Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AC108081.1-201ENST00000604358 221 ntBASIC1.09□□□□□ -2.23
PAAF1Q9BRP4 MIR1-1-201ENST00000362147 71 ntBASIC1.08□□□□□ -2.24
PAAF1Q9BRP4 RNU4-38P-201ENST00000364472 129 ntBASIC1.08□□□□□ -2.24
PAAF1Q9BRP4 SNORD114-24-201ENST00000365029 72 ntBASIC1.08□□□□□ -2.24
PAAF1Q9BRP4 MIR613-201ENST00000385248 95 ntBASIC1.08□□□□□ -2.24
PAAF1Q9BRP4 MIR100-201ENST00000385259 80 ntBASIC1.08□□□□□ -2.24
PAAF1Q9BRP4 MIR1285-1-201ENST00000408593 84 ntBASIC1.08□□□□□ -2.24
PAAF1Q9BRP4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.08□□□□□ -2.24
PAAF1Q9BRP4 RNU2-35P-201ENST00000516446 142 ntBASIC1.08□□□□□ -2.24
PAAF1Q9BRP4 AC004812.1-201ENST00000540773 146 ntBASIC1.08□□□□□ -2.24
PAAF1Q9BRP4 MIR3973-201ENST00000579824 107 ntBASIC1.08□□□□□ -2.24
PAAF1Q9BRP4 Y_RNA.298-201ENST00000364960 107 ntBASIC1.07□□□□□ -2.24
PAAF1Q9BRP4 MIR539-201ENST00000365690 78 ntBASIC1.07□□□□□ -2.24
PAAF1Q9BRP4 RNU6-187P-201ENST00000384139 106 ntBASIC1.07□□□□□ -2.24
PAAF1Q9BRP4 Y_RNA.531-201ENST00000384589 121 ntBASIC1.07□□□□□ -2.24
PAAF1Q9BRP4 AL512326.2-201ENST00000426359 151 ntBASIC1.07□□□□□ -2.24
PAAF1Q9BRP4 RNU7-123P-201ENST00000515911 60 ntBASIC1.07□□□□□ -2.24
PAAF1Q9BRP4 RNU6-1258P-201ENST00000516911 111 ntBASIC1.07□□□□□ -2.24
PAAF1Q9BRP4 MIR4771-2-201ENST00000577758 74 ntBASIC1.07□□□□□ -2.24
PAAF1Q9BRP4 MIR4771-1-201ENST00000582617 74 ntBASIC1.07□□□□□ -2.24
PAAF1Q9BRP4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
PAAF1Q9BRP4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.06□□□□□ -2.24
PAAF1Q9BRP4 SNORD89-201ENST00000390981 114 ntBASIC1.06□□□□□ -2.24
PAAF1Q9BRP4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.06□□□□□ -2.24
PAAF1Q9BRP4 MIR18B-201ENST00000454574 71 ntBASIC1.06□□□□□ -2.24
PAAF1Q9BRP4 snoU13.21-201ENST00000459368 105 ntBASIC1.06□□□□□ -2.24
PAAF1Q9BRP4 RN7SKP179-201ENST00000516126 217 ntBASIC1.06□□□□□ -2.24
PAAF1Q9BRP4 RNY4P20-201ENST00000516678 93 ntBASIC1.06□□□□□ -2.24
PAAF1Q9BRP4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.06□□□□□ -2.24
PAAF1Q9BRP4 AL078603.1-201ENST00000603824 313 ntBASIC1.06□□□□□ -2.24
PAAF1Q9BRP4 AL136317.1-201ENST00000612653 226 ntBASIC1.06□□□□□ -2.24
PAAF1Q9BRP4 AL662814.1-201ENST00000617364 121 ntBASIC1.06□□□□□ -2.24
PAAF1Q9BRP4 RNU6-235P-201ENST00000362644 107 ntBASIC1.05□□□□□ -2.24
PAAF1Q9BRP4 SNORA32-201ENST00000384072 121 ntBASIC1.05□□□□□ -2.24
PAAF1Q9BRP4 Y_RNA.470-201ENST00000384307 117 ntBASIC1.05□□□□□ -2.24
PAAF1Q9BRP4 RNU6-342P-201ENST00000384521 104 ntBASIC1.05□□□□□ -2.24
PAAF1Q9BRP4 MT-TF-201ENST00000387314 71 ntBASIC1.05□□□□□ -2.24
PAAF1Q9BRP4 MIR1263-201ENST00000408324 86 ntBASIC1.05□□□□□ -2.24
PAAF1Q9BRP4 RN7SKP19-201ENST00000516016 252 ntBASIC1.05□□□□□ -2.24
PAAF1Q9BRP4 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.05□□□□□ -2.24
PAAF1Q9BRP4 AC023934.1-201ENST00000574529 2389 ntBASIC1.05□□□□□ -2.24
PAAF1Q9BRP4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.05□□□□□ -2.24
PAAF1Q9BRP4 MIR759-201ENST00000390224 91 ntBASIC1.04□□□□□ -2.24
PAAF1Q9BRP4 MIR548J-201ENST00000408833 112 ntBASIC1.04□□□□□ -2.24
PAAF1Q9BRP4 RNU6-1086P-201ENST00000410930 100 ntBASIC1.04□□□□□ -2.24
PAAF1Q9BRP4 RPS26P5-201ENST00000418544 335 ntBASIC1.04□□□□□ -2.24
PAAF1Q9BRP4 AL158147.1-201ENST00000443970 75 ntBASIC1.04□□□□□ -2.24
PAAF1Q9BRP4 snoU13.18-201ENST00000459483 104 ntBASIC1.04□□□□□ -2.24
PAAF1Q9BRP4 PDCD5P2-201ENST00000507570 312 ntBASIC1.04□□□□□ -2.24
PAAF1Q9BRP4 RNU6-977P-201ENST00000516411 103 ntBASIC1.04□□□□□ -2.24
PAAF1Q9BRP4 RNU6-1061P-201ENST00000516530 99 ntBASIC1.04□□□□□ -2.24
PAAF1Q9BRP4 uc_338.6-201ENST00000613544 171 ntBASIC1.04□□□□□ -2.24
PAAF1Q9BRP4 RNU6-704P-201ENST00000364162 103 ntBASIC1.03□□□□□ -2.24
PAAF1Q9BRP4 Y_RNA.299-201ENST00000364973 94 ntBASIC1.03□□□□□ -2.24
PAAF1Q9BRP4 SNORD50.2-201ENST00000365465 70 ntBASIC1.03□□□□□ -2.24
PAAF1Q9BRP4 Y_RNA.586-201ENST00000391146 98 ntBASIC1.03□□□□□ -2.24
PAAF1Q9BRP4 MIR1257-201ENST00000408490 117 ntBASIC1.03□□□□□ -2.24
PAAF1Q9BRP4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.03□□□□□ -2.24
PAAF1Q9BRP4 AC015818.7-201ENST00000428754 109 ntBASIC1.03□□□□□ -2.24
PAAF1Q9BRP4 AC087499.7-201ENST00000441958 109 ntBASIC1.03□□□□□ -2.24
PAAF1Q9BRP4 OR2A41P-201ENST00000473586 105 ntBASIC1.03□□□□□ -2.24
PAAF1Q9BRP4 AC141846.1-201ENST00000568348 142 ntBASIC1.03□□□□□ -2.24
PAAF1Q9BRP4 MIR6788-201ENST00000618842 66 ntBASIC1.03□□□□□ -2.24
PAAF1Q9BRP4 SNORD115-2-201ENST00000362842 82 ntBASIC1.02□□□□□ -2.25
PAAF1Q9BRP4 SNORD115-20-201ENST00000365099 82 ntBASIC1.02□□□□□ -2.25
PAAF1Q9BRP4 MIR563-201ENST00000385080 79 ntBASIC1.02□□□□□ -2.25
PAAF1Q9BRP4 SUMO1P3-201ENST00000439961 304 ntBASIC1.02□□□□□ -2.25
PAAF1Q9BRP4 U7.7-201ENST00000459276 60 ntBASIC1.02□□□□□ -2.25
PAAF1Q9BRP4 RNA5SP220-201ENST00000516298 104 ntBASIC1.02□□□□□ -2.25
PAAF1Q9BRP4 RNU6-971P-201ENST00000516920 106 ntBASIC1.02□□□□□ -2.25
PAAF1Q9BRP4 MIR4698-201ENST00000577795 80 ntBASIC1.02□□□□□ -2.25
PAAF1Q9BRP4 MIR548AE2-201ENST00000583456 67 ntBASIC1.02□□□□□ -2.25
PAAF1Q9BRP4 AC022709.1-201ENST00000615967 87 ntBASIC1.02□□□□□ -2.25
PAAF1Q9BRP4 MIR6734-201ENST00000621166 68 ntBASIC1.02□□□□□ -2.25
PAAF1Q9BRP4 MIR30D-201ENST00000362283 70 ntBASIC1.01□□□□□ -2.25
PAAF1Q9BRP4 RNU6-42P-201ENST00000384165 107 ntBASIC1.01□□□□□ -2.25
PAAF1Q9BRP4 SNORD93-201ENST00000408813 74 ntBASIC1.01□□□□□ -2.25
PAAF1Q9BRP4 RNU4-69P-201ENST00000410677 143 ntBASIC1.01□□□□□ -2.25
PAAF1Q9BRP4 RNU7-79P-201ENST00000516082 62 ntBASIC1.01□□□□□ -2.25
PAAF1Q9BRP4 RNU6-1110P-201ENST00000516462 101 ntBASIC1.01□□□□□ -2.25
PAAF1Q9BRP4 MIR4661-201ENST00000582720 75 ntBASIC1.01□□□□□ -2.25
PAAF1Q9BRP4 MIR532-201ENST00000385025 91 ntBASIC1□□□□□ -2.25
PAAF1Q9BRP4 AL603908.1-201ENST00000406098 201 ntBASIC1□□□□□ -2.25
PAAF1Q9BRP4 MIR1827-201ENST00000408549 66 ntBASIC1□□□□□ -2.25
PAAF1Q9BRP4 RNA5SP136-201ENST00000410906 107 ntBASIC1□□□□□ -2.25
PAAF1Q9BRP4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1□□□□□ -2.25
PAAF1Q9BRP4 RNU7-185P-201ENST00000459215 60 ntBASIC1□□□□□ -2.25
PAAF1Q9BRP4 IGKV1-22-201ENST00000524313 326 ntBASIC1□□□□□ -2.25
PAAF1Q9BRP4 AC025627.3-201ENST00000582078 182 ntBASIC1□□□□□ -2.25
PAAF1Q9BRP4 AL589743.1-201ENST00000551932 2712 ntBASIC0.99□□□□□ -2.25
PAAF1Q9BRP4 Y_RNA.213-201ENST00000364178 111 ntBASIC0.99□□□□□ -2.25
PAAF1Q9BRP4 RNU6-364P-201ENST00000384387 107 ntBASIC0.99□□□□□ -2.25
PAAF1Q9BRP4 MIR520F-201ENST00000384824 87 ntBASIC0.99□□□□□ -2.25
PAAF1Q9BRP4 SNORD77B-201ENST00000391112 67 ntBASIC0.99□□□□□ -2.25
PAAF1Q9BRP4 UBL5P1-201ENST00000507979 193 ntBASIC0.99□□□□□ -2.25
PAAF1Q9BRP4 RNU7-35P-201ENST00000517174 62 ntBASIC0.99□□□□□ -2.25
PAAF1Q9BRP4 AC022523.2-201ENST00000561045 150 ntBASIC0.99□□□□□ -2.25
PAAF1Q9BRP4 MIR4676-201ENST00000583078 72 ntBASIC0.99□□□□□ -2.25
PAAF1Q9BRP4 MIR151B-201ENST00000584249 96 ntBASIC0.99□□□□□ -2.25
PAAF1Q9BRP4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 212.8 ms