Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 SNORD114-10-201ENST00000363409 72 ntBASIC1.87□□□□□ -2.11
BRF1Q92994 RNU6-1201P-201ENST00000384227 107 ntBASIC1.87□□□□□ -2.11
BRF1Q92994 Y_RNA.466-201ENST00000384294 113 ntBASIC1.87□□□□□ -2.11
BRF1Q92994 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.87□□□□□ -2.11
BRF1Q92994 snoU13.2-201ENST00000459201 104 ntBASIC1.87□□□□□ -2.11
BRF1Q92994 RNA5SP445-201ENST00000515889 115 ntBASIC1.87□□□□□ -2.11
BRF1Q92994 MIR5582-201ENST00000579697 68 ntBASIC1.87□□□□□ -2.11
BRF1Q92994 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.87□□□□□ -2.11
BRF1Q92994 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.87□□□□□ -2.11
BRF1Q92994 MIR206-201ENST00000384872 86 ntBASIC1.86□□□□□ -2.11
BRF1Q92994 MT-TN-201ENST00000387400 73 ntBASIC1.86□□□□□ -2.11
BRF1Q92994 MTATP8P2-201ENST00000435212 202 ntBASIC1.86□□□□□ -2.11
BRF1Q92994 AC245517.4-201ENST00000448601 281 ntBASIC1.86□□□□□ -2.11
BRF1Q92994 RNU6-970P-201ENST00000516312 107 ntBASIC1.86□□□□□ -2.11
BRF1Q92994 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.86□□□□□ -2.11
BRF1Q92994 MIR3664-201ENST00000579074 99 ntBASIC1.86□□□□□ -2.11
BRF1Q92994 SNORA25.3-201ENST00000363205 127 ntBASIC1.85□□□□□ -2.11
BRF1Q92994 MIR563-201ENST00000385080 79 ntBASIC1.85□□□□□ -2.11
BRF1Q92994 RNU6-447P-201ENST00000410293 104 ntBASIC1.85□□□□□ -2.11
BRF1Q92994 RNU6-1118P-201ENST00000410382 104 ntBASIC1.85□□□□□ -2.11
BRF1Q92994 RNU6-1076P-201ENST00000410397 104 ntBASIC1.85□□□□□ -2.11
BRF1Q92994 RNU6-355P-201ENST00000410427 104 ntBASIC1.85□□□□□ -2.11
BRF1Q92994 RNU6-791P-201ENST00000410467 104 ntBASIC1.85□□□□□ -2.11
BRF1Q92994 RNU6-705P-201ENST00000410601 104 ntBASIC1.85□□□□□ -2.11
BRF1Q92994 RNU6-1100P-201ENST00000410691 104 ntBASIC1.85□□□□□ -2.11
BRF1Q92994 RNU6-860P-201ENST00000410860 104 ntBASIC1.85□□□□□ -2.11
BRF1Q92994 RNU6-1217P-201ENST00000411276 104 ntBASIC1.85□□□□□ -2.11
BRF1Q92994 RNU6-785P-201ENST00000411324 104 ntBASIC1.85□□□□□ -2.11
BRF1Q92994 AC096949.1-201ENST00000412047 152 ntBASIC1.85□□□□□ -2.11
BRF1Q92994 RNU6-947P-201ENST00000516264 106 ntBASIC1.85□□□□□ -2.11
BRF1Q92994 SNORD67.1-201ENST00000516618 108 ntBASIC1.85□□□□□ -2.11
BRF1Q92994 MIR2115-201ENST00000516657 100 ntBASIC1.85□□□□□ -2.11
BRF1Q92994 RNU7-137P-201ENST00000516788 62 ntBASIC1.85□□□□□ -2.11
BRF1Q92994 MIR4422-201ENST00000581938 83 ntBASIC1.85□□□□□ -2.11
BRF1Q92994 MIR4264-201ENST00000583520 66 ntBASIC1.85□□□□□ -2.11
BRF1Q92994 U6.90-201ENST00000614007 104 ntBASIC1.85□□□□□ -2.11
BRF1Q92994 AL662814.1-201ENST00000617364 121 ntBASIC1.85□□□□□ -2.11
BRF1Q92994 U6.70-201ENST00000620287 104 ntBASIC1.85□□□□□ -2.11
BRF1Q92994 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.84□□□□□ -2.11
BRF1Q92994 Y_RNA.107-201ENST00000363190 121 ntBASIC1.84□□□□□ -2.11
BRF1Q92994 RNY1P13-201ENST00000365030 105 ntBASIC1.84□□□□□ -2.11
BRF1Q92994 RNA5SP190-201ENST00000365222 118 ntBASIC1.84□□□□□ -2.11
BRF1Q92994 RNY4P30-201ENST00000410216 95 ntBASIC1.84□□□□□ -2.11
BRF1Q92994 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.84□□□□□ -2.11
BRF1Q92994 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.84□□□□□ -2.11
BRF1Q92994 AC141846.1-201ENST00000568348 142 ntBASIC1.84□□□□□ -2.11
BRF1Q92994 MIR3937-201ENST00000580135 106 ntBASIC1.84□□□□□ -2.11
BRF1Q92994 AL442128.1-201ENST00000615151 90 ntBASIC1.84□□□□□ -2.11
BRF1Q92994 AL512310.12-203ENST00000640543 90 ntBASIC1.84□□□□□ -2.11
BRF1Q92994 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.84□□□□□ -2.11
BRF1Q92994 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
BRF1Q92994 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
BRF1Q92994 RNA5SP264-201ENST00000363115 107 ntBASIC1.83□□□□□ -2.12
BRF1Q92994 MIR934-201ENST00000401241 83 ntBASIC1.83□□□□□ -2.12
BRF1Q92994 MIR1185-1-201ENST00000408598 86 ntBASIC1.83□□□□□ -2.12
BRF1Q92994 RNA5SP237-201ENST00000410414 113 ntBASIC1.83□□□□□ -2.12
BRF1Q92994 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.83□□□□□ -2.12
BRF1Q92994 SNORD13-201ENST00000459299 104 ntBASIC1.83□□□□□ -2.12
BRF1Q92994 AC108729.3-201ENST00000513484 108 ntBASIC1.83□□□□□ -2.12
BRF1Q92994 RNU6-165P-201ENST00000517170 99 ntBASIC1.83□□□□□ -2.12
BRF1Q92994 AC019176.1-201ENST00000518519 225 ntBASIC1.83□□□□□ -2.12
BRF1Q92994 MIR377-201ENST00000362145 69 ntBASIC1.82□□□□□ -2.12
BRF1Q92994 RNU6-1237P-201ENST00000384777 107 ntBASIC1.82□□□□□ -2.12
BRF1Q92994 MIR1323-201ENST00000408090 73 ntBASIC1.82□□□□□ -2.12
BRF1Q92994 AL512310.8-201ENST00000550183 120 ntBASIC1.82□□□□□ -2.12
BRF1Q92994 AP000753.3-201ENST00000604083 169 ntBASIC1.82□□□□□ -2.12
BRF1Q92994 BX248123.2-201ENST00000606318 124 ntBASIC1.82□□□□□ -2.12
BRF1Q92994 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.82□□□□□ -2.12
BRF1Q92994 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
BRF1Q92994 RNU6-949P-201ENST00000384040 107 ntBASIC1.81□□□□□ -2.12
BRF1Q92994 MIR588-201ENST00000384900 83 ntBASIC1.81□□□□□ -2.12
BRF1Q92994 RNU6-1307P-201ENST00000391012 103 ntBASIC1.81□□□□□ -2.12
BRF1Q92994 RNU6-613P-201ENST00000410412 108 ntBASIC1.81□□□□□ -2.12
BRF1Q92994 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.81□□□□□ -2.12
BRF1Q92994 UBL5P1-201ENST00000507979 193 ntBASIC1.81□□□□□ -2.12
BRF1Q92994 AC006254.2-201ENST00000603259 279 ntBASIC1.81□□□□□ -2.12
BRF1Q92994 AC096720.1-201ENST00000604441 183 ntBASIC1.81□□□□□ -2.12
BRF1Q92994 MIR6516-201ENST00000630554 81 ntBASIC1.81□□□□□ -2.12
BRF1Q92994 MIR103A2-201ENST00000362154 78 ntBASIC1.8□□□□□ -2.12
BRF1Q92994 SNORD45B-201ENST00000364617 72 ntBASIC1.8□□□□□ -2.12
BRF1Q92994 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
BRF1Q92994 MIR764-201ENST00000390811 85 ntBASIC1.8□□□□□ -2.12
BRF1Q92994 RNU6-1321P-201ENST00000390905 107 ntBASIC1.8□□□□□ -2.12
BRF1Q92994 RNU6-1054P-201ENST00000411293 104 ntBASIC1.8□□□□□ -2.12
BRF1Q92994 RNU6-1006P-201ENST00000516998 103 ntBASIC1.8□□□□□ -2.12
BRF1Q92994 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.8□□□□□ -2.12
BRF1Q92994 MIR6740-201ENST00000618268 113 ntBASIC1.8□□□□□ -2.12
BRF1Q92994 RNU6-170P-201ENST00000362832 104 ntBASIC1.79□□□□□ -2.12
BRF1Q92994 RNU6-580P-201ENST00000365159 107 ntBASIC1.79□□□□□ -2.12
BRF1Q92994 Y_RNA.448-201ENST00000384185 108 ntBASIC1.79□□□□□ -2.12
BRF1Q92994 MIR320A-201ENST00000385302 82 ntBASIC1.79□□□□□ -2.12
BRF1Q92994 AC004941.2-201ENST00000427009 228 ntBASIC1.79□□□□□ -2.12
BRF1Q92994 MIR4439-201ENST00000583746 80 ntBASIC1.79□□□□□ -2.12
BRF1Q92994 AC012531.4-201ENST00000616509 177 ntBASIC1.79□□□□□ -2.12
BRF1Q92994 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
BRF1Q92994 Y_RNA.95-201ENST00000363079 95 ntBASIC1.78□□□□□ -2.12
BRF1Q92994 Y_RNA.98-201ENST00000363109 102 ntBASIC1.78□□□□□ -2.12
BRF1Q92994 SNORD38.1-201ENST00000363863 68 ntBASIC1.78□□□□□ -2.12
BRF1Q92994 MIR488-201ENST00000365739 83 ntBASIC1.78□□□□□ -2.12
BRF1Q92994 MIR1304-201ENST00000408243 91 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms