Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RNU1-98P-201ENST00000458992 160 ntBASIC1.94□□□□□ -2.1
CDK5RAP1Q96SZ6 RN7SL274P-201ENST00000492268 272 ntBASIC1.94□□□□□ -2.1
CDK5RAP1Q96SZ6 MIR8055-201ENST00000610739 97 ntBASIC1.94□□□□□ -2.1
CDK5RAP1Q96SZ6 MIR6845-201ENST00000613182 61 ntBASIC1.94□□□□□ -2.1
CDK5RAP1Q96SZ6 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.94□□□□□ -2.1
CDK5RAP1Q96SZ6 RNA5SP276-201ENST00000362580 94 ntBASIC1.93□□□□□ -2.1
CDK5RAP1Q96SZ6 MIR660-201ENST00000385235 97 ntBASIC1.93□□□□□ -2.1
CDK5RAP1Q96SZ6 RNU6-1086P-201ENST00000410930 100 ntBASIC1.93□□□□□ -2.1
CDK5RAP1Q96SZ6 RPS29P28-201ENST00000446439 141 ntBASIC1.93□□□□□ -2.1
CDK5RAP1Q96SZ6 RNA5SP445-201ENST00000515889 115 ntBASIC1.93□□□□□ -2.1
CDK5RAP1Q96SZ6 RNU6-548P-201ENST00000517083 115 ntBASIC1.93□□□□□ -2.1
CDK5RAP1Q96SZ6 RNU7-35P-201ENST00000517174 62 ntBASIC1.93□□□□□ -2.1
CDK5RAP1Q96SZ6 AC012493.3-201ENST00000604494 112 ntBASIC1.93□□□□□ -2.1
CDK5RAP1Q96SZ6 SNORD3E-202ENST00000627253 216 ntBASIC1.93□□□□□ -2.1
CDK5RAP1Q96SZ6 RNU6-112P-201ENST00000363599 104 ntBASIC1.92□□□□□ -2.1
CDK5RAP1Q96SZ6 RNU6-1244P-201ENST00000363614 108 ntBASIC1.92□□□□□ -2.1
CDK5RAP1Q96SZ6 Y_RNA.426-201ENST00000384068 113 ntBASIC1.92□□□□□ -2.1
CDK5RAP1Q96SZ6 RNU6-524P-201ENST00000384270 107 ntBASIC1.92□□□□□ -2.1
CDK5RAP1Q96SZ6 MIR29C-201ENST00000385231 88 ntBASIC1.92□□□□□ -2.1
CDK5RAP1Q96SZ6 SNORA40.18-201ENST00000391200 128 ntBASIC1.92□□□□□ -2.1
CDK5RAP1Q96SZ6 RNA5SP212-201ENST00000391223 107 ntBASIC1.92□□□□□ -2.1
CDK5RAP1Q96SZ6 AC244636.1-201ENST00000421152 228 ntBASIC1.92□□□□□ -2.1
CDK5RAP1Q96SZ6 AL591806.2-201ENST00000433122 173 ntBASIC1.92□□□□□ -2.1
CDK5RAP1Q96SZ6 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CDK5RAP1Q96SZ6 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
CDK5RAP1Q96SZ6 Y_RNA.94-201ENST00000363068 106 ntBASIC1.91□□□□□ -2.1
CDK5RAP1Q96SZ6 Y_RNA.316-201ENST00000365118 111 ntBASIC1.91□□□□□ -2.1
CDK5RAP1Q96SZ6 SUMO2P12-201ENST00000405924 140 ntBASIC1.91□□□□□ -2.1
CDK5RAP1Q96SZ6 RNU6-602P-201ENST00000411155 105 ntBASIC1.91□□□□□ -2.1
CDK5RAP1Q96SZ6 AC108210.2-201ENST00000503681 201 ntBASIC1.91□□□□□ -2.1
CDK5RAP1Q96SZ6 SUB1P4-201ENST00000566062 339 ntBASIC1.91□□□□□ -2.1
CDK5RAP1Q96SZ6 MIR4709-201ENST00000577272 72 ntBASIC1.91□□□□□ -2.1
CDK5RAP1Q96SZ6 MIR548AO-201ENST00000579992 96 ntBASIC1.91□□□□□ -2.1
CDK5RAP1Q96SZ6 SNRPGP19-201ENST00000603826 189 ntBASIC1.91□□□□□ -2.1
CDK5RAP1Q96SZ6 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.91□□□□□ -2.1
CDK5RAP1Q96SZ6 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.91□□□□□ -2.1
CDK5RAP1Q96SZ6 RNU6-633P-201ENST00000362612 103 ntBASIC1.9□□□□□ -2.11
CDK5RAP1Q96SZ6 Y_RNA.96-201ENST00000363092 109 ntBASIC1.9□□□□□ -2.11
CDK5RAP1Q96SZ6 SNORD38.1-201ENST00000363863 68 ntBASIC1.9□□□□□ -2.11
CDK5RAP1Q96SZ6 RNU6-24P-201ENST00000384440 107 ntBASIC1.9□□□□□ -2.11
CDK5RAP1Q96SZ6 MIR520A-201ENST00000384862 85 ntBASIC1.9□□□□□ -2.11
CDK5RAP1Q96SZ6 MIR548G-201ENST00000408442 89 ntBASIC1.9□□□□□ -2.11
CDK5RAP1Q96SZ6 RPL31P63-201ENST00000422565 375 ntBASIC1.9□□□□□ -2.11
CDK5RAP1Q96SZ6 RNU7-79P-201ENST00000516082 62 ntBASIC1.9□□□□□ -2.11
CDK5RAP1Q96SZ6 RNU6-917P-201ENST00000516294 104 ntBASIC1.9□□□□□ -2.11
CDK5RAP1Q96SZ6 RNU7-137P-201ENST00000516788 62 ntBASIC1.9□□□□□ -2.11
CDK5RAP1Q96SZ6 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.9□□□□□ -2.11
CDK5RAP1Q96SZ6 MIR4524B-201ENST00000581569 115 ntBASIC1.9□□□□□ -2.11
CDK5RAP1Q96SZ6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.9□□□□□ -2.11
CDK5RAP1Q96SZ6 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.9□□□□□ -2.11
CDK5RAP1Q96SZ6 SNORA16.1-201ENST00000364597 132 ntBASIC1.89□□□□□ -2.11
CDK5RAP1Q96SZ6 RNU6-1296P-201ENST00000383879 107 ntBASIC1.89□□□□□ -2.11
CDK5RAP1Q96SZ6 Y_RNA.567-201ENST00000384736 106 ntBASIC1.89□□□□□ -2.11
CDK5RAP1Q96SZ6 MIR181B2-201ENST00000385004 89 ntBASIC1.89□□□□□ -2.11
CDK5RAP1Q96SZ6 SNORA48.1-201ENST00000390879 135 ntBASIC1.89□□□□□ -2.11
CDK5RAP1Q96SZ6 SPINT5P-201ENST00000448174 155 ntBASIC1.89□□□□□ -2.11
CDK5RAP1Q96SZ6 snoU13.27-201ENST00000459278 104 ntBASIC1.89□□□□□ -2.11
CDK5RAP1Q96SZ6 SNORA74.3-201ENST00000517108 154 ntBASIC1.89□□□□□ -2.11
CDK5RAP1Q96SZ6 AL513043.2-201ENST00000573941 143 ntBASIC1.89□□□□□ -2.11
CDK5RAP1Q96SZ6 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.89□□□□□ -2.11
CDK5RAP1Q96SZ6 MIR4439-201ENST00000583746 80 ntBASIC1.89□□□□□ -2.11
CDK5RAP1Q96SZ6 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.89□□□□□ -2.11
CDK5RAP1Q96SZ6 AL513423.1-201ENST00000621695 132 ntBASIC1.89□□□□□ -2.11
CDK5RAP1Q96SZ6 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.89□□□□□ -2.11
CDK5RAP1Q96SZ6 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.88□□□□□ -2.11
CDK5RAP1Q96SZ6 RNU6-776P-201ENST00000364403 104 ntBASIC1.88□□□□□ -2.11
CDK5RAP1Q96SZ6 RNU6-1022P-201ENST00000365049 104 ntBASIC1.88□□□□□ -2.11
CDK5RAP1Q96SZ6 RNU6-203P-201ENST00000384038 104 ntBASIC1.88□□□□□ -2.11
CDK5RAP1Q96SZ6 Y_RNA.537-201ENST00000384626 109 ntBASIC1.88□□□□□ -2.11
CDK5RAP1Q96SZ6 RNA5SP261-201ENST00000410536 106 ntBASIC1.88□□□□□ -2.11
CDK5RAP1Q96SZ6 AC015712.3-201ENST00000559380 164 ntBASIC1.88□□□□□ -2.11
CDK5RAP1Q96SZ6 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.88□□□□□ -2.11
CDK5RAP1Q96SZ6 AC008133.2-201ENST00000624540 351 ntBASIC1.88□□□□□ -2.11
CDK5RAP1Q96SZ6 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.88□□□□□ -2.11
CDK5RAP1Q96SZ6 RNU6-865P-201ENST00000364772 107 ntBASIC1.87□□□□□ -2.11
CDK5RAP1Q96SZ6 RNU6-950P-201ENST00000384651 107 ntBASIC1.87□□□□□ -2.11
CDK5RAP1Q96SZ6 MIR9-3-201ENST00000385084 90 ntBASIC1.87□□□□□ -2.11
CDK5RAP1Q96SZ6 RNA5SP489-201ENST00000410986 109 ntBASIC1.87□□□□□ -2.11
CDK5RAP1Q96SZ6 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.87□□□□□ -2.11
CDK5RAP1Q96SZ6 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.87□□□□□ -2.11
CDK5RAP1Q96SZ6 snoU13.16-201ENST00000459350 104 ntBASIC1.87□□□□□ -2.11
CDK5RAP1Q96SZ6 RNU7-41P-201ENST00000515917 61 ntBASIC1.87□□□□□ -2.11
CDK5RAP1Q96SZ6 RNU7-153P-201ENST00000516455 62 ntBASIC1.87□□□□□ -2.11
CDK5RAP1Q96SZ6 MIR4764-201ENST00000580680 88 ntBASIC1.87□□□□□ -2.11
CDK5RAP1Q96SZ6 AC012676.2-201ENST00000619258 186 ntBASIC1.87□□□□□ -2.11
CDK5RAP1Q96SZ6 AC084768.2-201ENST00000622736 221 ntBASIC1.87□□□□□ -2.11
CDK5RAP1Q96SZ6 Z97988.1-201ENST00000637697 135 ntBASIC1.87□□□□□ -2.11
CDK5RAP1Q96SZ6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
CDK5RAP1Q96SZ6 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CDK5RAP1Q96SZ6 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CDK5RAP1Q96SZ6 RNY1P13-201ENST00000365030 105 ntBASIC1.86□□□□□ -2.11
CDK5RAP1Q96SZ6 RNA5SP465-201ENST00000391195 109 ntBASIC1.86□□□□□ -2.11
CDK5RAP1Q96SZ6 Y_RNA.607-201ENST00000410597 98 ntBASIC1.86□□□□□ -2.11
CDK5RAP1Q96SZ6 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.86□□□□□ -2.11
CDK5RAP1Q96SZ6 AC003989.2-201ENST00000440224 169 ntBASIC1.86□□□□□ -2.11
CDK5RAP1Q96SZ6 SNORA31.17-201ENST00000516953 127 ntBASIC1.86□□□□□ -2.11
CDK5RAP1Q96SZ6 MIR4255-201ENST00000579351 72 ntBASIC1.86□□□□□ -2.11
CDK5RAP1Q96SZ6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.86□□□□□ -2.11
CDK5RAP1Q96SZ6 SNORA2B-201ENST00000384583 137 ntBASIC1.85□□□□□ -2.11
CDK5RAP1Q96SZ6 RNU7-48P-201ENST00000458875 63 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms