Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 U8.15-201ENST00000390947 134 ntBASIC0.29□□□□□ -2.36
RPGRIP1Q96KN7 RNU6-578P-201ENST00000390980 103 ntBASIC0.29□□□□□ -2.36
RPGRIP1Q96KN7 RNU6-493P-201ENST00000391321 108 ntBASIC0.29□□□□□ -2.36
RPGRIP1Q96KN7 Y_RNA.617-201ENST00000410920 90 ntBASIC0.29□□□□□ -2.36
RPGRIP1Q96KN7 SNORD71-201ENST00000411292 86 ntBASIC0.29□□□□□ -2.36
RPGRIP1Q96KN7 RNU7-70P-201ENST00000516941 66 ntBASIC0.29□□□□□ -2.36
RPGRIP1Q96KN7 AC133485.4-201ENST00000561835 220 ntBASIC0.29□□□□□ -2.36
RPGRIP1Q96KN7 AC141846.1-201ENST00000568348 142 ntBASIC0.29□□□□□ -2.36
RPGRIP1Q96KN7 MIR4636-201ENST00000582271 80 ntBASIC0.29□□□□□ -2.36
RPGRIP1Q96KN7 RNU2-4P-201ENST00000606190 192 ntBASIC0.29□□□□□ -2.36
RPGRIP1Q96KN7 SNORA25.18-201ENST00000607153 114 ntBASIC0.29□□□□□ -2.36
RPGRIP1Q96KN7 uc_338.16-201ENST00000621804 95 ntBASIC0.29□□□□□ -2.36
RPGRIP1Q96KN7 Y_RNA.13-201ENST00000362403 112 ntBASIC0.28□□□□□ -2.36
RPGRIP1Q96KN7 SNORA22.1-201ENST00000362701 134 ntBASIC0.28□□□□□ -2.36
RPGRIP1Q96KN7 SNORD44.1-201ENST00000363202 61 ntBASIC0.28□□□□□ -2.36
RPGRIP1Q96KN7 MIR548H3-201ENST00000408771 118 ntBASIC0.28□□□□□ -2.36
RPGRIP1Q96KN7 SCARNA15-202ENST00000516881 127 ntBASIC0.28□□□□□ -2.36
RPGRIP1Q96KN7 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.28□□□□□ -2.36
RPGRIP1Q96KN7 RNU6-403P-201ENST00000363163 104 ntBASIC0.27□□□□□ -2.37
RPGRIP1Q96KN7 Y_RNA.149-201ENST00000363558 117 ntBASIC0.27□□□□□ -2.37
RPGRIP1Q96KN7 RNY4P28-201ENST00000365281 93 ntBASIC0.27□□□□□ -2.37
RPGRIP1Q96KN7 SNORA8.2-201ENST00000384372 139 ntBASIC0.27□□□□□ -2.37
RPGRIP1Q96KN7 RNU6-738P-201ENST00000384531 106 ntBASIC0.27□□□□□ -2.37
RPGRIP1Q96KN7 Y_RNA.567-201ENST00000384736 106 ntBASIC0.27□□□□□ -2.37
RPGRIP1Q96KN7 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.27□□□□□ -2.37
RPGRIP1Q96KN7 AC022523.2-201ENST00000561045 150 ntBASIC0.27□□□□□ -2.37
RPGRIP1Q96KN7 Y_RNA.60-201ENST00000362831 98 ntBASIC0.26□□□□□ -2.37
RPGRIP1Q96KN7 SNORD118-201ENST00000363593 134 ntBASIC0.26□□□□□ -2.37
RPGRIP1Q96KN7 Y_RNA.288-201ENST00000364854 92 ntBASIC0.26□□□□□ -2.37
RPGRIP1Q96KN7 Y_RNA.459-201ENST00000384251 102 ntBASIC0.26□□□□□ -2.37
RPGRIP1Q96KN7 Y_RNA.588-201ENST00000391254 102 ntBASIC0.26□□□□□ -2.37
RPGRIP1Q96KN7 AC096949.1-201ENST00000412047 152 ntBASIC0.26□□□□□ -2.37
RPGRIP1Q96KN7 SNRPGP12-201ENST00000449481 213 ntBASIC0.26□□□□□ -2.37
RPGRIP1Q96KN7 Y_RNA.797-201ENST00000515977 94 ntBASIC0.26□□□□□ -2.37
RPGRIP1Q96KN7 RNU6-1149P-201ENST00000516810 97 ntBASIC0.26□□□□□ -2.37
RPGRIP1Q96KN7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
RPGRIP1Q96KN7 SNORD27-201ENST00000363981 72 ntBASIC0.25□□□□□ -2.37
RPGRIP1Q96KN7 RNU4-16P-201ENST00000364737 141 ntBASIC0.25□□□□□ -2.37
RPGRIP1Q96KN7 RNU6-1327P-201ENST00000365302 105 ntBASIC0.25□□□□□ -2.37
RPGRIP1Q96KN7 SNORA18-201ENST00000384416 132 ntBASIC0.25□□□□□ -2.37
RPGRIP1Q96KN7 Y_RNA.562-201ENST00000384695 113 ntBASIC0.25□□□□□ -2.37
RPGRIP1Q96KN7 MIR624-201ENST00000385217 97 ntBASIC0.25□□□□□ -2.37
RPGRIP1Q96KN7 MIR644A-201ENST00000385262 94 ntBASIC0.25□□□□□ -2.37
RPGRIP1Q96KN7 RNA5SP299-201ENST00000391203 116 ntBASIC0.25□□□□□ -2.37
RPGRIP1Q96KN7 MIR1265-201ENST00000408444 86 ntBASIC0.25□□□□□ -2.37
RPGRIP1Q96KN7 AC108740.1-201ENST00000498629 225 ntBASIC0.25□□□□□ -2.37
RPGRIP1Q96KN7 MIR4491-201ENST00000581087 68 ntBASIC0.25□□□□□ -2.37
RPGRIP1Q96KN7 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
RPGRIP1Q96KN7 MIR6082-201ENST00000613604 109 ntBASIC0.25□□□□□ -2.37
RPGRIP1Q96KN7 Y_RNA.121-201ENST00000363309 113 ntBASIC0.24□□□□□ -2.37
RPGRIP1Q96KN7 SNORA36.1-201ENST00000363424 132 ntBASIC0.24□□□□□ -2.37
RPGRIP1Q96KN7 RNU6-923P-201ENST00000364753 107 ntBASIC0.24□□□□□ -2.37
RPGRIP1Q96KN7 RNU6-643P-201ENST00000384018 107 ntBASIC0.24□□□□□ -2.37
RPGRIP1Q96KN7 RNU6-949P-201ENST00000384040 107 ntBASIC0.24□□□□□ -2.37
RPGRIP1Q96KN7 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.24□□□□□ -2.37
RPGRIP1Q96KN7 MTND2P23-201ENST00000422990 651 ntBASIC0.24□□□□□ -2.37
RPGRIP1Q96KN7 RNU6-893P-201ENST00000458841 100 ntBASIC0.24□□□□□ -2.37
RPGRIP1Q96KN7 MTND1P19-201ENST00000511780 315 ntBASIC0.24□□□□□ -2.37
RPGRIP1Q96KN7 RNU6-469P-201ENST00000516253 101 ntBASIC0.24□□□□□ -2.37
RPGRIP1Q96KN7 MIR5190-201ENST00000581537 80 ntBASIC0.24□□□□□ -2.37
RPGRIP1Q96KN7 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.24□□□□□ -2.37
RPGRIP1Q96KN7 Y_RNA.515-201ENST00000384535 112 ntBASIC0.23□□□□□ -2.37
RPGRIP1Q96KN7 RNU6-1011P-201ENST00000384668 107 ntBASIC0.23□□□□□ -2.37
RPGRIP1Q96KN7 Y_RNA.556-201ENST00000384677 113 ntBASIC0.23□□□□□ -2.37
RPGRIP1Q96KN7 MIR4308-201ENST00000580634 81 ntBASIC0.23□□□□□ -2.37
RPGRIP1Q96KN7 MIR4802-201ENST00000581881 80 ntBASIC0.23□□□□□ -2.37
RPGRIP1Q96KN7 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.23□□□□□ -2.37
RPGRIP1Q96KN7 Y_RNA.32-201ENST00000362589 110 ntBASIC0.22□□□□□ -2.37
RPGRIP1Q96KN7 Y_RNA.65-201ENST00000362846 100 ntBASIC0.22□□□□□ -2.37
RPGRIP1Q96KN7 Y_RNA.182-201ENST00000363880 111 ntBASIC0.22□□□□□ -2.37
RPGRIP1Q96KN7 Y_RNA.476-201ENST00000384347 108 ntBASIC0.22□□□□□ -2.37
RPGRIP1Q96KN7 SNORA72.6-201ENST00000384520 129 ntBASIC0.22□□□□□ -2.37
RPGRIP1Q96KN7 Y_RNA.539-201ENST00000384635 107 ntBASIC0.22□□□□□ -2.37
RPGRIP1Q96KN7 Y_RNA.571-201ENST00000384753 98 ntBASIC0.22□□□□□ -2.37
RPGRIP1Q96KN7 AL512326.2-201ENST00000426359 151 ntBASIC0.22□□□□□ -2.37
RPGRIP1Q96KN7 RNU6-1258P-201ENST00000516911 111 ntBASIC0.22□□□□□ -2.37
RPGRIP1Q96KN7 RNU6-765P-201ENST00000516916 99 ntBASIC0.22□□□□□ -2.37
RPGRIP1Q96KN7 Y_RNA.757-201ENST00000578934 114 ntBASIC0.22□□□□□ -2.37
RPGRIP1Q96KN7 AC078938.1-201ENST00000620993 318 ntBASIC0.22□□□□□ -2.37
RPGRIP1Q96KN7 RNY1P13-201ENST00000365030 105 ntBASIC0.21□□□□□ -2.38
RPGRIP1Q96KN7 Y_RNA.477-201ENST00000384352 108 ntBASIC0.21□□□□□ -2.38
RPGRIP1Q96KN7 MIR1302-3-201ENST00000408128 138 ntBASIC0.21□□□□□ -2.38
RPGRIP1Q96KN7 MIR1912-201ENST00000410389 80 ntBASIC0.21□□□□□ -2.38
RPGRIP1Q96KN7 Y_RNA.626-201ENST00000411288 95 ntBASIC0.21□□□□□ -2.38
RPGRIP1Q96KN7 SNORA31.14-201ENST00000516728 116 ntBASIC0.21□□□□□ -2.38
RPGRIP1Q96KN7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
RPGRIP1Q96KN7 MIR5589-201ENST00000579442 60 ntBASIC0.21□□□□□ -2.38
RPGRIP1Q96KN7 MIR4305-201ENST00000583252 102 ntBASIC0.21□□□□□ -2.38
RPGRIP1Q96KN7 MTND5P32-201ENST00000560711 1802 ntBASIC0.21□□□□□ -2.38
RPGRIP1Q96KN7 SNORA25.7-201ENST00000364375 127 ntBASIC0.2□□□□□ -2.38
RPGRIP1Q96KN7 RNU4-70P-201ENST00000384579 139 ntBASIC0.2□□□□□ -2.38
RPGRIP1Q96KN7 SNORD58.1-201ENST00000391313 66 ntBASIC0.2□□□□□ -2.38
RPGRIP1Q96KN7 RNU5E-9P-201ENST00000411164 104 ntBASIC0.2□□□□□ -2.38
RPGRIP1Q96KN7 MTCYBP9-201ENST00000431021 303 ntBASIC0.2□□□□□ -2.38
RPGRIP1Q96KN7 MRPS18CP4-201ENST00000535821 231 ntBASIC0.2□□□□□ -2.38
RPGRIP1Q96KN7 Y_RNA.20-201ENST00000362479 113 ntBASIC0.19□□□□□ -2.38
RPGRIP1Q96KN7 Y_RNA.171-201ENST00000363760 102 ntBASIC0.19□□□□□ -2.38
RPGRIP1Q96KN7 RNU6-275P-201ENST00000364910 107 ntBASIC0.19□□□□□ -2.38
RPGRIP1Q96KN7 RNU6-1336P-201ENST00000383886 109 ntBASIC0.19□□□□□ -2.38
RPGRIP1Q96KN7 RNY1P6-201ENST00000384193 109 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 213.5 ms