Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AL731563.1-201ENST00000442202 214 ntBASIC-0.7□□□□□ -2.52
VAT1Q99536 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.7□□□□□ -2.52
VAT1Q99536 RNU7-35P-201ENST00000517174 62 ntBASIC-0.7□□□□□ -2.52
VAT1Q99536 AC105081.1-201ENST00000617727 106 ntBASIC-0.7□□□□□ -2.52
VAT1Q99536 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.71□□□□□ -2.52
VAT1Q99536 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.71□□□□□ -2.52
VAT1Q99536 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.71□□□□□ -2.52
VAT1Q99536 Z95118.1-201ENST00000421372 247 ntBASIC-0.71□□□□□ -2.52
VAT1Q99536 RNU4-73P-201ENST00000363164 141 ntBASIC-0.72□□□□□ -2.52
VAT1Q99536 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.72□□□□□ -2.52
VAT1Q99536 RNU6-509P-201ENST00000363519 107 ntBASIC-0.72□□□□□ -2.52
VAT1Q99536 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.72□□□□□ -2.52
VAT1Q99536 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.72□□□□□ -2.52
VAT1Q99536 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.72□□□□□ -2.52
VAT1Q99536 RNY3P5-201ENST00000384127 102 ntBASIC-0.72□□□□□ -2.52
VAT1Q99536 MT-TT-201ENST00000387460 66 ntBASIC-0.72□□□□□ -2.52
VAT1Q99536 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.72□□□□□ -2.52
VAT1Q99536 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.72□□□□□ -2.52
VAT1Q99536 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.72□□□□□ -2.52
VAT1Q99536 AC112487.2-201ENST00000637950 304 ntBASIC-0.72□□□□□ -2.52
VAT1Q99536 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.72□□□□□ -2.53
VAT1Q99536 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.73□□□□□ -2.53
VAT1Q99536 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.73□□□□□ -2.53
VAT1Q99536 SNORA25.7-201ENST00000364375 127 ntBASIC-0.73□□□□□ -2.53
VAT1Q99536 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.73□□□□□ -2.53
VAT1Q99536 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.73□□□□□ -2.53
VAT1Q99536 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.73□□□□□ -2.53
VAT1Q99536 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.73□□□□□ -2.53
VAT1Q99536 MTND4LP30-201ENST00000454092 297 ntBASIC-0.73□□□□□ -2.53
VAT1Q99536 RNU6-758P-201ENST00000516292 89 ntBASIC-0.73□□□□□ -2.53
VAT1Q99536 SNORA27.4-201ENST00000516650 95 ntBASIC-0.73□□□□□ -2.53
VAT1Q99536 AL391099.1-201ENST00000624635 187 ntBASIC-0.73□□□□□ -2.53
VAT1Q99536 SNORA25.1-201ENST00000362326 128 ntBASIC-0.74□□□□□ -2.53
VAT1Q99536 RNU4-16P-201ENST00000364737 141 ntBASIC-0.74□□□□□ -2.53
VAT1Q99536 RNU6-290P-201ENST00000365212 101 ntBASIC-0.74□□□□□ -2.53
VAT1Q99536 RNU6-449P-201ENST00000383914 107 ntBASIC-0.74□□□□□ -2.53
VAT1Q99536 RNU6-893P-201ENST00000458841 100 ntBASIC-0.74□□□□□ -2.53
VAT1Q99536 RNU7-70P-201ENST00000516941 66 ntBASIC-0.74□□□□□ -2.53
VAT1Q99536 RNU7-188P-201ENST00000517063 64 ntBASIC-0.74□□□□□ -2.53
VAT1Q99536 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.74□□□□□ -2.53
VAT1Q99536 MIR548H5-201ENST00000580314 60 ntBASIC-0.74□□□□□ -2.53
VAT1Q99536 RNU6-326P-201ENST00000365480 107 ntBASIC-0.75□□□□□ -2.53
VAT1Q99536 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.75□□□□□ -2.53
VAT1Q99536 MIR224-201ENST00000384889 81 ntBASIC-0.75□□□□□ -2.53
VAT1Q99536 MIR599-201ENST00000385069 95 ntBASIC-0.75□□□□□ -2.53
VAT1Q99536 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.75□□□□□ -2.53
VAT1Q99536 MIR1302-11-201ENST00000408051 138 ntBASIC-0.75□□□□□ -2.53
VAT1Q99536 MIR1302-9-201ENST00000408365 138 ntBASIC-0.75□□□□□ -2.53
VAT1Q99536 MIR1302-10-201ENST00000408734 138 ntBASIC-0.75□□□□□ -2.53
VAT1Q99536 RPS29P8-201ENST00000445109 171 ntBASIC-0.75□□□□□ -2.53
VAT1Q99536 TRAJ51-201ENST00000504127 63 ntBASIC-0.75□□□□□ -2.53
VAT1Q99536 RNU6-976P-201ENST00000516086 111 ntBASIC-0.75□□□□□ -2.53
VAT1Q99536 RNU7-137P-201ENST00000516788 62 ntBASIC-0.75□□□□□ -2.53
VAT1Q99536 MIR3920-201ENST00000581751 86 ntBASIC-0.75□□□□□ -2.53
VAT1Q99536 AC096720.1-201ENST00000604441 183 ntBASIC-0.75□□□□□ -2.53
VAT1Q99536 MIR1302-2-201ENST00000607096 138 ntBASIC-0.75□□□□□ -2.53
VAT1Q99536 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-0.75□□□□□ -2.53
VAT1Q99536 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.76□□□□□ -2.53
VAT1Q99536 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.76□□□□□ -2.53
VAT1Q99536 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.76□□□□□ -2.53
VAT1Q99536 RNU4-70P-201ENST00000384579 139 ntBASIC-0.76□□□□□ -2.53
VAT1Q99536 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.76□□□□□ -2.53
VAT1Q99536 AL359881.1-201ENST00000602916 267 ntBASIC-0.76□□□□□ -2.53
VAT1Q99536 AC098479.1-201ENST00000609225 154 ntBASIC-0.76□□□□□ -2.53
VAT1Q99536 MIR1302-1-201ENST00000637932 143 ntBASIC-0.76□□□□□ -2.53
VAT1Q99536 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.77□□□□□ -2.53
VAT1Q99536 RNU4-84P-201ENST00000364200 139 ntBASIC-0.77□□□□□ -2.53
VAT1Q99536 RNU6-211P-201ENST00000384047 107 ntBASIC-0.77□□□□□ -2.53
VAT1Q99536 AL606845.1-201ENST00000404881 255 ntBASIC-0.77□□□□□ -2.53
VAT1Q99536 SNORD75.1-201ENST00000408373 60 ntBASIC-0.77□□□□□ -2.53
VAT1Q99536 MIR4473-201ENST00000583731 91 ntBASIC-0.77□□□□□ -2.53
VAT1Q99536 AL365205.2-201ENST00000594586 68 ntBASIC-0.77□□□□□ -2.53
VAT1Q99536 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.78□□□□□ -2.53
VAT1Q99536 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.78□□□□□ -2.53
VAT1Q99536 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.78□□□□□ -2.53
VAT1Q99536 RNU6-429P-201ENST00000384582 108 ntBASIC-0.78□□□□□ -2.53
VAT1Q99536 SNORA53-201ENST00000391141 249 ntBASIC-0.78□□□□□ -2.53
VAT1Q99536 AL022718.1-201ENST00000412004 84 ntBASIC-0.78□□□□□ -2.53
VAT1Q99536 MTND4P19-201ENST00000446659 478 ntBASIC-0.78□□□□□ -2.53
VAT1Q99536 AC097635.1-201ENST00000450678 155 ntBASIC-0.78□□□□□ -2.53
VAT1Q99536 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.78□□□□□ -2.53
VAT1Q99536 SNORD67.1-201ENST00000516618 108 ntBASIC-0.78□□□□□ -2.53
VAT1Q99536 RNU6-453P-201ENST00000516819 85 ntBASIC-0.78□□□□□ -2.53
VAT1Q99536 RNA5SP66-201ENST00000517178 101 ntBASIC-0.78□□□□□ -2.53
VAT1Q99536 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.78□□□□□ -2.53
VAT1Q99536 AC108676.2-201ENST00000605225 163 ntBASIC-0.78□□□□□ -2.53
VAT1Q99536 AC037487.3-201ENST00000606668 112 ntBASIC-0.78□□□□□ -2.53
VAT1Q99536 SNORD114-14-201ENST00000362723 75 ntBASIC-0.79□□□□□ -2.54
VAT1Q99536 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.79□□□□□ -2.54
VAT1Q99536 RNU1-141P-201ENST00000364623 158 ntBASIC-0.79□□□□□ -2.54
VAT1Q99536 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.79□□□□□ -2.54
VAT1Q99536 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.79□□□□□ -2.54
VAT1Q99536 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.79□□□□□ -2.54
VAT1Q99536 RNU6-35P-201ENST00000384530 107 ntBASIC-0.79□□□□□ -2.54
VAT1Q99536 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.79□□□□□ -2.54
VAT1Q99536 MIR1265-201ENST00000408444 86 ntBASIC-0.79□□□□□ -2.54
VAT1Q99536 RNU6-121P-201ENST00000410525 99 ntBASIC-0.79□□□□□ -2.54
VAT1Q99536 AC098614.3-201ENST00000438957 440 ntBASIC-0.79□□□□□ -2.54
VAT1Q99536 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.79□□□□□ -2.54
VAT1Q99536 SCARNA15-202ENST00000516881 127 ntBASIC-0.79□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms