Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RNA5SP404-201ENST00000517118 132 ntBASIC1.23□□□□□ -2.21
TRIM43Q96BQ3 AL137067.1-201ENST00000615933 120 ntBASIC1.23□□□□□ -2.21
TRIM43Q96BQ3 RNY1P4-201ENST00000384595 115 ntBASIC1.22□□□□□ -2.21
TRIM43Q96BQ3 MIR19B1-201ENST00000384829 87 ntBASIC1.22□□□□□ -2.21
TRIM43Q96BQ3 RNA5SP237-201ENST00000410414 113 ntBASIC1.22□□□□□ -2.21
TRIM43Q96BQ3 SUMO1P3-201ENST00000439961 304 ntBASIC1.22□□□□□ -2.21
TRIM43Q96BQ3 snoU13.2-201ENST00000459201 104 ntBASIC1.22□□□□□ -2.21
TRIM43Q96BQ3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.22□□□□□ -2.21
TRIM43Q96BQ3 RNU6-580P-201ENST00000365159 107 ntBASIC1.21□□□□□ -2.22
TRIM43Q96BQ3 MIR539-201ENST00000365690 78 ntBASIC1.21□□□□□ -2.22
TRIM43Q96BQ3 RNU6-187P-201ENST00000384139 106 ntBASIC1.21□□□□□ -2.22
TRIM43Q96BQ3 AC067940.1-201ENST00000458411 300 ntBASIC1.21□□□□□ -2.22
TRIM43Q96BQ3 AC108081.1-201ENST00000604358 221 ntBASIC1.21□□□□□ -2.22
TRIM43Q96BQ3 AC211469.2-201ENST00000605461 205 ntBASIC1.21□□□□□ -2.22
TRIM43Q96BQ3 AC012676.2-201ENST00000619258 186 ntBASIC1.21□□□□□ -2.22
TRIM43Q96BQ3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
TRIM43Q96BQ3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.2□□□□□ -2.22
TRIM43Q96BQ3 Y_RNA.171-201ENST00000363760 102 ntBASIC1.2□□□□□ -2.22
TRIM43Q96BQ3 Y_RNA.294-201ENST00000364916 102 ntBASIC1.2□□□□□ -2.22
TRIM43Q96BQ3 AL603908.1-201ENST00000406098 201 ntBASIC1.2□□□□□ -2.22
TRIM43Q96BQ3 RNU6-1165P-201ENST00000410119 107 ntBASIC1.2□□□□□ -2.22
TRIM43Q96BQ3 AC113410.1-201ENST00000505029 247 ntBASIC1.2□□□□□ -2.22
TRIM43Q96BQ3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.2□□□□□ -2.22
TRIM43Q96BQ3 RNU6-94P-201ENST00000607728 107 ntBASIC1.2□□□□□ -2.22
TRIM43Q96BQ3 MIR6740-201ENST00000618268 113 ntBASIC1.2□□□□□ -2.22
TRIM43Q96BQ3 Y_RNA.30-201ENST00000362572 97 ntBASIC1.19□□□□□ -2.22
TRIM43Q96BQ3 RNU1-124P-201ENST00000363861 145 ntBASIC1.19□□□□□ -2.22
TRIM43Q96BQ3 RNU6-704P-201ENST00000364162 103 ntBASIC1.19□□□□□ -2.22
TRIM43Q96BQ3 RNU6-1237P-201ENST00000384777 107 ntBASIC1.19□□□□□ -2.22
TRIM43Q96BQ3 MIR200A-201ENST00000384875 90 ntBASIC1.19□□□□□ -2.22
TRIM43Q96BQ3 Y_RNA.586-201ENST00000391146 98 ntBASIC1.19□□□□□ -2.22
TRIM43Q96BQ3 AL158147.1-201ENST00000443970 75 ntBASIC1.19□□□□□ -2.22
TRIM43Q96BQ3 RNU6-1211P-201ENST00000459179 105 ntBASIC1.19□□□□□ -2.22
TRIM43Q96BQ3 RNU2-35P-201ENST00000516446 142 ntBASIC1.19□□□□□ -2.22
TRIM43Q96BQ3 Y_RNA.298-201ENST00000364960 107 ntBASIC1.18□□□□□ -2.22
TRIM43Q96BQ3 MIR216A-201ENST00000385063 110 ntBASIC1.18□□□□□ -2.22
TRIM43Q96BQ3 RNU7-123P-201ENST00000515911 60 ntBASIC1.18□□□□□ -2.22
TRIM43Q96BQ3 RNA5SP33-201ENST00000516687 98 ntBASIC1.18□□□□□ -2.22
TRIM43Q96BQ3 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.18□□□□□ -2.22
TRIM43Q96BQ3 AC004812.1-201ENST00000540773 146 ntBASIC1.18□□□□□ -2.22
TRIM43Q96BQ3 MIR3973-201ENST00000579824 107 ntBASIC1.18□□□□□ -2.22
TRIM43Q96BQ3 SNORA18-201ENST00000384416 132 ntBASIC1.17□□□□□ -2.22
TRIM43Q96BQ3 Y_RNA.531-201ENST00000384589 121 ntBASIC1.17□□□□□ -2.22
TRIM43Q96BQ3 MIR942-201ENST00000401111 86 ntBASIC1.17□□□□□ -2.22
TRIM43Q96BQ3 AL512326.2-201ENST00000426359 151 ntBASIC1.17□□□□□ -2.22
TRIM43Q96BQ3 FABP5P4-201ENST00000437203 171 ntBASIC1.17□□□□□ -2.22
TRIM43Q96BQ3 RPL39P25-201ENST00000449384 154 ntBASIC1.17□□□□□ -2.22
TRIM43Q96BQ3 RN7SKP19-201ENST00000516016 252 ntBASIC1.17□□□□□ -2.22
TRIM43Q96BQ3 RNY4P20-201ENST00000516678 93 ntBASIC1.17□□□□□ -2.22
TRIM43Q96BQ3 RNU6-1258P-201ENST00000516911 111 ntBASIC1.17□□□□□ -2.22
TRIM43Q96BQ3 CYP3A137P-201ENST00000562436 69 ntBASIC1.17□□□□□ -2.22
TRIM43Q96BQ3 Y_RNA.280-201ENST00000364765 112 ntBASIC1.16□□□□□ -2.22
TRIM43Q96BQ3 SNORD114-24-201ENST00000365029 72 ntBASIC1.16□□□□□ -2.22
TRIM43Q96BQ3 RNU6-934P-201ENST00000365154 107 ntBASIC1.16□□□□□ -2.22
TRIM43Q96BQ3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
TRIM43Q96BQ3 RPS29P28-201ENST00000446439 141 ntBASIC1.16□□□□□ -2.22
TRIM43Q96BQ3 MIR18B-201ENST00000454574 71 ntBASIC1.16□□□□□ -2.22
TRIM43Q96BQ3 SNORD124-201ENST00000459577 104 ntBASIC1.16□□□□□ -2.22
TRIM43Q96BQ3 AL662814.1-201ENST00000617364 121 ntBASIC1.16□□□□□ -2.22
TRIM43Q96BQ3 RNU6-235P-201ENST00000362644 107 ntBASIC1.15□□□□□ -2.23
TRIM43Q96BQ3 SNORD115-2-201ENST00000362842 82 ntBASIC1.15□□□□□ -2.23
TRIM43Q96BQ3 SNORD115-20-201ENST00000365099 82 ntBASIC1.15□□□□□ -2.23
TRIM43Q96BQ3 MIR563-201ENST00000385080 79 ntBASIC1.15□□□□□ -2.23
TRIM43Q96BQ3 MT-TF-201ENST00000387314 71 ntBASIC1.15□□□□□ -2.23
TRIM43Q96BQ3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.15□□□□□ -2.23
TRIM43Q96BQ3 SNORD83.1-201ENST00000411362 77 ntBASIC1.15□□□□□ -2.23
TRIM43Q96BQ3 TMSB4XP3-201ENST00000445144 114 ntBASIC1.15□□□□□ -2.23
TRIM43Q96BQ3 RNU6-971P-201ENST00000516920 106 ntBASIC1.15□□□□□ -2.23
TRIM43Q96BQ3 SNORD114-21-201ENST00000606412 72 ntBASIC1.15□□□□□ -2.23
TRIM43Q96BQ3 Y_RNA.299-201ENST00000364973 94 ntBASIC1.14□□□□□ -2.23
TRIM43Q96BQ3 Y_RNA.470-201ENST00000384307 117 ntBASIC1.14□□□□□ -2.23
TRIM43Q96BQ3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.14□□□□□ -2.23
TRIM43Q96BQ3 RNU6-1061P-201ENST00000516530 99 ntBASIC1.14□□□□□ -2.23
TRIM43Q96BQ3 AL136317.1-201ENST00000612653 226 ntBASIC1.14□□□□□ -2.23
TRIM43Q96BQ3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
TRIM43Q96BQ3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.13□□□□□ -2.23
TRIM43Q96BQ3 MIR1-1-201ENST00000362147 71 ntBASIC1.13□□□□□ -2.23
TRIM43Q96BQ3 MIR1263-201ENST00000408324 86 ntBASIC1.13□□□□□ -2.23
TRIM43Q96BQ3 RNA5SP136-201ENST00000410906 107 ntBASIC1.13□□□□□ -2.23
TRIM43Q96BQ3 snoU13.21-201ENST00000459368 105 ntBASIC1.13□□□□□ -2.23
TRIM43Q96BQ3 AC141846.1-201ENST00000568348 142 ntBASIC1.13□□□□□ -2.23
TRIM43Q96BQ3 MIR4771-2-201ENST00000577758 74 ntBASIC1.13□□□□□ -2.23
TRIM43Q96BQ3 MIR4771-1-201ENST00000582617 74 ntBASIC1.13□□□□□ -2.23
TRIM43Q96BQ3 uc_338.6-201ENST00000613544 171 ntBASIC1.13□□□□□ -2.23
TRIM43Q96BQ3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.13□□□□□ -2.23
TRIM43Q96BQ3 MIR30D-201ENST00000362283 70 ntBASIC1.12□□□□□ -2.23
TRIM43Q96BQ3 SNORA32-201ENST00000384072 121 ntBASIC1.12□□□□□ -2.23
TRIM43Q96BQ3 MIR100-201ENST00000385259 80 ntBASIC1.12□□□□□ -2.23
TRIM43Q96BQ3 MIR759-201ENST00000390224 91 ntBASIC1.12□□□□□ -2.23
TRIM43Q96BQ3 RNU6-1086P-201ENST00000410930 100 ntBASIC1.12□□□□□ -2.23
TRIM43Q96BQ3 AC023934.1-201ENST00000574529 2389 ntBASIC1.11□□□□□ -2.23
TRIM43Q96BQ3 MIR1257-201ENST00000408490 117 ntBASIC1.11□□□□□ -2.23
TRIM43Q96BQ3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.11□□□□□ -2.23
TRIM43Q96BQ3 Y_RNA.617-201ENST00000410920 90 ntBASIC1.11□□□□□ -2.23
TRIM43Q96BQ3 RPS26P5-201ENST00000418544 335 ntBASIC1.11□□□□□ -2.23
TRIM43Q96BQ3 RN7SKP179-201ENST00000516126 217 ntBASIC1.11□□□□□ -2.23
TRIM43Q96BQ3 IGKV1-22-201ENST00000524313 326 ntBASIC1.11□□□□□ -2.23
TRIM43Q96BQ3 MIR548AE2-201ENST00000583456 67 ntBASIC1.11□□□□□ -2.23
TRIM43Q96BQ3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
TRIM43Q96BQ3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms