Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 ELOCP20-201ENST00000422460 345 ntBASIC-0.34□□□□□ -2.46
USP47Q96K76 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.34□□□□□ -2.46
USP47Q96K76 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-0.34□□□□□ -2.46
USP47Q96K76 RNY3P15-201ENST00000516297 97 ntBASIC-0.34□□□□□ -2.46
USP47Q96K76 RNU6-531P-201ENST00000516694 104 ntBASIC-0.34□□□□□ -2.46
USP47Q96K76 RNU7-70P-201ENST00000516941 66 ntBASIC-0.34□□□□□ -2.46
USP47Q96K76 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.34□□□□□ -2.46
USP47Q96K76 MIR6841-201ENST00000637129 72 ntBASIC-0.34□□□□□ -2.46
USP47Q96K76 UBE2WP1-201ENST00000362030 340 ntBASIC-0.35□□□□□ -2.47
USP47Q96K76 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.35□□□□□ -2.47
USP47Q96K76 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.35□□□□□ -2.47
USP47Q96K76 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.35□□□□□ -2.47
USP47Q96K76 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.35□□□□□ -2.47
USP47Q96K76 RNU6-1009P-201ENST00000390996 107 ntBASIC-0.35□□□□□ -2.47
USP47Q96K76 RNU6-453P-201ENST00000516819 85 ntBASIC-0.35□□□□□ -2.47
USP47Q96K76 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.36□□□□□ -2.47
USP47Q96K76 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.36□□□□□ -2.47
USP47Q96K76 SNORA63.5-201ENST00000363548 123 ntBASIC-0.36□□□□□ -2.47
USP47Q96K76 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.36□□□□□ -2.47
USP47Q96K76 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.36□□□□□ -2.47
USP47Q96K76 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
USP47Q96K76 RPL21P38-201ENST00000418090 167 ntBASIC-0.36□□□□□ -2.47
USP47Q96K76 RNU7-165P-201ENST00000458864 60 ntBASIC-0.36□□□□□ -2.47
USP47Q96K76 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.36□□□□□ -2.47
USP47Q96K76 MIR369-201ENST00000362155 70 ntBASIC-0.37□□□□□ -2.47
USP47Q96K76 SNORD115-24-201ENST00000363528 82 ntBASIC-0.37□□□□□ -2.47
USP47Q96K76 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.37□□□□□ -2.47
USP47Q96K76 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.37□□□□□ -2.47
USP47Q96K76 RNU6-269P-201ENST00000391077 97 ntBASIC-0.37□□□□□ -2.47
USP47Q96K76 MIR548L-201ENST00000408303 86 ntBASIC-0.37□□□□□ -2.47
USP47Q96K76 RNA5SP163-201ENST00000410304 99 ntBASIC-0.37□□□□□ -2.47
USP47Q96K76 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.37□□□□□ -2.47
USP47Q96K76 RNU7-79P-201ENST00000516082 62 ntBASIC-0.37□□□□□ -2.47
USP47Q96K76 Y_RNA.721-201ENST00000517207 102 ntBASIC-0.37□□□□□ -2.47
USP47Q96K76 AP003072.1-201ENST00000531740 145 ntBASIC-0.37□□□□□ -2.47
USP47Q96K76 MIR548AX-201ENST00000580117 73 ntBASIC-0.37□□□□□ -2.47
USP47Q96K76 MTND5P32-201ENST00000560711 1802 ntBASIC-0.38□□□□□ -2.47
USP47Q96K76 RNU4-58P-201ENST00000363192 141 ntBASIC-0.38□□□□□ -2.47
USP47Q96K76 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.38□□□□□ -2.47
USP47Q96K76 RNU6-726P-201ENST00000364680 107 ntBASIC-0.38□□□□□ -2.47
USP47Q96K76 RNU6-806P-201ENST00000365147 105 ntBASIC-0.38□□□□□ -2.47
USP47Q96K76 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.38□□□□□ -2.47
USP47Q96K76 MTND4LP11-201ENST00000422184 280 ntBASIC-0.38□□□□□ -2.47
USP47Q96K76 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.38□□□□□ -2.47
USP47Q96K76 MIR5706-201ENST00000579841 80 ntBASIC-0.38□□□□□ -2.47
USP47Q96K76 MIR4795-201ENST00000584182 89 ntBASIC-0.38□□□□□ -2.47
USP47Q96K76 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.39□□□□□ -2.47
USP47Q96K76 MIR224-201ENST00000384889 81 ntBASIC-0.39□□□□□ -2.47
USP47Q96K76 MIR616-201ENST00000385293 97 ntBASIC-0.39□□□□□ -2.47
USP47Q96K76 MIR501-201ENST00000390204 84 ntBASIC-0.39□□□□□ -2.47
USP47Q96K76 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.39□□□□□ -2.47
USP47Q96K76 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.39□□□□□ -2.47
USP47Q96K76 MIR101-2-201ENST00000362195 79 ntBASIC-0.4□□□□□ -2.47
USP47Q96K76 RNA5SP133-201ENST00000363368 119 ntBASIC-0.4□□□□□ -2.47
USP47Q96K76 RNU6-893P-201ENST00000458841 100 ntBASIC-0.4□□□□□ -2.47
USP47Q96K76 SERF1AP1-201ENST00000514575 187 ntBASIC-0.4□□□□□ -2.47
USP47Q96K76 RNU6-561P-201ENST00000516222 102 ntBASIC-0.4□□□□□ -2.47
USP47Q96K76 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.4□□□□□ -2.47
USP47Q96K76 SNORA70.25-201ENST00000612741 95 ntBASIC-0.4□□□□□ -2.47
USP47Q96K76 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.41□□□□□ -2.47
USP47Q96K76 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.41□□□□□ -2.47
USP47Q96K76 SNORD114-12-201ENST00000365400 75 ntBASIC-0.41□□□□□ -2.47
USP47Q96K76 MTND3P22-201ENST00000510932 243 ntBASIC-0.41□□□□□ -2.47
USP47Q96K76 RNU6-320P-201ENST00000516511 106 ntBASIC-0.41□□□□□ -2.47
USP47Q96K76 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.41□□□□□ -2.47
USP47Q96K76 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.41□□□□□ -2.47
USP47Q96K76 MIR548AD-201ENST00000584780 82 ntBASIC-0.41□□□□□ -2.47
USP47Q96K76 MIR8064-201ENST00000612863 90 ntBASIC-0.41□□□□□ -2.47
USP47Q96K76 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.42□□□□□ -2.48
USP47Q96K76 RNU6-161P-201ENST00000363051 106 ntBASIC-0.42□□□□□ -2.48
USP47Q96K76 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.42□□□□□ -2.48
USP47Q96K76 RNU4-16P-201ENST00000364737 141 ntBASIC-0.42□□□□□ -2.48
USP47Q96K76 SNORA22B-201ENST00000383876 138 ntBASIC-0.42□□□□□ -2.48
USP47Q96K76 SNORA79-201ENST00000408376 140 ntBASIC-0.42□□□□□ -2.48
USP47Q96K76 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.42□□□□□ -2.48
USP47Q96K76 U7.6-201ENST00000610841 64 ntBASIC-0.42□□□□□ -2.48
USP47Q96K76 AL162376.1-201ENST00000624117 175 ntBASIC-0.42□□□□□ -2.48
USP47Q96K76 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.43□□□□□ -2.48
USP47Q96K76 RNU6-702P-201ENST00000364982 107 ntBASIC-0.43□□□□□ -2.48
USP47Q96K76 AC108059.2-201ENST00000434626 151 ntBASIC-0.43□□□□□ -2.48
USP47Q96K76 SNORD4A-201ENST00000459174 72 ntBASIC-0.43□□□□□ -2.48
USP47Q96K76 AL365205.2-201ENST00000594586 68 ntBASIC-0.43□□□□□ -2.48
USP47Q96K76 AL670379.3-201ENST00000605040 251 ntBASIC-0.43□□□□□ -2.48
USP47Q96K76 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.43□□□□□ -2.48
USP47Q96K76 U6.109-201ENST00000636749 87 ntBASIC-0.43□□□□□ -2.48
USP47Q96K76 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.44□□□□□ -2.48
USP47Q96K76 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.44□□□□□ -2.48
USP47Q96K76 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.44□□□□□ -2.48
USP47Q96K76 SNORD42.2-201ENST00000365570 69 ntBASIC-0.44□□□□□ -2.48
USP47Q96K76 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.44□□□□□ -2.48
USP47Q96K76 RNU4-70P-201ENST00000384579 139 ntBASIC-0.44□□□□□ -2.48
USP47Q96K76 MTND5P20-201ENST00000448677 143 ntBASIC-0.44□□□□□ -2.48
USP47Q96K76 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.44□□□□□ -2.48
USP47Q96K76 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.44□□□□□ -2.48
USP47Q96K76 RNU6-180P-201ENST00000516697 61 ntBASIC-0.44□□□□□ -2.48
USP47Q96K76 MIR3925-201ENST00000584674 77 ntBASIC-0.44□□□□□ -2.48
USP47Q96K76 AL442067.1-201ENST00000613261 223 ntBASIC-0.44□□□□□ -2.48
USP47Q96K76 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.45□□□□□ -2.48
USP47Q96K76 SNORA18.1-201ENST00000363418 128 ntBASIC-0.45□□□□□ -2.48
USP47Q96K76 Y_RNA.210-201ENST00000364161 110 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 414.9 ms