Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 SNORD38B-202ENST00000625943 69 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 MIR3199-2-201ENST00000636243 86 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 MIR338-201ENST00000636369 67 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 MIR622-201ENST00000638396 96 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 MIR4426-201ENST00000640330 63 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 AP000648.3-201ENST00000623539 4507 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 MIR429-201ENST00000362106 83 ntBASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 RNU6-598P-201ENST00000364017 105 ntBASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 SNORA15B-2-201ENST00000384058 135 ntBASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 RNU6-458P-201ENST00000384179 107 ntBASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 SNORA15B-1-201ENST00000384334 135 ntBASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 MIR599-201ENST00000385069 95 ntBASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 MIR563-201ENST00000385080 79 ntBASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 SNORD115.2-201ENST00000391126 59 ntBASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 RNU6-995P-201ENST00000391244 107 ntBASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 AC245047.3-201ENST00000429428 127 ntBASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 RN7SL429P-201ENST00000479090 223 ntBASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 RN7SL297P-201ENST00000483161 293 ntBASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 RN7SL489P-201ENST00000486185 223 ntBASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 RN7SL327P-201ENST00000488659 223 ntBASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 RNU6-916P-201ENST00000516088 109 ntBASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 RNA5SP227-201ENST00000516184 113 ntBASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 AC245166.1-201ENST00000521012 253 ntBASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 AC024995.1-201ENST00000523014 93 ntBASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 U6.58-201ENST00000613107 107 ntBASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 MIR6715A-201ENST00000615929 79 ntBASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 RN7SL853P-201ENST00000617250 223 ntBASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 AC006065.5-201ENST00000623427 349 ntBASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 AC090517.3-201ENST00000625170 141 ntBASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 MIR548AH-201ENST00000637109 76 ntBASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
KRTAP4-3Q9BYR4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 AC009487.2-201ENST00000420969 6821 ntBASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 MIR101-2-201ENST00000362195 79 ntBASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 MIR30D-201ENST00000362283 70 ntBASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 RNU4-85P-201ENST00000364675 123 ntBASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 SNORA9.2-201ENST00000365361 133 ntBASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 SNORD115-44-201ENST00000365391 82 ntBASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 SNORA46-201ENST00000384762 135 ntBASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 MIR147B-201ENST00000390185 80 ntBASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 U8.16-201ENST00000391279 133 ntBASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 AL138827.1-201ENST00000402666 306 ntBASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 RNU6-1165P-201ENST00000410119 107 ntBASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 SRIP3-201ENST00000413200 219 ntBASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 RPS29P6-201ENST00000438196 145 ntBASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 AL606517.2-201ENST00000442855 241 ntBASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 AL441985.1-201ENST00000457727 251 ntBASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 Y_RNA.633-201ENST00000459107 95 ntBASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 AC003982.1-202ENST00000469928 248 ntBASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 RN7SL633P-201ENST00000488974 297 ntBASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 RNU6-518P-201ENST00000516056 96 ntBASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 RNU6-1282P-201ENST00000516735 96 ntBASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 SNORD19.2-201ENST00000516978 73 ntBASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 AC079598.5-201ENST00000547460 117 ntBASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 RNU6-84P-201ENST00000607737 102 ntBASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 U7.8-201ENST00000619968 63 ntBASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 MTRNR2L9-201ENST00000622562 75 ntBASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
KRTAP4-3Q9BYR4 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 RNA5SP289-201ENST00000362332 137 ntBASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 SNORA25.3-201ENST00000363205 127 ntBASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 RNU6V-201ENST00000384105 107 ntBASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 RNU6-301P-201ENST00000384277 107 ntBASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 RNU6-110P-201ENST00000384508 104 ntBASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 MIR196B-201ENST00000384852 84 ntBASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 MIR515-2-201ENST00000384883 83 ntBASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 MIR515-1-201ENST00000384884 83 ntBASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 MIR588-201ENST00000384900 83 ntBASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 MIR548AA1-201ENST00000384971 97 ntBASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 SNORD89-201ENST00000390981 114 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms