Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 Y_RNA.662-201ENST00000516028 97 ntBASIC0.72□□□□□ -2.29
RAD9AQ99638 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.72□□□□□ -2.29
RAD9AQ99638 MIR3646-201ENST00000578301 84 ntBASIC0.72□□□□□ -2.29
RAD9AQ99638 AC020891.4-201ENST00000605745 93 ntBASIC0.72□□□□□ -2.29
RAD9AQ99638 MIR6841-201ENST00000637129 72 ntBASIC0.72□□□□□ -2.29
RAD9AQ99638 Y_RNA.251-201ENST00000364551 99 ntBASIC0.71□□□□□ -2.3
RAD9AQ99638 RNU6-110P-201ENST00000384508 104 ntBASIC0.71□□□□□ -2.3
RAD9AQ99638 MIR520F-201ENST00000384824 87 ntBASIC0.71□□□□□ -2.3
RAD9AQ99638 RNU7-121P-201ENST00000516604 62 ntBASIC0.71□□□□□ -2.3
RAD9AQ99638 MIR4676-201ENST00000583078 72 ntBASIC0.71□□□□□ -2.3
RAD9AQ99638 AC104465.1-201ENST00000611365 139 ntBASIC0.71□□□□□ -2.3
RAD9AQ99638 AC004792.1-201ENST00000614523 137 ntBASIC0.71□□□□□ -2.3
RAD9AQ99638 AC023934.1-201ENST00000574529 2389 ntBASIC0.71□□□□□ -2.3
RAD9AQ99638 HSBP1P2-201ENST00000299671 229 ntBASIC0.7□□□□□ -2.3
RAD9AQ99638 MIR30D-201ENST00000362283 70 ntBASIC0.7□□□□□ -2.3
RAD9AQ99638 RNY1P6-201ENST00000384193 109 ntBASIC0.7□□□□□ -2.3
RAD9AQ99638 RNU6-1237P-201ENST00000384777 107 ntBASIC0.7□□□□□ -2.3
RAD9AQ99638 MT-TF-201ENST00000387314 71 ntBASIC0.7□□□□□ -2.3
RAD9AQ99638 RNU6-588P-201ENST00000410281 105 ntBASIC0.7□□□□□ -2.3
RAD9AQ99638 RNA5SP237-201ENST00000410414 113 ntBASIC0.7□□□□□ -2.3
RAD9AQ99638 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.7□□□□□ -2.3
RAD9AQ99638 MIR4804-201ENST00000581683 73 ntBASIC0.7□□□□□ -2.3
RAD9AQ99638 MIR8087-201ENST00000612745 78 ntBASIC0.7□□□□□ -2.3
RAD9AQ99638 AL109933.3-201ENST00000619095 188 ntBASIC0.7□□□□□ -2.3
RAD9AQ99638 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.69□□□□□ -2.3
RAD9AQ99638 RNU6-1318P-201ENST00000365389 103 ntBASIC0.69□□□□□ -2.3
RAD9AQ99638 SNORD37.2-201ENST00000391075 66 ntBASIC0.69□□□□□ -2.3
RAD9AQ99638 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.69□□□□□ -2.3
RAD9AQ99638 AC092628.1-201ENST00000436250 252 ntBASIC0.69□□□□□ -2.3
RAD9AQ99638 RNU7-185P-201ENST00000459215 60 ntBASIC0.69□□□□□ -2.3
RAD9AQ99638 RNA5SP236-201ENST00000516169 116 ntBASIC0.69□□□□□ -2.3
RAD9AQ99638 AC011195.1-201ENST00000578177 177 ntBASIC0.69□□□□□ -2.3
RAD9AQ99638 DNAJC19P2-201ENST00000593340 302 ntBASIC0.69□□□□□ -2.3
RAD9AQ99638 AC243829.3-201ENST00000622177 108 ntBASIC0.69□□□□□ -2.3
RAD9AQ99638 MIR3658-201ENST00000636291 56 ntBASIC0.69□□□□□ -2.3
RAD9AQ99638 MIR330-201ENST00000362196 94 ntBASIC0.68□□□□□ -2.3
RAD9AQ99638 Y_RNA.85-201ENST00000363014 111 ntBASIC0.68□□□□□ -2.3
RAD9AQ99638 Y_RNA.441-201ENST00000384123 112 ntBASIC0.68□□□□□ -2.3
RAD9AQ99638 Y_RNA.497-201ENST00000384447 98 ntBASIC0.68□□□□□ -2.3
RAD9AQ99638 MIR520H-201ENST00000385126 88 ntBASIC0.68□□□□□ -2.3
RAD9AQ99638 RNU1-119P-201ENST00000391122 165 ntBASIC0.68□□□□□ -2.3
RAD9AQ99638 MIR938-201ENST00000401216 83 ntBASIC0.68□□□□□ -2.3
RAD9AQ99638 MIR1257-201ENST00000408490 117 ntBASIC0.68□□□□□ -2.3
RAD9AQ99638 AC244098.3-201ENST00000424803 96 ntBASIC0.68□□□□□ -2.3
RAD9AQ99638 RNU6-893P-201ENST00000458841 100 ntBASIC0.68□□□□□ -2.3
RAD9AQ99638 Y_RNA.681-201ENST00000516445 113 ntBASIC0.68□□□□□ -2.3
RAD9AQ99638 AL662814.1-201ENST00000617364 121 ntBASIC0.68□□□□□ -2.3
RAD9AQ99638 RNU6-349P-201ENST00000362402 107 ntBASIC0.67□□□□□ -2.3
RAD9AQ99638 MIR125B2-201ENST00000385128 89 ntBASIC0.67□□□□□ -2.3
RAD9AQ99638 RNU6-1135P-201ENST00000411083 103 ntBASIC0.67□□□□□ -2.3
RAD9AQ99638 AC098934.3-201ENST00000430450 190 ntBASIC0.67□□□□□ -2.3
RAD9AQ99638 MTATP6P21-201ENST00000440681 189 ntBASIC0.67□□□□□ -2.3
RAD9AQ99638 RNU7-56P-201ENST00000458744 62 ntBASIC0.67□□□□□ -2.3
RAD9AQ99638 Y_RNA.757-201ENST00000578934 114 ntBASIC0.67□□□□□ -2.3
RAD9AQ99638 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.67□□□□□ -2.3
RAD9AQ99638 Y_RNA.272-201ENST00000364696 102 ntBASIC0.66□□□□□ -2.3
RAD9AQ99638 RPL39P25-201ENST00000449384 154 ntBASIC0.66□□□□□ -2.3
RAD9AQ99638 AC074198.2-201ENST00000508153 258 ntBASIC0.66□□□□□ -2.3
RAD9AQ99638 RNU6-182P-201ENST00000516970 105 ntBASIC0.66□□□□□ -2.3
RAD9AQ99638 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
RAD9AQ99638 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
RAD9AQ99638 RNU6-364P-201ENST00000384387 107 ntBASIC0.65□□□□□ -2.31
RAD9AQ99638 MIR573-201ENST00000384964 99 ntBASIC0.65□□□□□ -2.31
RAD9AQ99638 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.65□□□□□ -2.31
RAD9AQ99638 RNA5SP144-201ENST00000410846 116 ntBASIC0.65□□□□□ -2.31
RAD9AQ99638 COX6CP6-201ENST00000490840 228 ntBASIC0.65□□□□□ -2.31
RAD9AQ99638 RNA5SP121-201ENST00000516537 101 ntBASIC0.65□□□□□ -2.31
RAD9AQ99638 RNU6-1258P-201ENST00000516911 111 ntBASIC0.65□□□□□ -2.31
RAD9AQ99638 AC141846.1-201ENST00000568348 142 ntBASIC0.65□□□□□ -2.31
RAD9AQ99638 AC090425.1-201ENST00000610007 140 ntBASIC0.65□□□□□ -2.31
RAD9AQ99638 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
RAD9AQ99638 Y_RNA.68-201ENST00000362881 102 ntBASIC0.64□□□□□ -2.31
RAD9AQ99638 Y_RNA.171-201ENST00000363760 102 ntBASIC0.64□□□□□ -2.31
RAD9AQ99638 RNA5SP499-201ENST00000363982 119 ntBASIC0.64□□□□□ -2.31
RAD9AQ99638 RNU6-690P-201ENST00000365242 106 ntBASIC0.64□□□□□ -2.31
RAD9AQ99638 SNORD18B-201ENST00000365659 72 ntBASIC0.64□□□□□ -2.31
RAD9AQ99638 SNORA18-201ENST00000384416 132 ntBASIC0.64□□□□□ -2.31
RAD9AQ99638 Y_RNA.584-201ENST00000391090 114 ntBASIC0.64□□□□□ -2.31
RAD9AQ99638 SNORD93-201ENST00000408813 74 ntBASIC0.64□□□□□ -2.31
RAD9AQ99638 RNU6-447P-201ENST00000410293 104 ntBASIC0.64□□□□□ -2.31
RAD9AQ99638 RNU6-1118P-201ENST00000410382 104 ntBASIC0.64□□□□□ -2.31
RAD9AQ99638 RNU6-1076P-201ENST00000410397 104 ntBASIC0.64□□□□□ -2.31
RAD9AQ99638 RNU6-355P-201ENST00000410427 104 ntBASIC0.64□□□□□ -2.31
RAD9AQ99638 RNU6-791P-201ENST00000410467 104 ntBASIC0.64□□□□□ -2.31
RAD9AQ99638 RNU6-705P-201ENST00000410601 104 ntBASIC0.64□□□□□ -2.31
RAD9AQ99638 RNU6-1100P-201ENST00000410691 104 ntBASIC0.64□□□□□ -2.31
RAD9AQ99638 RNU6-860P-201ENST00000410860 104 ntBASIC0.64□□□□□ -2.31
RAD9AQ99638 RNA5SP222-201ENST00000411039 105 ntBASIC0.64□□□□□ -2.31
RAD9AQ99638 RNU6-1217P-201ENST00000411276 104 ntBASIC0.64□□□□□ -2.31
RAD9AQ99638 RNU6-785P-201ENST00000411324 104 ntBASIC0.64□□□□□ -2.31
RAD9AQ99638 RNU7-156P-201ENST00000517214 74 ntBASIC0.64□□□□□ -2.31
RAD9AQ99638 RNU2-60P-201ENST00000517290 128 ntBASIC0.64□□□□□ -2.31
RAD9AQ99638 AC011603.4-201ENST00000611325 277 ntBASIC0.64□□□□□ -2.31
RAD9AQ99638 U6.90-201ENST00000614007 104 ntBASIC0.64□□□□□ -2.31
RAD9AQ99638 U6.70-201ENST00000620287 104 ntBASIC0.64□□□□□ -2.31
RAD9AQ99638 MIR5087-201ENST00000635826 76 ntBASIC0.64□□□□□ -2.31
RAD9AQ99638 RNY1P11-201ENST00000363759 113 ntBASIC0.63□□□□□ -2.31
RAD9AQ99638 Y_RNA.178-201ENST00000363832 102 ntBASIC0.63□□□□□ -2.31
RAD9AQ99638 RNU6-716P-201ENST00000365621 103 ntBASIC0.63□□□□□ -2.31
RAD9AQ99638 AL022718.1-201ENST00000412004 84 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 211.4 ms