Protein–RNA interactions for Protein: Q96QS3

ARX, Homeobox protein ARX, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARXQ96QS3 RNU6-947P-201ENST00000516264 106 ntBASIC2.59□□□□□ -1.99
ARXQ96QS3 DEFB131E-201ENST00000532329 154 ntBASIC2.59□□□□□ -1.99
ARXQ96QS3 MIR3618-201ENST00000580330 88 ntBASIC2.59□□□□□ -1.99
ARXQ96QS3 AL161722.3-201ENST00000605789 2983 ntBASIC2.58□□□□□ -2
ARXQ96QS3 RNU4-67P-201ENST00000364569 141 ntBASIC2.58□□□□□ -2
ARXQ96QS3 RNU6-1190P-201ENST00000410811 104 ntBASIC2.58□□□□□ -2
ARXQ96QS3 SNORA25.15-201ENST00000516487 89 ntBASIC2.58□□□□□ -2
ARXQ96QS3 MIR548AE2-201ENST00000583456 67 ntBASIC2.58□□□□□ -2
ARXQ96QS3 MIR4251-201ENST00000635819 61 ntBASIC2.58□□□□□ -2
ARXQ96QS3 Y_RNA.369-201ENST00000365568 117 ntBASIC2.57□□□□□ -2
ARXQ96QS3 MIR590-201ENST00000385008 97 ntBASIC2.57□□□□□ -2
ARXQ96QS3 MIR1276-201ENST00000408707 83 ntBASIC2.57□□□□□ -2
ARXQ96QS3 RNU6-1258P-201ENST00000516911 111 ntBASIC2.57□□□□□ -2
ARXQ96QS3 MIR3935-201ENST00000583472 104 ntBASIC2.57□□□□□ -2
ARXQ96QS3 MIR8055-201ENST00000610739 97 ntBASIC2.57□□□□□ -2
ARXQ96QS3 RNA5SP48-201ENST00000363969 126 ntBASIC2.56□□□□□ -2
ARXQ96QS3 Y_RNA.348-201ENST00000365403 103 ntBASIC2.56□□□□□ -2
ARXQ96QS3 Y_RNA.470-201ENST00000384307 117 ntBASIC2.56□□□□□ -2
ARXQ96QS3 RNU6-904P-201ENST00000516206 101 ntBASIC2.56□□□□□ -2
ARXQ96QS3 MIR4694-201ENST00000578534 80 ntBASIC2.56□□□□□ -2
ARXQ96QS3 MIR5582-201ENST00000579697 68 ntBASIC2.56□□□□□ -2
ARXQ96QS3 MIR6504-201ENST00000613520 61 ntBASIC2.56□□□□□ -2
ARXQ96QS3 Z97988.1-201ENST00000637697 135 ntBASIC2.56□□□□□ -2
ARXQ96QS3 RNU6-158P-201ENST00000517104 100 ntBASIC2.55□□□□□ -2
ARXQ96QS3 RNY3P2-201ENST00000362918 102 ntBASIC2.54□□□□□ -2
ARXQ96QS3 RNU6-905P-201ENST00000384434 107 ntBASIC2.54□□□□□ -2
ARXQ96QS3 HMGN1P33-201ENST00000432945 451 ntBASIC2.54□□□□□ -2
ARXQ96QS3 AC245047.7-201ENST00000440265 293 ntBASIC2.54□□□□□ -2
ARXQ96QS3 RPS29P23-201ENST00000458635 123 ntBASIC2.54□□□□□ -2
ARXQ96QS3 SNORD111.1-201ENST00000516421 86 ntBASIC2.54□□□□□ -2
ARXQ96QS3 RNU6-250P-201ENST00000516958 103 ntBASIC2.54□□□□□ -2
ARXQ96QS3 Y_RNA.773-201ENST00000607168 90 ntBASIC2.54□□□□□ -2
ARXQ96QS3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
ARXQ96QS3 Y_RNA.93-201ENST00000363066 109 ntBASIC2.53□□□□□ -2
ARXQ96QS3 SNORA32-201ENST00000384072 121 ntBASIC2.53□□□□□ -2
ARXQ96QS3 SNORD38B-201ENST00000384690 67 ntBASIC2.53□□□□□ -2
ARXQ96QS3 Y_RNA.601-201ENST00000410500 113 ntBASIC2.53□□□□□ -2
ARXQ96QS3 SNORD38B-202ENST00000625943 69 ntBASIC2.53□□□□□ -2
ARXQ96QS3 MIR1255B1-201ENST00000636325 63 ntBASIC2.53□□□□□ -2
ARXQ96QS3 Y_RNA.107-201ENST00000363190 121 ntBASIC2.52□□□□□ -2.01
ARXQ96QS3 RNU6-616P-201ENST00000384353 107 ntBASIC2.52□□□□□ -2.01
ARXQ96QS3 AC003989.2-201ENST00000440224 169 ntBASIC2.52□□□□□ -2.01
ARXQ96QS3 SCARNA23-201ENST00000516060 130 ntBASIC2.52□□□□□ -2.01
ARXQ96QS3 SNORA7.5-201ENST00000410672 110 ntBASIC2.51□□□□□ -2.01
ARXQ96QS3 RNU6-1018P-201ENST00000516577 106 ntBASIC2.51□□□□□ -2.01
ARXQ96QS3 MIR4303-201ENST00000581299 66 ntBASIC2.51□□□□□ -2.01
ARXQ96QS3 Y_RNA.96-201ENST00000363092 109 ntBASIC2.5□□□□□ -2.01
ARXQ96QS3 RNU6-1099P-201ENST00000363533 107 ntBASIC2.5□□□□□ -2.01
ARXQ96QS3 RNU6-640P-201ENST00000363693 105 ntBASIC2.5□□□□□ -2.01
ARXQ96QS3 RNA5SP325-201ENST00000363756 130 ntBASIC2.5□□□□□ -2.01
ARXQ96QS3 Y_RNA.360-201ENST00000365512 102 ntBASIC2.5□□□□□ -2.01
ARXQ96QS3 RNU6-42P-201ENST00000384165 107 ntBASIC2.5□□□□□ -2.01
ARXQ96QS3 RNU6-109P-201ENST00000516364 107 ntBASIC2.5□□□□□ -2.01
ARXQ96QS3 RNU6-184P-201ENST00000516514 107 ntBASIC2.5□□□□□ -2.01
ARXQ96QS3 MIR5089-201ENST00000580047 84 ntBASIC2.5□□□□□ -2.01
ARXQ96QS3 AC096720.1-201ENST00000604441 183 ntBASIC2.5□□□□□ -2.01
ARXQ96QS3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
ARXQ96QS3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.5□□□□□ -2.01
ARXQ96QS3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
ARXQ96QS3 Y_RNA.220-201ENST00000364244 109 ntBASIC2.49□□□□□ -2.01
ARXQ96QS3 SNORA18-201ENST00000384416 132 ntBASIC2.49□□□□□ -2.01
ARXQ96QS3 SNORA19.1-201ENST00000410656 129 ntBASIC2.49□□□□□ -2.01
ARXQ96QS3 RNU6-602P-201ENST00000411155 105 ntBASIC2.49□□□□□ -2.01
ARXQ96QS3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.49□□□□□ -2.01
ARXQ96QS3 AL512310.12-203ENST00000640543 90 ntBASIC2.49□□□□□ -2.01
ARXQ96QS3 SNORD41-201ENST00000386967 70 ntBASIC2.48□□□□□ -2.01
ARXQ96QS3 SNORA67.5-201ENST00000391036 107 ntBASIC2.48□□□□□ -2.01
ARXQ96QS3 SNORA72.7-201ENST00000516349 94 ntBASIC2.48□□□□□ -2.01
ARXQ96QS3 MIR3122-201ENST00000577243 73 ntBASIC2.48□□□□□ -2.01
ARXQ96QS3 MIR548AO-201ENST00000579992 96 ntBASIC2.48□□□□□ -2.01
ARXQ96QS3 MIR8081-201ENST00000611533 95 ntBASIC2.48□□□□□ -2.01
ARXQ96QS3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.48□□□□□ -2.01
ARXQ96QS3 RNU6-832P-201ENST00000363319 107 ntBASIC2.47□□□□□ -2.01
ARXQ96QS3 MTATP8P2-201ENST00000435212 202 ntBASIC2.47□□□□□ -2.01
ARXQ96QS3 AC025033.1-201ENST00000463883 194 ntBASIC2.47□□□□□ -2.01
ARXQ96QS3 RNU7-41P-201ENST00000515917 61 ntBASIC2.47□□□□□ -2.01
ARXQ96QS3 RNU6-521P-201ENST00000516663 105 ntBASIC2.47□□□□□ -2.01
ARXQ96QS3 MIR5002-201ENST00000584713 97 ntBASIC2.47□□□□□ -2.01
ARXQ96QS3 SNORD45B-201ENST00000364617 72 ntBASIC2.46□□□□□ -2.02
ARXQ96QS3 RNU7-95P-201ENST00000459222 64 ntBASIC2.46□□□□□ -2.02
ARXQ96QS3 AC084768.2-201ENST00000622736 221 ntBASIC2.46□□□□□ -2.02
ARXQ96QS3 SNORA25.8-201ENST00000364831 128 ntBASIC2.45□□□□□ -2.02
ARXQ96QS3 Y_RNA.327-201ENST00000365201 102 ntBASIC2.45□□□□□ -2.02
ARXQ96QS3 Y_RNA.377-201ENST00000365644 108 ntBASIC2.45□□□□□ -2.02
ARXQ96QS3 RNU6-997P-201ENST00000384725 107 ntBASIC2.45□□□□□ -2.02
ARXQ96QS3 MIR605-201ENST00000385078 83 ntBASIC2.45□□□□□ -2.02
ARXQ96QS3 MIR577-201ENST00000385196 96 ntBASIC2.45□□□□□ -2.02
ARXQ96QS3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.45□□□□□ -2.02
ARXQ96QS3 RNA5SP237-201ENST00000410414 113 ntBASIC2.45□□□□□ -2.02
ARXQ96QS3 RNU6-1086P-201ENST00000410930 100 ntBASIC2.45□□□□□ -2.02
ARXQ96QS3 RNU7-35P-201ENST00000517174 62 ntBASIC2.45□□□□□ -2.02
ARXQ96QS3 RMST_2.1-201ENST00000617263 136 ntBASIC2.45□□□□□ -2.02
ARXQ96QS3 RNU6-392P-201ENST00000364926 101 ntBASIC2.44□□□□□ -2.02
ARXQ96QS3 SNORD115-35-201ENST00000365122 82 ntBASIC2.44□□□□□ -2.02
ARXQ96QS3 RNU6-342P-201ENST00000384521 104 ntBASIC2.44□□□□□ -2.02
ARXQ96QS3 AC009474.2-201ENST00000451383 136 ntBASIC2.44□□□□□ -2.02
ARXQ96QS3 RNU7-2P-201ENST00000516096 62 ntBASIC2.44□□□□□ -2.02
ARXQ96QS3 Y_RNA.191-201ENST00000363972 113 ntBASIC2.43□□□□□ -2.02
ARXQ96QS3 SNORD26-201ENST00000384147 75 ntBASIC2.43□□□□□ -2.02
ARXQ96QS3 RNU6-679P-201ENST00000391003 106 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 217.8 ms