Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 RPS3AP1-201ENST00000413190 320 ntBASIC1.49□□□□□ -2.17
VPS16Q9H269 RNU6-893P-201ENST00000458841 100 ntBASIC1.49□□□□□ -2.17
VPS16Q9H269 RN7SKP88-201ENST00000516847 250 ntBASIC1.49□□□□□ -2.17
VPS16Q9H269 MIR4769-201ENST00000584126 77 ntBASIC1.49□□□□□ -2.17
VPS16Q9H269 7SK.8-201ENST00000612110 250 ntBASIC1.49□□□□□ -2.17
VPS16Q9H269 7SK.11-201ENST00000615477 250 ntBASIC1.49□□□□□ -2.17
VPS16Q9H269 7SK.13-201ENST00000622040 250 ntBASIC1.49□□□□□ -2.17
VPS16Q9H269 Z97988.1-201ENST00000637697 135 ntBASIC1.49□□□□□ -2.17
VPS16Q9H269 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.48□□□□□ -2.17
VPS16Q9H269 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.48□□□□□ -2.17
VPS16Q9H269 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
VPS16Q9H269 RNU6-363P-201ENST00000362895 105 ntBASIC1.48□□□□□ -2.17
VPS16Q9H269 RNA5SP99-201ENST00000364020 114 ntBASIC1.48□□□□□ -2.17
VPS16Q9H269 RNU6-1113P-201ENST00000384348 107 ntBASIC1.48□□□□□ -2.17
VPS16Q9H269 RNU6-342P-201ENST00000384521 104 ntBASIC1.48□□□□□ -2.17
VPS16Q9H269 MIR605-201ENST00000385078 83 ntBASIC1.48□□□□□ -2.17
VPS16Q9H269 SNORA17.3-201ENST00000391159 129 ntBASIC1.48□□□□□ -2.17
VPS16Q9H269 RNA5SP261-201ENST00000410536 106 ntBASIC1.48□□□□□ -2.17
VPS16Q9H269 RNU6-602P-201ENST00000411155 105 ntBASIC1.48□□□□□ -2.17
VPS16Q9H269 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.48□□□□□ -2.17
VPS16Q9H269 RPS29P23-201ENST00000458635 123 ntBASIC1.48□□□□□ -2.17
VPS16Q9H269 AC068338.1-201ENST00000565567 176 ntBASIC1.48□□□□□ -2.17
VPS16Q9H269 RNU6-1099P-201ENST00000363533 107 ntBASIC1.47□□□□□ -2.17
VPS16Q9H269 RNU4-67P-201ENST00000364569 141 ntBASIC1.47□□□□□ -2.17
VPS16Q9H269 Y_RNA.360-201ENST00000365512 102 ntBASIC1.47□□□□□ -2.17
VPS16Q9H269 Y_RNA.369-201ENST00000365568 117 ntBASIC1.47□□□□□ -2.17
VPS16Q9H269 MIR488-201ENST00000365739 83 ntBASIC1.47□□□□□ -2.17
VPS16Q9H269 Y_RNA.544-201ENST00000384650 113 ntBASIC1.47□□□□□ -2.17
VPS16Q9H269 RNU6-1067P-201ENST00000384752 107 ntBASIC1.47□□□□□ -2.17
VPS16Q9H269 MIR758-201ENST00000390227 88 ntBASIC1.47□□□□□ -2.17
VPS16Q9H269 RNU6-679P-201ENST00000391003 106 ntBASIC1.47□□□□□ -2.17
VPS16Q9H269 RNU6-237P-201ENST00000515985 71 ntBASIC1.47□□□□□ -2.17
VPS16Q9H269 RNU6-947P-201ENST00000516264 106 ntBASIC1.47□□□□□ -2.17
VPS16Q9H269 CYP3A52P-201ENST00000563326 91 ntBASIC1.47□□□□□ -2.17
VPS16Q9H269 MIR3124-201ENST00000582636 67 ntBASIC1.47□□□□□ -2.17
VPS16Q9H269 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
VPS16Q9H269 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.46□□□□□ -2.18
VPS16Q9H269 RNU6-49P-201ENST00000384256 107 ntBASIC1.46□□□□□ -2.18
VPS16Q9H269 Y_RNA.507-201ENST00000384500 99 ntBASIC1.46□□□□□ -2.18
VPS16Q9H269 MIR577-201ENST00000385196 96 ntBASIC1.46□□□□□ -2.18
VPS16Q9H269 SNORD111.1-201ENST00000516421 86 ntBASIC1.46□□□□□ -2.18
VPS16Q9H269 MIR3192-201ENST00000584920 77 ntBASIC1.46□□□□□ -2.18
VPS16Q9H269 Y_RNA.818-201ENST00000618813 71 ntBASIC1.46□□□□□ -2.18
VPS16Q9H269 MIR4251-201ENST00000635819 61 ntBASIC1.46□□□□□ -2.18
VPS16Q9H269 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.45□□□□□ -2.18
VPS16Q9H269 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
VPS16Q9H269 Y_RNA.155-201ENST00000363632 101 ntBASIC1.45□□□□□ -2.18
VPS16Q9H269 RNU6-1131P-201ENST00000364955 107 ntBASIC1.45□□□□□ -2.18
VPS16Q9H269 RNU6-409P-201ENST00000384114 104 ntBASIC1.45□□□□□ -2.18
VPS16Q9H269 SNORD26-201ENST00000384147 75 ntBASIC1.45□□□□□ -2.18
VPS16Q9H269 SNORA7.5-201ENST00000410672 110 ntBASIC1.45□□□□□ -2.18
VPS16Q9H269 RNU6-733P-201ENST00000410759 104 ntBASIC1.45□□□□□ -2.18
VPS16Q9H269 AC009474.2-201ENST00000451383 136 ntBASIC1.45□□□□□ -2.18
VPS16Q9H269 snoU13.25-201ENST00000458945 104 ntBASIC1.45□□□□□ -2.18
VPS16Q9H269 SNORA40.13-201ENST00000516379 120 ntBASIC1.45□□□□□ -2.18
VPS16Q9H269 RNU6-165P-201ENST00000517170 99 ntBASIC1.45□□□□□ -2.18
VPS16Q9H269 MIR4694-201ENST00000578534 80 ntBASIC1.45□□□□□ -2.18
VPS16Q9H269 AC006254.2-201ENST00000603259 279 ntBASIC1.45□□□□□ -2.18
VPS16Q9H269 AL096861.1-201ENST00000610899 123 ntBASIC1.45□□□□□ -2.18
VPS16Q9H269 RNY3P2-201ENST00000362918 102 ntBASIC1.44□□□□□ -2.18
VPS16Q9H269 Y_RNA.466-201ENST00000384294 113 ntBASIC1.44□□□□□ -2.18
VPS16Q9H269 SNORA18-201ENST00000384416 132 ntBASIC1.44□□□□□ -2.18
VPS16Q9H269 RNU6-1307P-201ENST00000391012 103 ntBASIC1.44□□□□□ -2.18
VPS16Q9H269 SNORD77B-201ENST00000391112 67 ntBASIC1.44□□□□□ -2.18
VPS16Q9H269 MIR1302-7-201ENST00000408841 72 ntBASIC1.44□□□□□ -2.18
VPS16Q9H269 MTATP8P2-201ENST00000435212 202 ntBASIC1.44□□□□□ -2.18
VPS16Q9H269 AC245047.7-201ENST00000440265 293 ntBASIC1.44□□□□□ -2.18
VPS16Q9H269 RNU6-521P-201ENST00000516663 105 ntBASIC1.44□□□□□ -2.18
VPS16Q9H269 RNU6-158P-201ENST00000517104 100 ntBASIC1.44□□□□□ -2.18
VPS16Q9H269 RNU7-35P-201ENST00000517174 62 ntBASIC1.44□□□□□ -2.18
VPS16Q9H269 DEFB131E-201ENST00000532329 154 ntBASIC1.44□□□□□ -2.18
VPS16Q9H269 RNU6-832P-201ENST00000363319 107 ntBASIC1.43□□□□□ -2.18
VPS16Q9H269 RNU1-123P-201ENST00000458950 160 ntBASIC1.43□□□□□ -2.18
VPS16Q9H269 AP000942.3-201ENST00000603702 160 ntBASIC1.43□□□□□ -2.18
VPS16Q9H269 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
VPS16Q9H269 ZNF209P-201ENST00000593450 2304 ntBASIC1.42□□□□□ -2.18
VPS16Q9H269 RNY1P7-201ENST00000384743 110 ntBASIC1.42□□□□□ -2.18
VPS16Q9H269 MIR150-201ENST00000385048 84 ntBASIC1.42□□□□□ -2.18
VPS16Q9H269 RNU6-1054P-201ENST00000411293 104 ntBASIC1.42□□□□□ -2.18
VPS16Q9H269 AC244023.1-201ENST00000426884 112 ntBASIC1.42□□□□□ -2.18
VPS16Q9H269 AL133373.1-201ENST00000497098 94 ntBASIC1.42□□□□□ -2.18
VPS16Q9H269 SCARNA23-201ENST00000516060 130 ntBASIC1.42□□□□□ -2.18
VPS16Q9H269 MIR548Z-201ENST00000584743 97 ntBASIC1.42□□□□□ -2.18
VPS16Q9H269 AC242498.1-201ENST00000604134 111 ntBASIC1.42□□□□□ -2.18
VPS16Q9H269 FAM71BP1-201ENST00000604431 523 ntBASIC1.42□□□□□ -2.18
VPS16Q9H269 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.42□□□□□ -2.18
VPS16Q9H269 AC091304.10-201ENST00000641554 121 ntBASIC1.42□□□□□ -2.18
VPS16Q9H269 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
VPS16Q9H269 Y_RNA.93-201ENST00000363066 109 ntBASIC1.41□□□□□ -2.18
VPS16Q9H269 Y_RNA.140-201ENST00000363474 103 ntBASIC1.41□□□□□ -2.18
VPS16Q9H269 RNU4-36P-201ENST00000364294 144 ntBASIC1.41□□□□□ -2.18
VPS16Q9H269 RNU6-1201P-201ENST00000384227 107 ntBASIC1.41□□□□□ -2.18
VPS16Q9H269 MIR206-201ENST00000384872 86 ntBASIC1.41□□□□□ -2.18
VPS16Q9H269 RNU4-62P-201ENST00000410125 130 ntBASIC1.41□□□□□ -2.18
VPS16Q9H269 Y_RNA.601-201ENST00000410500 113 ntBASIC1.41□□□□□ -2.18
VPS16Q9H269 RNA5SP458-201ENST00000516188 119 ntBASIC1.41□□□□□ -2.18
VPS16Q9H269 RNU6-795P-201ENST00000516323 103 ntBASIC1.41□□□□□ -2.18
VPS16Q9H269 PRELID3BP2-201ENST00000605362 201 ntBASIC1.41□□□□□ -2.18
VPS16Q9H269 AC012531.4-201ENST00000616509 177 ntBASIC1.41□□□□□ -2.18
VPS16Q9H269 RNU6-1313P-201ENST00000362622 102 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms