Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MRPS18CP4-201ENST00000535821 231 ntBASIC0.34□□□□□ -2.36
COL21A1Q96P44 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.34□□□□□ -2.36
COL21A1Q96P44 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.34□□□□□ -2.36
COL21A1Q96P44 AC130289.1-201ENST00000577321 73 ntBASIC0.34□□□□□ -2.36
COL21A1Q96P44 MIR4804-201ENST00000581683 73 ntBASIC0.34□□□□□ -2.36
COL21A1Q96P44 AC009779.6-201ENST00000603972 165 ntBASIC0.34□□□□□ -2.36
COL21A1Q96P44 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.33□□□□□ -2.36
COL21A1Q96P44 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
COL21A1Q96P44 Y_RNA.75-201ENST00000362927 97 ntBASIC0.33□□□□□ -2.36
COL21A1Q96P44 Y_RNA.170-201ENST00000363746 110 ntBASIC0.33□□□□□ -2.36
COL21A1Q96P44 RNU4-67P-201ENST00000364569 141 ntBASIC0.33□□□□□ -2.36
COL21A1Q96P44 Y_RNA.435-201ENST00000384095 112 ntBASIC0.33□□□□□ -2.36
COL21A1Q96P44 Y_RNA.454-201ENST00000384224 113 ntBASIC0.33□□□□□ -2.36
COL21A1Q96P44 Y_RNA.549-201ENST00000384657 102 ntBASIC0.33□□□□□ -2.36
COL21A1Q96P44 MIR520F-201ENST00000384824 87 ntBASIC0.33□□□□□ -2.36
COL21A1Q96P44 MIR563-201ENST00000385080 79 ntBASIC0.33□□□□□ -2.36
COL21A1Q96P44 MIR520H-201ENST00000385126 88 ntBASIC0.33□□□□□ -2.36
COL21A1Q96P44 MIR624-201ENST00000385217 97 ntBASIC0.33□□□□□ -2.36
COL21A1Q96P44 RNA5SP222-201ENST00000411039 105 ntBASIC0.33□□□□□ -2.36
COL21A1Q96P44 RNU6-977P-201ENST00000516411 103 ntBASIC0.33□□□□□ -2.36
COL21A1Q96P44 RNU6-1149P-201ENST00000516810 97 ntBASIC0.33□□□□□ -2.36
COL21A1Q96P44 SCARNA15-202ENST00000516881 127 ntBASIC0.33□□□□□ -2.36
COL21A1Q96P44 AC022559.1-201ENST00000520905 205 ntBASIC0.33□□□□□ -2.36
COL21A1Q96P44 AP003327.1-201ENST00000529684 127 ntBASIC0.33□□□□□ -2.36
COL21A1Q96P44 MIR4802-201ENST00000581881 80 ntBASIC0.33□□□□□ -2.36
COL21A1Q96P44 MIR4676-201ENST00000583078 72 ntBASIC0.33□□□□□ -2.36
COL21A1Q96P44 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.33□□□□□ -2.36
COL21A1Q96P44 MIR30D-201ENST00000362283 70 ntBASIC0.32□□□□□ -2.36
COL21A1Q96P44 RNU6-1020P-201ENST00000363684 107 ntBASIC0.32□□□□□ -2.36
COL21A1Q96P44 MIR140-201ENST00000385282 100 ntBASIC0.32□□□□□ -2.36
COL21A1Q96P44 RNU6-1319P-201ENST00000390855 104 ntBASIC0.32□□□□□ -2.36
COL21A1Q96P44 RNU6-747P-201ENST00000390928 104 ntBASIC0.32□□□□□ -2.36
COL21A1Q96P44 RNU6-241P-201ENST00000391148 104 ntBASIC0.32□□□□□ -2.36
COL21A1Q96P44 MIR18B-201ENST00000454574 71 ntBASIC0.32□□□□□ -2.36
COL21A1Q96P44 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.32□□□□□ -2.36
COL21A1Q96P44 RNU7-56P-201ENST00000458744 62 ntBASIC0.32□□□□□ -2.36
COL21A1Q96P44 snoU13.19-201ENST00000459148 104 ntBASIC0.32□□□□□ -2.36
COL21A1Q96P44 RNU6-1219P-201ENST00000516143 112 ntBASIC0.32□□□□□ -2.36
COL21A1Q96P44 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.32□□□□□ -2.36
COL21A1Q96P44 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.32□□□□□ -2.36
COL21A1Q96P44 MTND5P32-201ENST00000560711 1802 ntBASIC0.31□□□□□ -2.36
COL21A1Q96P44 SNORA25.7-201ENST00000364375 127 ntBASIC0.31□□□□□ -2.36
COL21A1Q96P44 RNU4-16P-201ENST00000364737 141 ntBASIC0.31□□□□□ -2.36
COL21A1Q96P44 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
COL21A1Q96P44 SNORA36.2-201ENST00000384004 127 ntBASIC0.31□□□□□ -2.36
COL21A1Q96P44 Y_RNA.430-201ENST00000384081 110 ntBASIC0.31□□□□□ -2.36
COL21A1Q96P44 Y_RNA.489-201ENST00000384410 101 ntBASIC0.31□□□□□ -2.36
COL21A1Q96P44 Y_RNA.521-201ENST00000384560 114 ntBASIC0.31□□□□□ -2.36
COL21A1Q96P44 RNU6-768P-201ENST00000384683 107 ntBASIC0.31□□□□□ -2.36
COL21A1Q96P44 MIR573-201ENST00000384964 99 ntBASIC0.31□□□□□ -2.36
COL21A1Q96P44 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.31□□□□□ -2.36
COL21A1Q96P44 RNA5SP261-201ENST00000410536 106 ntBASIC0.31□□□□□ -2.36
COL21A1Q96P44 RNU7-185P-201ENST00000459215 60 ntBASIC0.31□□□□□ -2.36
COL21A1Q96P44 RNU7-70P-201ENST00000516941 66 ntBASIC0.31□□□□□ -2.36
COL21A1Q96P44 MIR4431-201ENST00000579990 94 ntBASIC0.31□□□□□ -2.36
COL21A1Q96P44 AC008608.1-201ENST00000603910 127 ntBASIC0.31□□□□□ -2.36
COL21A1Q96P44 AC078938.1-201ENST00000620993 318 ntBASIC0.31□□□□□ -2.36
COL21A1Q96P44 AC021613.1-201ENST00000623880 111 ntBASIC0.31□□□□□ -2.36
COL21A1Q96P44 MIR6841-201ENST00000637129 72 ntBASIC0.31□□□□□ -2.36
COL21A1Q96P44 SNORA22.1-201ENST00000362701 134 ntBASIC0.3□□□□□ -2.36
COL21A1Q96P44 Y_RNA.52-201ENST00000362760 96 ntBASIC0.3□□□□□ -2.36
COL21A1Q96P44 RNU6-379P-201ENST00000363813 104 ntBASIC0.3□□□□□ -2.36
COL21A1Q96P44 Y_RNA.188-201ENST00000363952 111 ntBASIC0.3□□□□□ -2.36
COL21A1Q96P44 Y_RNA.233-201ENST00000364407 101 ntBASIC0.3□□□□□ -2.36
COL21A1Q96P44 RNU6-1082P-201ENST00000364574 107 ntBASIC0.3□□□□□ -2.36
COL21A1Q96P44 Y_RNA.297-201ENST00000364950 91 ntBASIC0.3□□□□□ -2.36
COL21A1Q96P44 RNY4P3-201ENST00000365254 95 ntBASIC0.3□□□□□ -2.36
COL21A1Q96P44 MIR125B2-201ENST00000385128 89 ntBASIC0.3□□□□□ -2.36
COL21A1Q96P44 MIR938-201ENST00000401216 83 ntBASIC0.3□□□□□ -2.36
COL21A1Q96P44 MIR1257-201ENST00000408490 117 ntBASIC0.3□□□□□ -2.36
COL21A1Q96P44 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.3□□□□□ -2.36
COL21A1Q96P44 SNORA68.3-201ENST00000515906 83 ntBASIC0.3□□□□□ -2.36
COL21A1Q96P44 RNU6-1271P-201ENST00000517049 105 ntBASIC0.3□□□□□ -2.36
COL21A1Q96P44 MIR3152-201ENST00000579801 74 ntBASIC0.3□□□□□ -2.36
COL21A1Q96P44 AL662814.1-201ENST00000617364 121 ntBASIC0.3□□□□□ -2.36
COL21A1Q96P44 RNU6-30P-201ENST00000384561 107 ntBASIC0.29□□□□□ -2.36
COL21A1Q96P44 SNORA20-201ENST00000384662 132 ntBASIC0.29□□□□□ -2.36
COL21A1Q96P44 MT-TF-201ENST00000387314 71 ntBASIC0.29□□□□□ -2.36
COL21A1Q96P44 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.29□□□□□ -2.36
COL21A1Q96P44 RNU7-102P-201ENST00000458948 62 ntBASIC0.29□□□□□ -2.36
COL21A1Q96P44 Y_RNA.644-201ENST00000459006 113 ntBASIC0.29□□□□□ -2.36
COL21A1Q96P44 Y_RNA.674-201ENST00000516362 113 ntBASIC0.29□□□□□ -2.36
COL21A1Q96P44 RNU6-1258P-201ENST00000516911 111 ntBASIC0.29□□□□□ -2.36
COL21A1Q96P44 RNU6-388P-201ENST00000517012 105 ntBASIC0.29□□□□□ -2.36
COL21A1Q96P44 RNU6-389P-201ENST00000517048 105 ntBASIC0.29□□□□□ -2.36
COL21A1Q96P44 RNU7-156P-201ENST00000517214 74 ntBASIC0.29□□□□□ -2.36
COL21A1Q96P44 MIR3612-201ENST00000579753 87 ntBASIC0.29□□□□□ -2.36
COL21A1Q96P44 AC141273.2-201ENST00000618989 130 ntBASIC0.29□□□□□ -2.36
COL21A1Q96P44 MIR18A-201ENST00000362310 71 ntBASIC0.28□□□□□ -2.36
COL21A1Q96P44 Y_RNA.171-201ENST00000363760 102 ntBASIC0.28□□□□□ -2.36
COL21A1Q96P44 RNU6-312P-201ENST00000364629 107 ntBASIC0.28□□□□□ -2.36
COL21A1Q96P44 SNORA2A-201ENST00000383885 135 ntBASIC0.28□□□□□ -2.36
COL21A1Q96P44 Y_RNA.401-201ENST00000383965 117 ntBASIC0.28□□□□□ -2.36
COL21A1Q96P44 RNU6-364P-201ENST00000384387 107 ntBASIC0.28□□□□□ -2.36
COL21A1Q96P44 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.28□□□□□ -2.36
COL21A1Q96P44 RNA5SP237-201ENST00000410414 113 ntBASIC0.28□□□□□ -2.36
COL21A1Q96P44 RNU5E-9P-201ENST00000411164 104 ntBASIC0.28□□□□□ -2.36
COL21A1Q96P44 AC107027.2-201ENST00000512197 115 ntBASIC0.28□□□□□ -2.36
COL21A1Q96P44 RNA5SP236-201ENST00000516169 116 ntBASIC0.28□□□□□ -2.36
COL21A1Q96P44 AC141846.1-201ENST00000568348 142 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 208.9 ms