Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 RNA5SP33-201ENST00000516687 98 ntBASIC1.49□□□□□ -2.17
VCPIP1Q96JH7 MIR4421-201ENST00000578133 69 ntBASIC1.49□□□□□ -2.17
VCPIP1Q96JH7 AL020996.3-201ENST00000606617 222 ntBASIC1.49□□□□□ -2.17
VCPIP1Q96JH7 AL162726.3-218ENST00000636401 95 ntBASIC1.49□□□□□ -2.17
VCPIP1Q96JH7 Y_RNA.470-201ENST00000384307 117 ntBASIC1.48□□□□□ -2.17
VCPIP1Q96JH7 MIR520C-201ENST00000385005 87 ntBASIC1.48□□□□□ -2.17
VCPIP1Q96JH7 RNY4P30-201ENST00000410216 95 ntBASIC1.48□□□□□ -2.17
VCPIP1Q96JH7 RPS27P16-201ENST00000425758 201 ntBASIC1.48□□□□□ -2.17
VCPIP1Q96JH7 AC027119.1-201ENST00000440877 241 ntBASIC1.48□□□□□ -2.17
VCPIP1Q96JH7 snoU13.16-201ENST00000459350 104 ntBASIC1.48□□□□□ -2.17
VCPIP1Q96JH7 AC079140.2-201ENST00000506193 142 ntBASIC1.48□□□□□ -2.17
VCPIP1Q96JH7 RNU7-43P-201ENST00000516554 64 ntBASIC1.48□□□□□ -2.17
VCPIP1Q96JH7 AC141557.1-201ENST00000540982 400 ntBASIC1.48□□□□□ -2.17
VCPIP1Q96JH7 MIR4764-201ENST00000580680 88 ntBASIC1.48□□□□□ -2.17
VCPIP1Q96JH7 Y_RNA.773-201ENST00000607168 90 ntBASIC1.48□□□□□ -2.17
VCPIP1Q96JH7 MIR6841-201ENST00000637129 72 ntBASIC1.48□□□□□ -2.17
VCPIP1Q96JH7 Y_RNA.299-201ENST00000364973 94 ntBASIC1.47□□□□□ -2.17
VCPIP1Q96JH7 SNORA19.1-201ENST00000410656 129 ntBASIC1.47□□□□□ -2.17
VCPIP1Q96JH7 RNU4-69P-201ENST00000410677 143 ntBASIC1.47□□□□□ -2.17
VCPIP1Q96JH7 RNU1-123P-201ENST00000458950 160 ntBASIC1.47□□□□□ -2.17
VCPIP1Q96JH7 AC113410.1-201ENST00000505029 247 ntBASIC1.47□□□□□ -2.17
VCPIP1Q96JH7 RNU6-322P-201ENST00000516010 103 ntBASIC1.47□□□□□ -2.17
VCPIP1Q96JH7 RNU6-109P-201ENST00000516364 107 ntBASIC1.47□□□□□ -2.17
VCPIP1Q96JH7 RNA5SP61-201ENST00000516453 100 ntBASIC1.47□□□□□ -2.17
VCPIP1Q96JH7 RNU6-184P-201ENST00000516514 107 ntBASIC1.47□□□□□ -2.17
VCPIP1Q96JH7 Y_RNA.694-201ENST00000516677 117 ntBASIC1.47□□□□□ -2.17
VCPIP1Q96JH7 RNU6-922P-201ENST00000516753 99 ntBASIC1.47□□□□□ -2.17
VCPIP1Q96JH7 MIR4452-201ENST00000583004 71 ntBASIC1.47□□□□□ -2.17
VCPIP1Q96JH7 MIR548AE2-201ENST00000583456 67 ntBASIC1.47□□□□□ -2.17
VCPIP1Q96JH7 AC008133.2-201ENST00000624540 351 ntBASIC1.47□□□□□ -2.17
VCPIP1Q96JH7 MIR1255B1-201ENST00000636325 63 ntBASIC1.47□□□□□ -2.17
VCPIP1Q96JH7 SNORA1.1-201ENST00000364671 133 ntBASIC1.46□□□□□ -2.18
VCPIP1Q96JH7 SNORA32-201ENST00000384072 121 ntBASIC1.46□□□□□ -2.18
VCPIP1Q96JH7 Y_RNA.430-201ENST00000384081 110 ntBASIC1.46□□□□□ -2.18
VCPIP1Q96JH7 Y_RNA.507-201ENST00000384500 99 ntBASIC1.46□□□□□ -2.18
VCPIP1Q96JH7 MIR590-201ENST00000385008 97 ntBASIC1.46□□□□□ -2.18
VCPIP1Q96JH7 RNU1-78P-201ENST00000391248 165 ntBASIC1.46□□□□□ -2.18
VCPIP1Q96JH7 MIR1912-201ENST00000410389 80 ntBASIC1.46□□□□□ -2.18
VCPIP1Q96JH7 RPS3AP1-201ENST00000413190 320 ntBASIC1.46□□□□□ -2.18
VCPIP1Q96JH7 MIR3937-201ENST00000580135 106 ntBASIC1.46□□□□□ -2.18
VCPIP1Q96JH7 AP001318.4-201ENST00000616637 121 ntBASIC1.46□□□□□ -2.18
VCPIP1Q96JH7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
VCPIP1Q96JH7 SNORD115-2-201ENST00000362842 82 ntBASIC1.45□□□□□ -2.18
VCPIP1Q96JH7 Y_RNA.155-201ENST00000363632 101 ntBASIC1.45□□□□□ -2.18
VCPIP1Q96JH7 SNORD115-20-201ENST00000365099 82 ntBASIC1.45□□□□□ -2.18
VCPIP1Q96JH7 Y_RNA.348-201ENST00000365403 103 ntBASIC1.45□□□□□ -2.18
VCPIP1Q96JH7 RNU6-905P-201ENST00000384434 107 ntBASIC1.45□□□□□ -2.18
VCPIP1Q96JH7 MIR653-201ENST00000385279 96 ntBASIC1.45□□□□□ -2.18
VCPIP1Q96JH7 MIR758-201ENST00000390227 88 ntBASIC1.45□□□□□ -2.18
VCPIP1Q96JH7 SNORD77B-201ENST00000391112 67 ntBASIC1.45□□□□□ -2.18
VCPIP1Q96JH7 AL451046.2-201ENST00000403074 277 ntBASIC1.45□□□□□ -2.18
VCPIP1Q96JH7 RNA5SP102-201ENST00000516865 106 ntBASIC1.45□□□□□ -2.18
VCPIP1Q96JH7 MIR5582-201ENST00000579697 68 ntBASIC1.45□□□□□ -2.18
VCPIP1Q96JH7 AL078603.1-201ENST00000603824 313 ntBASIC1.45□□□□□ -2.18
VCPIP1Q96JH7 MIR8055-201ENST00000610739 97 ntBASIC1.45□□□□□ -2.18
VCPIP1Q96JH7 MIR7974-201ENST00000615835 79 ntBASIC1.45□□□□□ -2.18
VCPIP1Q96JH7 RNU6-42P-201ENST00000384165 107 ntBASIC1.44□□□□□ -2.18
VCPIP1Q96JH7 RNU6-616P-201ENST00000384353 107 ntBASIC1.44□□□□□ -2.18
VCPIP1Q96JH7 SNORD41-201ENST00000386967 70 ntBASIC1.44□□□□□ -2.18
VCPIP1Q96JH7 SNORA7.5-201ENST00000410672 110 ntBASIC1.44□□□□□ -2.18
VCPIP1Q96JH7 RNU1-98P-201ENST00000458992 160 ntBASIC1.44□□□□□ -2.18
VCPIP1Q96JH7 AC006254.2-201ENST00000603259 279 ntBASIC1.44□□□□□ -2.18
VCPIP1Q96JH7 AL353770.2-201ENST00000620024 78 ntBASIC1.44□□□□□ -2.18
VCPIP1Q96JH7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
VCPIP1Q96JH7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
VCPIP1Q96JH7 RNU6-363P-201ENST00000362895 105 ntBASIC1.43□□□□□ -2.18
VCPIP1Q96JH7 SNORD115-19-201ENST00000363098 82 ntBASIC1.43□□□□□ -2.18
VCPIP1Q96JH7 SNORD115-18-201ENST00000363293 82 ntBASIC1.43□□□□□ -2.18
VCPIP1Q96JH7 RNU4-67P-201ENST00000364569 141 ntBASIC1.43□□□□□ -2.18
VCPIP1Q96JH7 SNORD115-17-201ENST00000364612 82 ntBASIC1.43□□□□□ -2.18
VCPIP1Q96JH7 RNU6-409P-201ENST00000384114 104 ntBASIC1.43□□□□□ -2.18
VCPIP1Q96JH7 Y_RNA.544-201ENST00000384650 113 ntBASIC1.43□□□□□ -2.18
VCPIP1Q96JH7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.43□□□□□ -2.18
VCPIP1Q96JH7 AC245047.7-201ENST00000440265 293 ntBASIC1.43□□□□□ -2.18
VCPIP1Q96JH7 RNU7-41P-201ENST00000515917 61 ntBASIC1.43□□□□□ -2.18
VCPIP1Q96JH7 SNORA40.13-201ENST00000516379 120 ntBASIC1.43□□□□□ -2.18
VCPIP1Q96JH7 DEFB131E-201ENST00000532329 154 ntBASIC1.43□□□□□ -2.18
VCPIP1Q96JH7 MIR548AO-201ENST00000579992 96 ntBASIC1.43□□□□□ -2.18
VCPIP1Q96JH7 MIR4251-201ENST00000635819 61 ntBASIC1.43□□□□□ -2.18
VCPIP1Q96JH7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
VCPIP1Q96JH7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
VCPIP1Q96JH7 Y_RNA.78-201ENST00000362970 110 ntBASIC1.42□□□□□ -2.18
VCPIP1Q96JH7 RNU6-640P-201ENST00000363693 105 ntBASIC1.42□□□□□ -2.18
VCPIP1Q96JH7 RNU6-342P-201ENST00000384521 104 ntBASIC1.42□□□□□ -2.18
VCPIP1Q96JH7 MIR605-201ENST00000385078 83 ntBASIC1.42□□□□□ -2.18
VCPIP1Q96JH7 RNU6-733P-201ENST00000410759 104 ntBASIC1.42□□□□□ -2.18
VCPIP1Q96JH7 MIR1270-201ENST00000459320 83 ntBASIC1.42□□□□□ -2.18
VCPIP1Q96JH7 RNU6-904P-201ENST00000516206 101 ntBASIC1.42□□□□□ -2.18
VCPIP1Q96JH7 MIR6734-201ENST00000621166 68 ntBASIC1.42□□□□□ -2.18
VCPIP1Q96JH7 MIR4679-1-201ENST00000637619 75 ntBASIC1.42□□□□□ -2.18
VCPIP1Q96JH7 Z97988.1-201ENST00000637697 135 ntBASIC1.42□□□□□ -2.18
VCPIP1Q96JH7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
VCPIP1Q96JH7 RNU4-36P-201ENST00000364294 144 ntBASIC1.41□□□□□ -2.18
VCPIP1Q96JH7 Y_RNA.354-201ENST00000365448 111 ntBASIC1.41□□□□□ -2.18
VCPIP1Q96JH7 MIR7-2-201ENST00000384970 110 ntBASIC1.41□□□□□ -2.18
VCPIP1Q96JH7 RNU6-602P-201ENST00000411155 105 ntBASIC1.41□□□□□ -2.18
VCPIP1Q96JH7 AC090844.1-201ENST00000422019 156 ntBASIC1.41□□□□□ -2.18
VCPIP1Q96JH7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.41□□□□□ -2.18
VCPIP1Q96JH7 RNA5SP220-201ENST00000516298 104 ntBASIC1.41□□□□□ -2.18
VCPIP1Q96JH7 SNORD111.1-201ENST00000516421 86 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 243.6 ms