Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 MIR5000-201ENST00000577717 103 ntBASIC0.76□□□□□ -2.29
CCDC136Q96JN2 MIR4714-201ENST00000580728 77 ntBASIC0.76□□□□□ -2.29
CCDC136Q96JN2 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.76□□□□□ -2.29
CCDC136Q96JN2 AL590095.2-201ENST00000604136 117 ntBASIC0.76□□□□□ -2.29
CCDC136Q96JN2 AC141273.2-201ENST00000618989 130 ntBASIC0.76□□□□□ -2.29
CCDC136Q96JN2 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
CCDC136Q96JN2 Y_RNA.118-201ENST00000363300 101 ntBASIC0.75□□□□□ -2.29
CCDC136Q96JN2 Y_RNA.337-201ENST00000365312 102 ntBASIC0.75□□□□□ -2.29
CCDC136Q96JN2 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.75□□□□□ -2.29
CCDC136Q96JN2 Y_RNA.793-201ENST00000411222 111 ntBASIC0.75□□□□□ -2.29
CCDC136Q96JN2 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.75□□□□□ -2.29
CCDC136Q96JN2 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.75□□□□□ -2.29
CCDC136Q96JN2 AP002392.1-201ENST00000537692 208 ntBASIC0.75□□□□□ -2.29
CCDC136Q96JN2 AC004812.1-201ENST00000540773 146 ntBASIC0.75□□□□□ -2.29
CCDC136Q96JN2 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
CCDC136Q96JN2 RNU6-349P-201ENST00000362402 107 ntBASIC0.74□□□□□ -2.29
CCDC136Q96JN2 RNU6-818P-201ENST00000364837 108 ntBASIC0.74□□□□□ -2.29
CCDC136Q96JN2 RNA5SP144-201ENST00000410846 116 ntBASIC0.74□□□□□ -2.29
CCDC136Q96JN2 RNU5E-9P-201ENST00000411164 104 ntBASIC0.74□□□□□ -2.29
CCDC136Q96JN2 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.74□□□□□ -2.29
CCDC136Q96JN2 AC072026.1-201ENST00000605023 201 ntBASIC0.74□□□□□ -2.29
CCDC136Q96JN2 MIR8066-201ENST00000617280 78 ntBASIC0.74□□□□□ -2.29
CCDC136Q96JN2 MIR3658-201ENST00000636291 56 ntBASIC0.74□□□□□ -2.29
CCDC136Q96JN2 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CCDC136Q96JN2 RNU6-403P-201ENST00000363163 104 ntBASIC0.73□□□□□ -2.29
CCDC136Q96JN2 SNORA75.5-201ENST00000391291 81 ntBASIC0.73□□□□□ -2.29
CCDC136Q96JN2 SNORD100-201ENST00000408573 76 ntBASIC0.73□□□□□ -2.29
CCDC136Q96JN2 Y_RNA.617-201ENST00000410920 90 ntBASIC0.73□□□□□ -2.29
CCDC136Q96JN2 AC002350.1-201ENST00000490759 375 ntBASIC0.73□□□□□ -2.29
CCDC136Q96JN2 RNU6-138P-201ENST00000515952 107 ntBASIC0.73□□□□□ -2.29
CCDC136Q96JN2 AC022709.1-201ENST00000615967 87 ntBASIC0.73□□□□□ -2.29
CCDC136Q96JN2 AL589743.1-201ENST00000551932 2712 ntBASIC0.73□□□□□ -2.29
CCDC136Q96JN2 Y_RNA.42-201ENST00000362660 108 ntBASIC0.72□□□□□ -2.29
CCDC136Q96JN2 RNU6-588P-201ENST00000410281 105 ntBASIC0.72□□□□□ -2.29
CCDC136Q96JN2 AC096949.1-201ENST00000412047 152 ntBASIC0.72□□□□□ -2.29
CCDC136Q96JN2 MIR6844-201ENST00000637122 62 ntBASIC0.72□□□□□ -2.29
CCDC136Q96JN2 Y_RNA.357-201ENST00000365487 109 ntBASIC0.71□□□□□ -2.3
CCDC136Q96JN2 Y_RNA.470-201ENST00000384307 117 ntBASIC0.71□□□□□ -2.3
CCDC136Q96JN2 Y_RNA.552-201ENST00000384665 112 ntBASIC0.71□□□□□ -2.3
CCDC136Q96JN2 RNU6-679P-201ENST00000391003 106 ntBASIC0.71□□□□□ -2.3
CCDC136Q96JN2 snosnR66.1-201ENST00000391095 99 ntBASIC0.71□□□□□ -2.3
CCDC136Q96JN2 RNU6-448P-201ENST00000517052 107 ntBASIC0.71□□□□□ -2.3
CCDC136Q96JN2 Y_RNA.13-201ENST00000362403 112 ntBASIC0.7□□□□□ -2.3
CCDC136Q96JN2 RNY1P11-201ENST00000363759 113 ntBASIC0.7□□□□□ -2.3
CCDC136Q96JN2 RNY1P13-201ENST00000365030 105 ntBASIC0.7□□□□□ -2.3
CCDC136Q96JN2 RNU6-949P-201ENST00000384040 107 ntBASIC0.7□□□□□ -2.3
CCDC136Q96JN2 Y_RNA.476-201ENST00000384347 108 ntBASIC0.7□□□□□ -2.3
CCDC136Q96JN2 Y_RNA.497-201ENST00000384447 98 ntBASIC0.7□□□□□ -2.3
CCDC136Q96JN2 RNU6-239P-201ENST00000390990 99 ntBASIC0.7□□□□□ -2.3
CCDC136Q96JN2 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.7□□□□□ -2.3
CCDC136Q96JN2 RNU6-893P-201ENST00000458841 100 ntBASIC0.7□□□□□ -2.3
CCDC136Q96JN2 MIR6515-201ENST00000619843 57 ntBASIC0.7□□□□□ -2.3
CCDC136Q96JN2 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.7□□□□□ -2.3
CCDC136Q96JN2 RNU4-84P-201ENST00000364200 139 ntBASIC0.69□□□□□ -2.3
CCDC136Q96JN2 RNU6-200P-201ENST00000364743 107 ntBASIC0.69□□□□□ -2.3
CCDC136Q96JN2 RNU6-690P-201ENST00000365242 106 ntBASIC0.69□□□□□ -2.3
CCDC136Q96JN2 RNU4-45P-201ENST00000365469 141 ntBASIC0.69□□□□□ -2.3
CCDC136Q96JN2 SNORA72.6-201ENST00000384520 129 ntBASIC0.69□□□□□ -2.3
CCDC136Q96JN2 MT-TG-201ENST00000387429 68 ntBASIC0.69□□□□□ -2.3
CCDC136Q96JN2 Y_RNA.588-201ENST00000391254 102 ntBASIC0.69□□□□□ -2.3
CCDC136Q96JN2 RNU7-113P-201ENST00000459273 62 ntBASIC0.69□□□□□ -2.3
CCDC136Q96JN2 RNU6-861P-201ENST00000516745 106 ntBASIC0.69□□□□□ -2.3
CCDC136Q96JN2 RNU2-60P-201ENST00000517290 128 ntBASIC0.69□□□□□ -2.3
CCDC136Q96JN2 MIR4491-201ENST00000581087 68 ntBASIC0.69□□□□□ -2.3
CCDC136Q96JN2 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.68□□□□□ -2.3
CCDC136Q96JN2 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.68□□□□□ -2.3
CCDC136Q96JN2 SNORA32-201ENST00000384072 121 ntBASIC0.67□□□□□ -2.3
CCDC136Q96JN2 SNORD37.2-201ENST00000391075 66 ntBASIC0.67□□□□□ -2.3
CCDC136Q96JN2 AL022718.1-201ENST00000412004 84 ntBASIC0.67□□□□□ -2.3
CCDC136Q96JN2 RNU6-240P-201ENST00000516098 97 ntBASIC0.67□□□□□ -2.3
CCDC136Q96JN2 MIR6082-201ENST00000613604 109 ntBASIC0.67□□□□□ -2.3
CCDC136Q96JN2 RNA5SP117-201ENST00000365294 118 ntBASIC0.66□□□□□ -2.3
CCDC136Q96JN2 RNU6-1086P-201ENST00000410930 100 ntBASIC0.66□□□□□ -2.3
CCDC136Q96JN2 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.66□□□□□ -2.3
CCDC136Q96JN2 AL512326.2-201ENST00000426359 151 ntBASIC0.66□□□□□ -2.3
CCDC136Q96JN2 SNORA68.3-201ENST00000515906 83 ntBASIC0.66□□□□□ -2.3
CCDC136Q96JN2 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.66□□□□□ -2.3
CCDC136Q96JN2 RNU6-508P-201ENST00000363231 103 ntBASIC0.65□□□□□ -2.31
CCDC136Q96JN2 Y_RNA.240-201ENST00000364469 95 ntBASIC0.65□□□□□ -2.31
CCDC136Q96JN2 MIR489-201ENST00000384923 84 ntBASIC0.65□□□□□ -2.31
CCDC136Q96JN2 RNU7-120P-201ENST00000459334 63 ntBASIC0.65□□□□□ -2.31
CCDC136Q96JN2 RNA5SP436-201ENST00000516020 115 ntBASIC0.65□□□□□ -2.31
CCDC136Q96JN2 RNU7-79P-201ENST00000516082 62 ntBASIC0.65□□□□□ -2.31
CCDC136Q96JN2 RN7SKP12-201ENST00000516275 143 ntBASIC0.65□□□□□ -2.31
CCDC136Q96JN2 RNA5SP33-201ENST00000516687 98 ntBASIC0.65□□□□□ -2.31
CCDC136Q96JN2 MIR3646-201ENST00000578301 84 ntBASIC0.65□□□□□ -2.31
CCDC136Q96JN2 AC092634.7-201ENST00000621022 103 ntBASIC0.65□□□□□ -2.31
CCDC136Q96JN2 Y_RNA.120-201ENST00000363304 110 ntBASIC0.64□□□□□ -2.31
CCDC136Q96JN2 RNU6-682P-201ENST00000363843 106 ntBASIC0.64□□□□□ -2.31
CCDC136Q96JN2 RNA5SP499-201ENST00000363982 119 ntBASIC0.64□□□□□ -2.31
CCDC136Q96JN2 RNU2-35P-201ENST00000516446 142 ntBASIC0.64□□□□□ -2.31
CCDC136Q96JN2 RNU7-121P-201ENST00000516604 62 ntBASIC0.64□□□□□ -2.31
CCDC136Q96JN2 SNORA25.16-201ENST00000516741 121 ntBASIC0.64□□□□□ -2.31
CCDC136Q96JN2 RNA5SP94-201ENST00000516917 108 ntBASIC0.64□□□□□ -2.31
CCDC136Q96JN2 RNU7-35P-201ENST00000517174 62 ntBASIC0.64□□□□□ -2.31
CCDC136Q96JN2 AC133485.4-201ENST00000561835 220 ntBASIC0.64□□□□□ -2.31
CCDC136Q96JN2 MIR3678-201ENST00000578455 94 ntBASIC0.64□□□□□ -2.31
CCDC136Q96JN2 MIR4305-201ENST00000583252 102 ntBASIC0.64□□□□□ -2.31
CCDC136Q96JN2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.63□□□□□ -2.31
CCDC136Q96JN2 DNAJC19P2-201ENST00000593340 302 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms