Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 MIR539-201ENST00000365690 78 ntBASIC0.77□□□□□ -2.29
ZIM3Q96PE6 RNU6-1307P-201ENST00000391012 103 ntBASIC0.77□□□□□ -2.29
ZIM3Q96PE6 AC002429.1-201ENST00000437672 148 ntBASIC0.77□□□□□ -2.29
ZIM3Q96PE6 RNU5E-3P-201ENST00000515913 68 ntBASIC0.77□□□□□ -2.29
ZIM3Q96PE6 RNU7-35P-201ENST00000517174 62 ntBASIC0.77□□□□□ -2.29
ZIM3Q96PE6 AL359881.1-201ENST00000602916 267 ntBASIC0.77□□□□□ -2.29
ZIM3Q96PE6 AP000753.3-201ENST00000604083 169 ntBASIC0.77□□□□□ -2.29
ZIM3Q96PE6 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.77□□□□□ -2.29
ZIM3Q96PE6 AC106800.4-201ENST00000614905 153 ntBASIC0.77□□□□□ -2.29
ZIM3Q96PE6 AC087741.2-201ENST00000619415 172 ntBASIC0.77□□□□□ -2.29
ZIM3Q96PE6 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.77□□□□□ -2.29
ZIM3Q96PE6 MTND5P18-201ENST00000445624 1801 ntBASIC0.76□□□□□ -2.29
ZIM3Q96PE6 MIR302B-201ENST00000362188 73 ntBASIC0.76□□□□□ -2.29
ZIM3Q96PE6 RNU6-1067P-201ENST00000384752 107 ntBASIC0.76□□□□□ -2.29
ZIM3Q96PE6 MIR19B1-201ENST00000384829 87 ntBASIC0.76□□□□□ -2.29
ZIM3Q96PE6 AL606753.1-201ENST00000427435 87 ntBASIC0.76□□□□□ -2.29
ZIM3Q96PE6 AL353813.1-201ENST00000440700 253 ntBASIC0.76□□□□□ -2.29
ZIM3Q96PE6 MIR2115-201ENST00000516657 100 ntBASIC0.76□□□□□ -2.29
ZIM3Q96PE6 RNU6-789P-201ENST00000517105 102 ntBASIC0.76□□□□□ -2.29
ZIM3Q96PE6 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.76□□□□□ -2.29
ZIM3Q96PE6 MIR4524B-201ENST00000581569 115 ntBASIC0.76□□□□□ -2.29
ZIM3Q96PE6 MIR4264-201ENST00000583520 66 ntBASIC0.76□□□□□ -2.29
ZIM3Q96PE6 RNY1P13-201ENST00000365030 105 ntBASIC0.75□□□□□ -2.29
ZIM3Q96PE6 RNU1-36P-201ENST00000365130 165 ntBASIC0.75□□□□□ -2.29
ZIM3Q96PE6 RNU6-396P-201ENST00000365369 105 ntBASIC0.75□□□□□ -2.29
ZIM3Q96PE6 SNORA18-201ENST00000384416 132 ntBASIC0.75□□□□□ -2.29
ZIM3Q96PE6 MIR588-201ENST00000384900 83 ntBASIC0.75□□□□□ -2.29
ZIM3Q96PE6 AC015818.7-201ENST00000428754 109 ntBASIC0.75□□□□□ -2.29
ZIM3Q96PE6 AC087499.7-201ENST00000441958 109 ntBASIC0.75□□□□□ -2.29
ZIM3Q96PE6 RNU6-479P-201ENST00000516348 105 ntBASIC0.75□□□□□ -2.29
ZIM3Q96PE6 RNU7-70P-201ENST00000516941 66 ntBASIC0.75□□□□□ -2.29
ZIM3Q96PE6 AC211469.2-201ENST00000605461 205 ntBASIC0.75□□□□□ -2.29
ZIM3Q96PE6 Y_RNA.773-201ENST00000607168 90 ntBASIC0.75□□□□□ -2.29
ZIM3Q96PE6 RNU6-94P-201ENST00000607728 107 ntBASIC0.75□□□□□ -2.29
ZIM3Q96PE6 AL662814.1-201ENST00000617364 121 ntBASIC0.75□□□□□ -2.29
ZIM3Q96PE6 AL035470.1-201ENST00000622571 220 ntBASIC0.75□□□□□ -2.29
ZIM3Q96PE6 AC008163.1-202ENST00000636004 2889 ntBASIC0.75□□□□□ -2.29
ZIM3Q96PE6 Y_RNA.198-201ENST00000364013 98 ntBASIC0.74□□□□□ -2.29
ZIM3Q96PE6 Y_RNA.344-201ENST00000365381 112 ntBASIC0.74□□□□□ -2.29
ZIM3Q96PE6 SNORA80D-201ENST00000384488 135 ntBASIC0.74□□□□□ -2.29
ZIM3Q96PE6 RNU6-1117P-201ENST00000384525 104 ntBASIC0.74□□□□□ -2.29
ZIM3Q96PE6 Y_RNA.528-201ENST00000384575 108 ntBASIC0.74□□□□□ -2.29
ZIM3Q96PE6 SNORD38B-201ENST00000384690 67 ntBASIC0.74□□□□□ -2.29
ZIM3Q96PE6 SNORD12-201ENST00000391002 90 ntBASIC0.74□□□□□ -2.29
ZIM3Q96PE6 MIR1263-201ENST00000408324 86 ntBASIC0.74□□□□□ -2.29
ZIM3Q96PE6 MIR548I2-201ENST00000408348 149 ntBASIC0.74□□□□□ -2.29
ZIM3Q96PE6 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.74□□□□□ -2.29
ZIM3Q96PE6 RNU7-113P-201ENST00000459273 62 ntBASIC0.74□□□□□ -2.29
ZIM3Q96PE6 COX6CP6-201ENST00000490840 228 ntBASIC0.74□□□□□ -2.29
ZIM3Q96PE6 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.74□□□□□ -2.29
ZIM3Q96PE6 RNU6-1061P-201ENST00000516530 99 ntBASIC0.74□□□□□ -2.29
ZIM3Q96PE6 AC141846.1-201ENST00000568348 142 ntBASIC0.74□□□□□ -2.29
ZIM3Q96PE6 AC023827.1-201ENST00000569247 97 ntBASIC0.74□□□□□ -2.29
ZIM3Q96PE6 AC025166.1-201ENST00000612411 163 ntBASIC0.74□□□□□ -2.29
ZIM3Q96PE6 SNORD38B-202ENST00000625943 69 ntBASIC0.74□□□□□ -2.29
ZIM3Q96PE6 SNORD115-19-201ENST00000363098 82 ntBASIC0.73□□□□□ -2.29
ZIM3Q96PE6 SNORD115-18-201ENST00000363293 82 ntBASIC0.73□□□□□ -2.29
ZIM3Q96PE6 SNORD115-17-201ENST00000364612 82 ntBASIC0.73□□□□□ -2.29
ZIM3Q96PE6 SNORA32-201ENST00000384072 121 ntBASIC0.73□□□□□ -2.29
ZIM3Q96PE6 RNU6-429P-201ENST00000384582 108 ntBASIC0.73□□□□□ -2.29
ZIM3Q96PE6 Y_RNA.549-201ENST00000384657 102 ntBASIC0.73□□□□□ -2.29
ZIM3Q96PE6 MIR222-201ENST00000384992 110 ntBASIC0.73□□□□□ -2.29
ZIM3Q96PE6 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
ZIM3Q96PE6 RNU6-1165P-201ENST00000410119 107 ntBASIC0.73□□□□□ -2.29
ZIM3Q96PE6 RNA5SP136-201ENST00000410906 107 ntBASIC0.73□□□□□ -2.29
ZIM3Q96PE6 AL022718.1-201ENST00000412004 84 ntBASIC0.73□□□□□ -2.29
ZIM3Q96PE6 RNU7-62P-201ENST00000458856 62 ntBASIC0.73□□□□□ -2.29
ZIM3Q96PE6 SNORA70.22-201ENST00000517160 124 ntBASIC0.73□□□□□ -2.29
ZIM3Q96PE6 MIR3973-201ENST00000579824 107 ntBASIC0.73□□□□□ -2.29
ZIM3Q96PE6 MIR4781-201ENST00000585250 76 ntBASIC0.73□□□□□ -2.29
ZIM3Q96PE6 snoU13.31-201ENST00000607291 104 ntBASIC0.73□□□□□ -2.29
ZIM3Q96PE6 MIR1255B1-201ENST00000636325 63 ntBASIC0.73□□□□□ -2.29
ZIM3Q96PE6 MIR6866-201ENST00000638146 69 ntBASIC0.73□□□□□ -2.29
ZIM3Q96PE6 SNORD113.3-201ENST00000364630 78 ntBASIC0.72□□□□□ -2.29
ZIM3Q96PE6 Y_RNA.330-201ENST00000365230 109 ntBASIC0.72□□□□□ -2.29
ZIM3Q96PE6 U8.15-201ENST00000390947 134 ntBASIC0.72□□□□□ -2.29
ZIM3Q96PE6 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.72□□□□□ -2.29
ZIM3Q96PE6 RNA5SP261-201ENST00000410536 106 ntBASIC0.72□□□□□ -2.29
ZIM3Q96PE6 RNU2-51P-201ENST00000410708 197 ntBASIC0.72□□□□□ -2.29
ZIM3Q96PE6 SNORD83.1-201ENST00000411362 77 ntBASIC0.72□□□□□ -2.29
ZIM3Q96PE6 AC063976.4-201ENST00000421971 163 ntBASIC0.72□□□□□ -2.29
ZIM3Q96PE6 AC004941.2-201ENST00000427009 228 ntBASIC0.72□□□□□ -2.29
ZIM3Q96PE6 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.72□□□□□ -2.29
ZIM3Q96PE6 AC008267.6-201ENST00000441664 139 ntBASIC0.72□□□□□ -2.29
ZIM3Q96PE6 RNU7-90P-201ENST00000459216 62 ntBASIC0.72□□□□□ -2.29
ZIM3Q96PE6 SNORD124-201ENST00000459577 104 ntBASIC0.72□□□□□ -2.29
ZIM3Q96PE6 RNA5SP33-201ENST00000516687 98 ntBASIC0.72□□□□□ -2.29
ZIM3Q96PE6 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.72□□□□□ -2.29
ZIM3Q96PE6 MIR3152-201ENST00000579801 74 ntBASIC0.72□□□□□ -2.29
ZIM3Q96PE6 AC020891.4-201ENST00000605745 93 ntBASIC0.72□□□□□ -2.29
ZIM3Q96PE6 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.72□□□□□ -2.29
ZIM3Q96PE6 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.72□□□□□ -2.29
ZIM3Q96PE6 RNU6-1335P-201ENST00000365426 107 ntBASIC0.71□□□□□ -2.3
ZIM3Q96PE6 RNU6-949P-201ENST00000384040 107 ntBASIC0.71□□□□□ -2.3
ZIM3Q96PE6 SNORA2B-201ENST00000384583 137 ntBASIC0.71□□□□□ -2.3
ZIM3Q96PE6 Y_RNA.588-201ENST00000391254 102 ntBASIC0.71□□□□□ -2.3
ZIM3Q96PE6 RNU4-69P-201ENST00000410677 143 ntBASIC0.71□□□□□ -2.3
ZIM3Q96PE6 RNU6-1086P-201ENST00000410930 100 ntBASIC0.71□□□□□ -2.3
ZIM3Q96PE6 SNORD67.1-201ENST00000516618 108 ntBASIC0.71□□□□□ -2.3
ZIM3Q96PE6 RNU7-137P-201ENST00000516788 62 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms