Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 Y_RNA.668-201ENST00000516233 93 ntBASIC0.2□□□□□ -2.38
VPS33AQ96AX1 RNA5SP268-201ENST00000516828 124 ntBASIC0.2□□□□□ -2.38
VPS33AQ96AX1 MIR4308-201ENST00000580634 81 ntBASIC0.2□□□□□ -2.38
VPS33AQ96AX1 Y_RNA.269-201ENST00000364685 89 ntBASIC0.19□□□□□ -2.38
VPS33AQ96AX1 Y_RNA.536-201ENST00000384621 113 ntBASIC0.19□□□□□ -2.38
VPS33AQ96AX1 Y_RNA.539-201ENST00000384635 107 ntBASIC0.19□□□□□ -2.38
VPS33AQ96AX1 RNU6-1194P-201ENST00000516208 104 ntBASIC0.19□□□□□ -2.38
VPS33AQ96AX1 SNORA31.14-201ENST00000516728 116 ntBASIC0.19□□□□□ -2.38
VPS33AQ96AX1 MRPS18CP4-201ENST00000535821 231 ntBASIC0.19□□□□□ -2.38
VPS33AQ96AX1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.19□□□□□ -2.38
VPS33AQ96AX1 MTND5P32-201ENST00000560711 1802 ntBASIC0.18□□□□□ -2.38
VPS33AQ96AX1 Y_RNA.75-201ENST00000362927 97 ntBASIC0.18□□□□□ -2.38
VPS33AQ96AX1 RNU6-1229P-201ENST00000364295 107 ntBASIC0.18□□□□□ -2.38
VPS33AQ96AX1 RNU6-923P-201ENST00000364753 107 ntBASIC0.18□□□□□ -2.38
VPS33AQ96AX1 RNU4-71P-201ENST00000516258 113 ntBASIC0.18□□□□□ -2.38
VPS33AQ96AX1 Y_RNA.697-201ENST00000516776 113 ntBASIC0.18□□□□□ -2.38
VPS33AQ96AX1 SCARNA16.5-201ENST00000517114 183 ntBASIC0.18□□□□□ -2.38
VPS33AQ96AX1 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.18□□□□□ -2.38
VPS33AQ96AX1 AL360085.1-201ENST00000604713 532 ntBASIC0.18□□□□□ -2.38
VPS33AQ96AX1 MIR6734-201ENST00000621166 68 ntBASIC0.18□□□□□ -2.38
VPS33AQ96AX1 MIR6828-201ENST00000636181 60 ntBASIC0.18□□□□□ -2.38
VPS33AQ96AX1 MIR4315-1-201ENST00000636800 73 ntBASIC0.18□□□□□ -2.38
VPS33AQ96AX1 MIR4315-2-201ENST00000640925 73 ntBASIC0.18□□□□□ -2.38
VPS33AQ96AX1 AL589743.1-201ENST00000551932 2712 ntBASIC0.17□□□□□ -2.38
VPS33AQ96AX1 Y_RNA.65-201ENST00000362846 100 ntBASIC0.17□□□□□ -2.38
VPS33AQ96AX1 Y_RNA.350-201ENST00000365409 98 ntBASIC0.17□□□□□ -2.38
VPS33AQ96AX1 RNU6-42P-201ENST00000384165 107 ntBASIC0.17□□□□□ -2.38
VPS33AQ96AX1 RNU6-291P-201ENST00000384720 107 ntBASIC0.17□□□□□ -2.38
VPS33AQ96AX1 RNA5SP144-201ENST00000410846 116 ntBASIC0.17□□□□□ -2.38
VPS33AQ96AX1 AC073261.1-201ENST00000429409 121 ntBASIC0.17□□□□□ -2.38
VPS33AQ96AX1 RNU7-35P-201ENST00000517174 62 ntBASIC0.17□□□□□ -2.38
VPS33AQ96AX1 AC069113.3-201ENST00000521019 150 ntBASIC0.17□□□□□ -2.38
VPS33AQ96AX1 AC112693.2-201ENST00000556538 232 ntBASIC0.17□□□□□ -2.38
VPS33AQ96AX1 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
VPS33AQ96AX1 RNU6-535P-201ENST00000384722 107 ntBASIC0.16□□□□□ -2.38
VPS33AQ96AX1 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
VPS33AQ96AX1 AL022718.1-201ENST00000412004 84 ntBASIC0.16□□□□□ -2.38
VPS33AQ96AX1 RNA5SP436-201ENST00000516020 115 ntBASIC0.16□□□□□ -2.38
VPS33AQ96AX1 RNU7-79P-201ENST00000516082 62 ntBASIC0.16□□□□□ -2.38
VPS33AQ96AX1 RNU6-1258P-201ENST00000516911 111 ntBASIC0.16□□□□□ -2.38
VPS33AQ96AX1 MIR4639-201ENST00000584938 69 ntBASIC0.16□□□□□ -2.38
VPS33AQ96AX1 Y_RNA.133-201ENST00000363428 110 ntBASIC0.15□□□□□ -2.39
VPS33AQ96AX1 Y_RNA.435-201ENST00000384095 112 ntBASIC0.15□□□□□ -2.39
VPS33AQ96AX1 Y_RNA.521-201ENST00000384560 114 ntBASIC0.15□□□□□ -2.39
VPS33AQ96AX1 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
VPS33AQ96AX1 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.15□□□□□ -2.39
VPS33AQ96AX1 Y_RNA.676-201ENST00000516393 96 ntBASIC0.15□□□□□ -2.39
VPS33AQ96AX1 SNORA25.16-201ENST00000516741 121 ntBASIC0.15□□□□□ -2.39
VPS33AQ96AX1 RNA5SP47-201ENST00000517230 109 ntBASIC0.15□□□□□ -2.39
VPS33AQ96AX1 AC091304.10-201ENST00000641554 121 ntBASIC0.15□□□□□ -2.39
VPS33AQ96AX1 Y_RNA.52-201ENST00000362760 96 ntBASIC0.14□□□□□ -2.39
VPS33AQ96AX1 SNORD115-2-201ENST00000362842 82 ntBASIC0.14□□□□□ -2.39
VPS33AQ96AX1 Y_RNA.171-201ENST00000363760 102 ntBASIC0.14□□□□□ -2.39
VPS33AQ96AX1 SNORD115-20-201ENST00000365099 82 ntBASIC0.14□□□□□ -2.39
VPS33AQ96AX1 Y_RNA.412-201ENST00000384001 104 ntBASIC0.14□□□□□ -2.39
VPS33AQ96AX1 RNU7-113P-201ENST00000459273 62 ntBASIC0.14□□□□□ -2.39
VPS33AQ96AX1 Y_RNA.673-201ENST00000516306 88 ntBASIC0.14□□□□□ -2.39
VPS33AQ96AX1 MTND5P34-201ENST00000568888 325 ntBASIC0.14□□□□□ -2.39
VPS33AQ96AX1 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.14□□□□□ -2.39
VPS33AQ96AX1 MIR7107-201ENST00000611489 80 ntBASIC0.14□□□□□ -2.39
VPS33AQ96AX1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.14□□□□□ -2.39
VPS33AQ96AX1 RNU4-58P-201ENST00000363192 141 ntBASIC0.13□□□□□ -2.39
VPS33AQ96AX1 Y_RNA.393-201ENST00000383936 102 ntBASIC0.13□□□□□ -2.39
VPS33AQ96AX1 RNU6-815P-201ENST00000384080 113 ntBASIC0.13□□□□□ -2.39
VPS33AQ96AX1 SNORD28-201ENST00000384706 75 ntBASIC0.13□□□□□ -2.39
VPS33AQ96AX1 RNU6-848P-201ENST00000515948 107 ntBASIC0.13□□□□□ -2.39
VPS33AQ96AX1 RNU6-617P-201ENST00000516147 107 ntBASIC0.13□□□□□ -2.39
VPS33AQ96AX1 RNU6-473P-201ENST00000516164 107 ntBASIC0.13□□□□□ -2.39
VPS33AQ96AX1 RNA5SP227-201ENST00000516184 113 ntBASIC0.13□□□□□ -2.39
VPS33AQ96AX1 RNU6-1049P-201ENST00000516414 107 ntBASIC0.13□□□□□ -2.39
VPS33AQ96AX1 U6.106-201ENST00000636360 105 ntBASIC0.13□□□□□ -2.39
VPS33AQ96AX1 RNU6-694P-201ENST00000364071 147 ntBASIC0.12□□□□□ -2.39
VPS33AQ96AX1 RNY1-201ENST00000364228 113 ntBASIC0.12□□□□□ -2.39
VPS33AQ96AX1 Y_RNA.477-201ENST00000384352 108 ntBASIC0.12□□□□□ -2.39
VPS33AQ96AX1 MIRLET7F2-201ENST00000385277 83 ntBASIC0.12□□□□□ -2.39
VPS33AQ96AX1 SUMO1P3-201ENST00000439961 304 ntBASIC0.12□□□□□ -2.39
VPS33AQ96AX1 RNA5SP236-201ENST00000516169 116 ntBASIC0.12□□□□□ -2.39
VPS33AQ96AX1 AC062037.2-201ENST00000610137 73 ntBASIC0.12□□□□□ -2.39
VPS33AQ96AX1 AC011603.4-201ENST00000611325 277 ntBASIC0.12□□□□□ -2.39
VPS33AQ96AX1 Y_RNA.470-201ENST00000384307 117 ntBASIC0.11□□□□□ -2.39
VPS33AQ96AX1 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
VPS33AQ96AX1 RNU6-1023P-201ENST00000516137 106 ntBASIC0.11□□□□□ -2.39
VPS33AQ96AX1 RNU6-327P-201ENST00000516270 127 ntBASIC0.11□□□□□ -2.39
VPS33AQ96AX1 RNA5SP33-201ENST00000516687 98 ntBASIC0.11□□□□□ -2.39
VPS33AQ96AX1 DEFB131E-201ENST00000532329 154 ntBASIC0.11□□□□□ -2.39
VPS33AQ96AX1 SNORA42.1-201ENST00000363515 137 ntBASIC0.1□□□□□ -2.39
VPS33AQ96AX1 MIR568-201ENST00000385036 95 ntBASIC0.1□□□□□ -2.39
VPS33AQ96AX1 MIR3128-201ENST00000581957 66 ntBASIC0.1□□□□□ -2.39
VPS33AQ96AX1 Y_RNA.120-201ENST00000363304 110 ntBASIC0.09□□□□□ -2.4
VPS33AQ96AX1 RNU6-1126P-201ENST00000384002 107 ntBASIC0.09□□□□□ -2.4
VPS33AQ96AX1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
VPS33AQ96AX1 RNU6-918P-201ENST00000391219 106 ntBASIC0.09□□□□□ -2.4
VPS33AQ96AX1 MIR1287-201ENST00000408492 90 ntBASIC0.09□□□□□ -2.4
VPS33AQ96AX1 AC107027.2-201ENST00000512197 115 ntBASIC0.09□□□□□ -2.4
VPS33AQ96AX1 AC098479.1-201ENST00000609225 154 ntBASIC0.09□□□□□ -2.4
VPS33AQ96AX1 SNORA9.1-201ENST00000362412 131 ntBASIC0.08□□□□□ -2.4
VPS33AQ96AX1 RNA5SP133-201ENST00000363368 119 ntBASIC0.08□□□□□ -2.4
VPS33AQ96AX1 RNU6-690P-201ENST00000365242 106 ntBASIC0.08□□□□□ -2.4
VPS33AQ96AX1 RNU6-1336P-201ENST00000383886 109 ntBASIC0.08□□□□□ -2.4
VPS33AQ96AX1 MTATP6P21-201ENST00000440681 189 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 264.4 ms