Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 RNU6-1053P-201ENST00000515930 101 ntBASIC1.86□□□□□ -2.11
ZSWIM3Q96MP5 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.86□□□□□ -2.11
ZSWIM3Q96MP5 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.86□□□□□ -2.11
ZSWIM3Q96MP5 AC012531.4-201ENST00000616509 177 ntBASIC1.86□□□□□ -2.11
ZSWIM3Q96MP5 MIR378A-201ENST00000362177 66 ntBASIC1.85□□□□□ -2.11
ZSWIM3Q96MP5 RNY1P7-201ENST00000384743 110 ntBASIC1.85□□□□□ -2.11
ZSWIM3Q96MP5 MIR206-201ENST00000384872 86 ntBASIC1.85□□□□□ -2.11
ZSWIM3Q96MP5 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.85□□□□□ -2.11
ZSWIM3Q96MP5 RNU7-2P-201ENST00000516096 62 ntBASIC1.85□□□□□ -2.11
ZSWIM3Q96MP5 RNU6-1006P-201ENST00000516998 103 ntBASIC1.85□□□□□ -2.11
ZSWIM3Q96MP5 RNU6-762P-201ENST00000517107 102 ntBASIC1.85□□□□□ -2.11
ZSWIM3Q96MP5 MIR4303-201ENST00000581299 66 ntBASIC1.85□□□□□ -2.11
ZSWIM3Q96MP5 AC091304.10-201ENST00000641554 121 ntBASIC1.85□□□□□ -2.11
ZSWIM3Q96MP5 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
ZSWIM3Q96MP5 SNORD45B-201ENST00000364617 72 ntBASIC1.84□□□□□ -2.11
ZSWIM3Q96MP5 RNA5SP259-201ENST00000365541 109 ntBASIC1.84□□□□□ -2.11
ZSWIM3Q96MP5 RNU6-1307P-201ENST00000391012 103 ntBASIC1.84□□□□□ -2.11
ZSWIM3Q96MP5 RNA5SP247-201ENST00000411181 105 ntBASIC1.84□□□□□ -2.11
ZSWIM3Q96MP5 AC009474.2-201ENST00000451383 136 ntBASIC1.84□□□□□ -2.11
ZSWIM3Q96MP5 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.84□□□□□ -2.11
ZSWIM3Q96MP5 MIR4777-201ENST00000583710 86 ntBASIC1.84□□□□□ -2.11
ZSWIM3Q96MP5 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
ZSWIM3Q96MP5 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
ZSWIM3Q96MP5 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
ZSWIM3Q96MP5 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
ZSWIM3Q96MP5 Y_RNA.95-201ENST00000363079 95 ntBASIC1.83□□□□□ -2.12
ZSWIM3Q96MP5 Y_RNA.290-201ENST00000364879 114 ntBASIC1.83□□□□□ -2.12
ZSWIM3Q96MP5 MIR1302-7-201ENST00000408841 72 ntBASIC1.83□□□□□ -2.12
ZSWIM3Q96MP5 RNU7-61P-201ENST00000515897 61 ntBASIC1.83□□□□□ -2.12
ZSWIM3Q96MP5 RNU6-795P-201ENST00000516323 103 ntBASIC1.83□□□□□ -2.12
ZSWIM3Q96MP5 MIR4439-201ENST00000583746 80 ntBASIC1.83□□□□□ -2.12
ZSWIM3Q96MP5 AL357312.1-201ENST00000603879 298 ntBASIC1.83□□□□□ -2.12
ZSWIM3Q96MP5 snoU13.31-201ENST00000607291 104 ntBASIC1.83□□□□□ -2.12
ZSWIM3Q96MP5 AL096861.1-201ENST00000610899 123 ntBASIC1.83□□□□□ -2.12
ZSWIM3Q96MP5 SNORA16.1-201ENST00000364597 132 ntBASIC1.82□□□□□ -2.12
ZSWIM3Q96MP5 RNY4P29-201ENST00000410801 97 ntBASIC1.82□□□□□ -2.12
ZSWIM3Q96MP5 AP1B1P2-201ENST00000416196 106 ntBASIC1.82□□□□□ -2.12
ZSWIM3Q96MP5 RNU7-137P-201ENST00000516788 62 ntBASIC1.82□□□□□ -2.12
ZSWIM3Q96MP5 MIR3192-201ENST00000584920 77 ntBASIC1.82□□□□□ -2.12
ZSWIM3Q96MP5 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
ZSWIM3Q96MP5 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
ZSWIM3Q96MP5 MIR302D-201ENST00000362275 68 ntBASIC1.81□□□□□ -2.12
ZSWIM3Q96MP5 Y_RNA.96-201ENST00000363092 109 ntBASIC1.81□□□□□ -2.12
ZSWIM3Q96MP5 SNORD114-10-201ENST00000363409 72 ntBASIC1.81□□□□□ -2.12
ZSWIM3Q96MP5 RNU6-60P-201ENST00000364792 103 ntBASIC1.81□□□□□ -2.12
ZSWIM3Q96MP5 SNORD38B-201ENST00000384690 67 ntBASIC1.81□□□□□ -2.12
ZSWIM3Q96MP5 RNA5SP489-201ENST00000410986 109 ntBASIC1.81□□□□□ -2.12
ZSWIM3Q96MP5 UBL5P1-201ENST00000507979 193 ntBASIC1.81□□□□□ -2.12
ZSWIM3Q96MP5 RNU7-79P-201ENST00000516082 62 ntBASIC1.81□□□□□ -2.12
ZSWIM3Q96MP5 SNORD67.1-201ENST00000516618 108 ntBASIC1.81□□□□□ -2.12
ZSWIM3Q96MP5 RNU6-922P-201ENST00000516753 99 ntBASIC1.81□□□□□ -2.12
ZSWIM3Q96MP5 MIR548Z-201ENST00000584743 97 ntBASIC1.81□□□□□ -2.12
ZSWIM3Q96MP5 MIR4781-201ENST00000585250 76 ntBASIC1.81□□□□□ -2.12
ZSWIM3Q96MP5 AC103810.8-201ENST00000607347 118 ntBASIC1.81□□□□□ -2.12
ZSWIM3Q96MP5 SNORD38B-202ENST00000625943 69 ntBASIC1.81□□□□□ -2.12
ZSWIM3Q96MP5 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
ZSWIM3Q96MP5 RNU6-644P-201ENST00000391155 98 ntBASIC1.8□□□□□ -2.12
ZSWIM3Q96MP5 RNU6-447P-201ENST00000410293 104 ntBASIC1.8□□□□□ -2.12
ZSWIM3Q96MP5 RNU6-1118P-201ENST00000410382 104 ntBASIC1.8□□□□□ -2.12
ZSWIM3Q96MP5 RNU6-1076P-201ENST00000410397 104 ntBASIC1.8□□□□□ -2.12
ZSWIM3Q96MP5 RNU6-355P-201ENST00000410427 104 ntBASIC1.8□□□□□ -2.12
ZSWIM3Q96MP5 RNU6-791P-201ENST00000410467 104 ntBASIC1.8□□□□□ -2.12
ZSWIM3Q96MP5 RNU6-705P-201ENST00000410601 104 ntBASIC1.8□□□□□ -2.12
ZSWIM3Q96MP5 RNU6-1100P-201ENST00000410691 104 ntBASIC1.8□□□□□ -2.12
ZSWIM3Q96MP5 RNU6-860P-201ENST00000410860 104 ntBASIC1.8□□□□□ -2.12
ZSWIM3Q96MP5 RNU6-1217P-201ENST00000411276 104 ntBASIC1.8□□□□□ -2.12
ZSWIM3Q96MP5 RNU6-785P-201ENST00000411324 104 ntBASIC1.8□□□□□ -2.12
ZSWIM3Q96MP5 MRPL35P3-201ENST00000421557 364 ntBASIC1.8□□□□□ -2.12
ZSWIM3Q96MP5 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.8□□□□□ -2.12
ZSWIM3Q96MP5 GHRLOS.1-201ENST00000610995 70 ntBASIC1.8□□□□□ -2.12
ZSWIM3Q96MP5 U6.90-201ENST00000614007 104 ntBASIC1.8□□□□□ -2.12
ZSWIM3Q96MP5 MIR8074-201ENST00000615081 81 ntBASIC1.8□□□□□ -2.12
ZSWIM3Q96MP5 U7.3-201ENST00000616123 62 ntBASIC1.8□□□□□ -2.12
ZSWIM3Q96MP5 U6.70-201ENST00000620287 104 ntBASIC1.8□□□□□ -2.12
ZSWIM3Q96MP5 RNY1P13-201ENST00000365030 105 ntBASIC1.79□□□□□ -2.12
ZSWIM3Q96MP5 SNORA26.2-201ENST00000390922 122 ntBASIC1.79□□□□□ -2.12
ZSWIM3Q96MP5 HSPE1P24-201ENST00000450782 238 ntBASIC1.79□□□□□ -2.12
ZSWIM3Q96MP5 snoU13.25-201ENST00000458945 104 ntBASIC1.79□□□□□ -2.12
ZSWIM3Q96MP5 AC026421.1-201ENST00000519101 163 ntBASIC1.79□□□□□ -2.12
ZSWIM3Q96MP5 AP003716.2-201ENST00000528260 108 ntBASIC1.79□□□□□ -2.12
ZSWIM3Q96MP5 MIR3122-201ENST00000577243 73 ntBASIC1.79□□□□□ -2.12
ZSWIM3Q96MP5 MIR4419B-201ENST00000577260 68 ntBASIC1.79□□□□□ -2.12
ZSWIM3Q96MP5 MIR4255-201ENST00000579351 72 ntBASIC1.79□□□□□ -2.12
ZSWIM3Q96MP5 AC096720.1-201ENST00000604441 183 ntBASIC1.79□□□□□ -2.12
ZSWIM3Q96MP5 AL512310.12-203ENST00000640543 90 ntBASIC1.79□□□□□ -2.12
ZSWIM3Q96MP5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.79□□□□□ -2.12
ZSWIM3Q96MP5 SNORD38.1-201ENST00000363863 68 ntBASIC1.78□□□□□ -2.12
ZSWIM3Q96MP5 Y_RNA.247-201ENST00000364500 92 ntBASIC1.78□□□□□ -2.12
ZSWIM3Q96MP5 Y_RNA.388-201ENST00000383919 113 ntBASIC1.78□□□□□ -2.12
ZSWIM3Q96MP5 MIR563-201ENST00000385080 79 ntBASIC1.78□□□□□ -2.12
ZSWIM3Q96MP5 RPL31P63-201ENST00000422565 375 ntBASIC1.78□□□□□ -2.12
ZSWIM3Q96MP5 AC244023.1-201ENST00000426884 112 ntBASIC1.78□□□□□ -2.12
ZSWIM3Q96MP5 Y_RNA.659-201ENST00000515994 113 ntBASIC1.78□□□□□ -2.12
ZSWIM3Q96MP5 Y_RNA.705-201ENST00000516862 110 ntBASIC1.78□□□□□ -2.12
ZSWIM3Q96MP5 AC242498.1-201ENST00000604134 111 ntBASIC1.78□□□□□ -2.12
ZSWIM3Q96MP5 AC062037.1-201ENST00000605302 128 ntBASIC1.78□□□□□ -2.12
ZSWIM3Q96MP5 MIR502-201ENST00000606349 86 ntBASIC1.78□□□□□ -2.12
ZSWIM3Q96MP5 AL662814.1-201ENST00000617364 121 ntBASIC1.78□□□□□ -2.12
ZSWIM3Q96MP5 WWP1P1-201ENST00000466609 2769 ntBASIC1.78□□□□□ -2.12
ZSWIM3Q96MP5 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 277.6 ms