Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 RNU6-1149P-201ENST00000516810 97 ntBASIC0.14□□□□□ -2.39
KLHDC3Q9BQ90 MIR4514-201ENST00000581410 57 ntBASIC0.14□□□□□ -2.39
KLHDC3Q9BQ90 MIR4768-201ENST00000585270 74 ntBASIC0.14□□□□□ -2.39
KLHDC3Q9BQ90 AC023932.2-201ENST00000603176 175 ntBASIC0.14□□□□□ -2.39
KLHDC3Q9BQ90 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.14□□□□□ -2.39
KLHDC3Q9BQ90 MIR371B-201ENST00000638082 66 ntBASIC0.14□□□□□ -2.39
KLHDC3Q9BQ90 MIR330-201ENST00000362196 94 ntBASIC0.13□□□□□ -2.39
KLHDC3Q9BQ90 Y_RNA.32-201ENST00000362589 110 ntBASIC0.13□□□□□ -2.39
KLHDC3Q9BQ90 Y_RNA.149-201ENST00000363558 117 ntBASIC0.13□□□□□ -2.39
KLHDC3Q9BQ90 Y_RNA.288-201ENST00000364854 92 ntBASIC0.13□□□□□ -2.39
KLHDC3Q9BQ90 Y_RNA.308-201ENST00000365043 101 ntBASIC0.13□□□□□ -2.39
KLHDC3Q9BQ90 RNU6-643P-201ENST00000384018 107 ntBASIC0.13□□□□□ -2.39
KLHDC3Q9BQ90 SNORA72.6-201ENST00000384520 129 ntBASIC0.13□□□□□ -2.39
KLHDC3Q9BQ90 RNU2-59P-201ENST00000410482 191 ntBASIC0.13□□□□□ -2.39
KLHDC3Q9BQ90 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.13□□□□□ -2.39
KLHDC3Q9BQ90 AC073261.1-201ENST00000429409 121 ntBASIC0.13□□□□□ -2.39
KLHDC3Q9BQ90 Y_RNA.47-201ENST00000362697 108 ntBASIC0.12□□□□□ -2.39
KLHDC3Q9BQ90 RNU4-16P-201ENST00000364737 141 ntBASIC0.12□□□□□ -2.39
KLHDC3Q9BQ90 RNY1P13-201ENST00000365030 105 ntBASIC0.12□□□□□ -2.39
KLHDC3Q9BQ90 RNY4P28-201ENST00000365281 93 ntBASIC0.12□□□□□ -2.39
KLHDC3Q9BQ90 Y_RNA.536-201ENST00000384621 113 ntBASIC0.12□□□□□ -2.39
KLHDC3Q9BQ90 Y_RNA.562-201ENST00000384695 113 ntBASIC0.12□□□□□ -2.39
KLHDC3Q9BQ90 SNORD127-201ENST00000458892 86 ntBASIC0.12□□□□□ -2.39
KLHDC3Q9BQ90 SNORA31.14-201ENST00000516728 116 ntBASIC0.12□□□□□ -2.39
KLHDC3Q9BQ90 RNA5SP268-201ENST00000516828 124 ntBASIC0.12□□□□□ -2.39
KLHDC3Q9BQ90 AC069113.3-201ENST00000521019 150 ntBASIC0.12□□□□□ -2.39
KLHDC3Q9BQ90 AC112693.2-201ENST00000556538 232 ntBASIC0.12□□□□□ -2.39
KLHDC3Q9BQ90 AC008737.2-201ENST00000599446 118 ntBASIC0.12□□□□□ -2.39
KLHDC3Q9BQ90 RNU2-4P-201ENST00000606190 192 ntBASIC0.12□□□□□ -2.39
KLHDC3Q9BQ90 Y_RNA.812-201ENST00000610788 101 ntBASIC0.12□□□□□ -2.39
KLHDC3Q9BQ90 MIR8087-201ENST00000612745 78 ntBASIC0.12□□□□□ -2.39
KLHDC3Q9BQ90 Y_RNA.784-201ENST00000613803 101 ntBASIC0.12□□□□□ -2.39
KLHDC3Q9BQ90 Y_RNA.787-201ENST00000616522 101 ntBASIC0.12□□□□□ -2.39
KLHDC3Q9BQ90 Y_RNA.780-201ENST00000617336 101 ntBASIC0.12□□□□□ -2.39
KLHDC3Q9BQ90 Y_RNA.801-201ENST00000619005 101 ntBASIC0.12□□□□□ -2.39
KLHDC3Q9BQ90 MIR4315-1-201ENST00000636800 73 ntBASIC0.12□□□□□ -2.39
KLHDC3Q9BQ90 MIR4315-2-201ENST00000640925 73 ntBASIC0.12□□□□□ -2.39
KLHDC3Q9BQ90 RNA5SP457-201ENST00000363657 124 ntBASIC0.11□□□□□ -2.39
KLHDC3Q9BQ90 RNU6-1229P-201ENST00000364295 107 ntBASIC0.11□□□□□ -2.39
KLHDC3Q9BQ90 SNORA25.7-201ENST00000364375 127 ntBASIC0.11□□□□□ -2.39
KLHDC3Q9BQ90 RNY1P6-201ENST00000384193 109 ntBASIC0.11□□□□□ -2.39
KLHDC3Q9BQ90 Y_RNA.539-201ENST00000384635 107 ntBASIC0.11□□□□□ -2.39
KLHDC3Q9BQ90 RNU6-493P-201ENST00000391321 108 ntBASIC0.11□□□□□ -2.39
KLHDC3Q9BQ90 RNY3P16-201ENST00000516338 101 ntBASIC0.11□□□□□ -2.39
KLHDC3Q9BQ90 Y_RNA.697-201ENST00000516776 113 ntBASIC0.11□□□□□ -2.39
KLHDC3Q9BQ90 SCARNA16.5-201ENST00000517114 183 ntBASIC0.11□□□□□ -2.39
KLHDC3Q9BQ90 Y_RNA.757-201ENST00000578934 114 ntBASIC0.11□□□□□ -2.39
KLHDC3Q9BQ90 MIR6828-201ENST00000636181 60 ntBASIC0.11□□□□□ -2.39
KLHDC3Q9BQ90 RNU6-275P-201ENST00000364910 107 ntBASIC0.1□□□□□ -2.39
KLHDC3Q9BQ90 RNU6-291P-201ENST00000384720 107 ntBASIC0.1□□□□□ -2.39
KLHDC3Q9BQ90 RNA5SP63-201ENST00000391225 112 ntBASIC0.1□□□□□ -2.39
KLHDC3Q9BQ90 RNU6-1194P-201ENST00000516208 104 ntBASIC0.1□□□□□ -2.39
KLHDC3Q9BQ90 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
KLHDC3Q9BQ90 MIR4639-201ENST00000584938 69 ntBASIC0.1□□□□□ -2.39
KLHDC3Q9BQ90 MTND5P32-201ENST00000560711 1802 ntBASIC0.09□□□□□ -2.39
KLHDC3Q9BQ90 RNU6-815P-201ENST00000384080 113 ntBASIC0.09□□□□□ -2.4
KLHDC3Q9BQ90 RNU6-738P-201ENST00000384531 106 ntBASIC0.09□□□□□ -2.4
KLHDC3Q9BQ90 Y_RNA.556-201ENST00000384677 113 ntBASIC0.09□□□□□ -2.4
KLHDC3Q9BQ90 RNU6-535P-201ENST00000384722 107 ntBASIC0.09□□□□□ -2.4
KLHDC3Q9BQ90 Y_RNA.571-201ENST00000384753 98 ntBASIC0.09□□□□□ -2.4
KLHDC3Q9BQ90 RNA5SP47-201ENST00000517230 109 ntBASIC0.09□□□□□ -2.4
KLHDC3Q9BQ90 MIR7107-201ENST00000611489 80 ntBASIC0.09□□□□□ -2.4
KLHDC3Q9BQ90 Y_RNA.182-201ENST00000363880 111 ntBASIC0.08□□□□□ -2.4
KLHDC3Q9BQ90 RNU4-67P-201ENST00000364569 141 ntBASIC0.08□□□□□ -2.4
KLHDC3Q9BQ90 RNU4-70P-201ENST00000384579 139 ntBASIC0.08□□□□□ -2.4
KLHDC3Q9BQ90 SNORD58.1-201ENST00000391313 66 ntBASIC0.08□□□□□ -2.4
KLHDC3Q9BQ90 RNA5SP144-201ENST00000410846 116 ntBASIC0.08□□□□□ -2.4
KLHDC3Q9BQ90 AL358176.2-201ENST00000425769 204 ntBASIC0.08□□□□□ -2.4
KLHDC3Q9BQ90 RNU7-79P-201ENST00000516082 62 ntBASIC0.08□□□□□ -2.4
KLHDC3Q9BQ90 RNA5SP227-201ENST00000516184 113 ntBASIC0.08□□□□□ -2.4
KLHDC3Q9BQ90 SNORA25.16-201ENST00000516741 121 ntBASIC0.08□□□□□ -2.4
KLHDC3Q9BQ90 RNU6-1258P-201ENST00000516911 111 ntBASIC0.08□□□□□ -2.4
KLHDC3Q9BQ90 RNU7-35P-201ENST00000517174 62 ntBASIC0.08□□□□□ -2.4
KLHDC3Q9BQ90 MTND5P34-201ENST00000568888 325 ntBASIC0.08□□□□□ -2.4
KLHDC3Q9BQ90 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.08□□□□□ -2.4
KLHDC3Q9BQ90 AC091304.10-201ENST00000641554 121 ntBASIC0.08□□□□□ -2.4
KLHDC3Q9BQ90 SNORA42.1-201ENST00000363515 137 ntBASIC0.07□□□□□ -2.4
KLHDC3Q9BQ90 SNORD27-201ENST00000363981 72 ntBASIC0.07□□□□□ -2.4
KLHDC3Q9BQ90 RNU6-716P-201ENST00000365621 103 ntBASIC0.07□□□□□ -2.4
KLHDC3Q9BQ90 Y_RNA.459-201ENST00000384251 102 ntBASIC0.07□□□□□ -2.4
KLHDC3Q9BQ90 SNORD28-201ENST00000384706 75 ntBASIC0.07□□□□□ -2.4
KLHDC3Q9BQ90 Y_RNA.626-201ENST00000411288 95 ntBASIC0.07□□□□□ -2.4
KLHDC3Q9BQ90 AL022718.1-201ENST00000412004 84 ntBASIC0.07□□□□□ -2.4
KLHDC3Q9BQ90 MTND2P23-201ENST00000422990 651 ntBASIC0.07□□□□□ -2.4
KLHDC3Q9BQ90 SUMO1P3-201ENST00000439961 304 ntBASIC0.07□□□□□ -2.4
KLHDC3Q9BQ90 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
KLHDC3Q9BQ90 MRPS18CP4-201ENST00000535821 231 ntBASIC0.07□□□□□ -2.4
KLHDC3Q9BQ90 MIR4308-201ENST00000580634 81 ntBASIC0.07□□□□□ -2.4
KLHDC3Q9BQ90 MIR411-201ENST00000362239 96 ntBASIC0.06□□□□□ -2.4
KLHDC3Q9BQ90 SNORA9.1-201ENST00000362412 131 ntBASIC0.06□□□□□ -2.4
KLHDC3Q9BQ90 Y_RNA.20-201ENST00000362479 113 ntBASIC0.06□□□□□ -2.4
KLHDC3Q9BQ90 Y_RNA.75-201ENST00000362927 97 ntBASIC0.06□□□□□ -2.4
KLHDC3Q9BQ90 RNU4-58P-201ENST00000363192 141 ntBASIC0.06□□□□□ -2.4
KLHDC3Q9BQ90 Y_RNA.171-201ENST00000363760 102 ntBASIC0.06□□□□□ -2.4
KLHDC3Q9BQ90 Y_RNA.205-201ENST00000364128 113 ntBASIC0.06□□□□□ -2.4
KLHDC3Q9BQ90 Y_RNA.258-201ENST00000364613 105 ntBASIC0.06□□□□□ -2.4
KLHDC3Q9BQ90 RNU6-923P-201ENST00000364753 107 ntBASIC0.06□□□□□ -2.4
KLHDC3Q9BQ90 MIR7-2-201ENST00000384970 110 ntBASIC0.06□□□□□ -2.4
KLHDC3Q9BQ90 RNU7-113P-201ENST00000459273 62 ntBASIC0.06□□□□□ -2.4
KLHDC3Q9BQ90 RNU6-848P-201ENST00000515948 107 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 210.9 ms