2Q9H9S3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
SEC61A2Q9H9S3 MIR548G-201ENST00000408442 89 ntBASIC1.73□□□□□ -2.13
SEC61A2Q9H9S3 AL445685.2-201ENST00000422551 342 ntBASIC1.73□□□□□ -2.13
SEC61A2Q9H9S3 RPL39P39-201ENST00000455840 151 ntBASIC1.73□□□□□ -2.13
SEC61A2Q9H9S3 RNU7-48P-201ENST00000458875 63 ntBASIC1.73□□□□□ -2.13
SEC61A2Q9H9S3 RNU1-98P-201ENST00000458992 160 ntBASIC1.73□□□□□ -2.13
SEC61A2Q9H9S3 snoU13.26-201ENST00000459452 105 ntBASIC1.73□□□□□ -2.13
SEC61A2Q9H9S3 MIR4287-201ENST00000579398 78 ntBASIC1.73□□□□□ -2.13
SEC61A2Q9H9S3 MIR4439-201ENST00000583746 80 ntBASIC1.73□□□□□ -2.13
SEC61A2Q9H9S3 RNU6-90P-201ENST00000606352 106 ntBASIC1.73□□□□□ -2.13
SEC61A2Q9H9S3 AC131280.1-202ENST00000624067 4211 ntBASIC1.72□□□□□ -2.13
SEC61A2Q9H9S3 RNA5SP48-201ENST00000363969 126 ntBASIC1.72□□□□□ -2.13
SEC61A2Q9H9S3 Y_RNA.567-201ENST00000384736 106 ntBASIC1.72□□□□□ -2.13
SEC61A2Q9H9S3 SNORD78.1-201ENST00000390866 65 ntBASIC1.72□□□□□ -2.13
SEC61A2Q9H9S3 RNU6-1275P-201ENST00000391087 107 ntBASIC1.72□□□□□ -2.13
SEC61A2Q9H9S3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.72□□□□□ -2.13
SEC61A2Q9H9S3 AC244636.1-201ENST00000421152 228 ntBASIC1.72□□□□□ -2.13
SEC61A2Q9H9S3 AC003989.2-201ENST00000440224 169 ntBASIC1.72□□□□□ -2.13
SEC61A2Q9H9S3 MTND5P40-201ENST00000559945 246 ntBASIC1.72□□□□□ -2.13
SEC61A2Q9H9S3 AL662814.1-201ENST00000617364 121 ntBASIC1.72□□□□□ -2.13
SEC61A2Q9H9S3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
SEC61A2Q9H9S3 Y_RNA.98-201ENST00000363109 102 ntBASIC1.71□□□□□ -2.14
SEC61A2Q9H9S3 SNORD116-10-201ENST00000363791 102 ntBASIC1.71□□□□□ -2.14
SEC61A2Q9H9S3 MIR17-201ENST00000385012 84 ntBASIC1.71□□□□□ -2.14
SEC61A2Q9H9S3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.71□□□□□ -2.14
SEC61A2Q9H9S3 AL356379.1-201ENST00000414105 126 ntBASIC1.71□□□□□ -2.14
SEC61A2Q9H9S3 SNORA77B-201ENST00000578179 125 ntBASIC1.71□□□□□ -2.14
SEC61A2Q9H9S3 MIR4668-201ENST00000582284 70 ntBASIC1.71□□□□□ -2.14
SEC61A2Q9H9S3 AP000942.3-201ENST00000603702 160 ntBASIC1.71□□□□□ -2.14
SEC61A2Q9H9S3 MIR8063-201ENST00000621930 81 ntBASIC1.71□□□□□ -2.14
SEC61A2Q9H9S3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.71□□□□□ -2.14
SEC61A2Q9H9S3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SEC61A2Q9H9S3 Y_RNA.191-201ENST00000363972 113 ntBASIC1.7□□□□□ -2.14
SEC61A2Q9H9S3 Y_RNA.219-201ENST00000364232 113 ntBASIC1.7□□□□□ -2.14
SEC61A2Q9H9S3 RNU6-1124P-201ENST00000384169 107 ntBASIC1.7□□□□□ -2.14
SEC61A2Q9H9S3 MIR588-201ENST00000384900 83 ntBASIC1.7□□□□□ -2.14
SEC61A2Q9H9S3 RNU6-205P-201ENST00000390858 107 ntBASIC1.7□□□□□ -2.14
SEC61A2Q9H9S3 MIR1302-7-201ENST00000408841 72 ntBASIC1.7□□□□□ -2.14
SEC61A2Q9H9S3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.7□□□□□ -2.14
SEC61A2Q9H9S3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.7□□□□□ -2.14
SEC61A2Q9H9S3 AC133485.1-201ENST00000567176 124 ntBASIC1.7□□□□□ -2.14
SEC61A2Q9H9S3 AC015688.6-201ENST00000577737 104 ntBASIC1.7□□□□□ -2.14
SEC61A2Q9H9S3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SEC61A2Q9H9S3 AC012676.2-201ENST00000619258 186 ntBASIC1.7□□□□□ -2.14
SEC61A2Q9H9S3 RNU6-1244P-201ENST00000363614 108 ntBASIC1.69□□□□□ -2.14
SEC61A2Q9H9S3 RNU6-219P-201ENST00000364728 107 ntBASIC1.69□□□□□ -2.14
SEC61A2Q9H9S3 RNU6-675P-201ENST00000384236 104 ntBASIC1.69□□□□□ -2.14
SEC61A2Q9H9S3 RNU6-242P-201ENST00000384359 107 ntBASIC1.69□□□□□ -2.14
SEC61A2Q9H9S3 RNU6-447P-201ENST00000410293 104 ntBASIC1.69□□□□□ -2.14
SEC61A2Q9H9S3 RNU6-1118P-201ENST00000410382 104 ntBASIC1.69□□□□□ -2.14
SEC61A2Q9H9S3 RNU6-1076P-201ENST00000410397 104 ntBASIC1.69□□□□□ -2.14
SEC61A2Q9H9S3 RNU6-355P-201ENST00000410427 104 ntBASIC1.69□□□□□ -2.14
SEC61A2Q9H9S3 RNU6-791P-201ENST00000410467 104 ntBASIC1.69□□□□□ -2.14
SEC61A2Q9H9S3 RNU6-705P-201ENST00000410601 104 ntBASIC1.69□□□□□ -2.14
SEC61A2Q9H9S3 Y_RNA.609-201ENST00000410669 89 ntBASIC1.69□□□□□ -2.14
SEC61A2Q9H9S3 RNU6-1100P-201ENST00000410691 104 ntBASIC1.69□□□□□ -2.14
SEC61A2Q9H9S3 RNU6-860P-201ENST00000410860 104 ntBASIC1.69□□□□□ -2.14
SEC61A2Q9H9S3 RNA5SP489-201ENST00000410986 109 ntBASIC1.69□□□□□ -2.14
SEC61A2Q9H9S3 RNU6-1217P-201ENST00000411276 104 ntBASIC1.69□□□□□ -2.14
SEC61A2Q9H9S3 RNU6-785P-201ENST00000411324 104 ntBASIC1.69□□□□□ -2.14
SEC61A2Q9H9S3 HSPE1P24-201ENST00000450782 238 ntBASIC1.69□□□□□ -2.14
SEC61A2Q9H9S3 snoU13.25-201ENST00000458945 104 ntBASIC1.69□□□□□ -2.14
SEC61A2Q9H9S3 snoU13.2-201ENST00000459201 104 ntBASIC1.69□□□□□ -2.14
SEC61A2Q9H9S3 U6.90-201ENST00000614007 104 ntBASIC1.69□□□□□ -2.14
SEC61A2Q9H9S3 U6.70-201ENST00000620287 104 ntBASIC1.69□□□□□ -2.14
SEC61A2Q9H9S3 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.69□□□□□ -2.14
SEC61A2Q9H9S3 AP001362.1-201ENST00000625165 124 ntBASIC1.69□□□□□ -2.14
SEC61A2Q9H9S3 WWP1P1-201ENST00000466609 2769 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 198.9 ms