Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 RNU6-1123P-201ENST00000362347 106 ntBASIC2.66□□□□□ -1.98
HPS1Q92902 RNA5SP393-201ENST00000363423 117 ntBASIC2.66□□□□□ -1.98
HPS1Q92902 Y_RNA.239-201ENST00000364444 113 ntBASIC2.66□□□□□ -1.98
HPS1Q92902 SNORD115-22-201ENST00000364456 82 ntBASIC2.66□□□□□ -1.98
HPS1Q92902 SNORD116-24-201ENST00000384549 92 ntBASIC2.66□□□□□ -1.98
HPS1Q92902 EIF4BP1-201ENST00000554881 351 ntBASIC2.66□□□□□ -1.98
HPS1Q92902 AC006023.1-201ENST00000603944 259 ntBASIC2.66□□□□□ -1.98
HPS1Q92902 MIR6740-201ENST00000618268 113 ntBASIC2.66□□□□□ -1.98
HPS1Q92902 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HPS1Q92902 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
HPS1Q92902 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
HPS1Q92902 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HPS1Q92902 MIR337-201ENST00000362281 93 ntBASIC2.65□□□□□ -1.99
HPS1Q92902 RNU6-1216P-201ENST00000362590 107 ntBASIC2.65□□□□□ -1.99
HPS1Q92902 RNU1-138P-201ENST00000384093 164 ntBASIC2.65□□□□□ -1.99
HPS1Q92902 RNU1-148P-201ENST00000384472 162 ntBASIC2.65□□□□□ -1.99
HPS1Q92902 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
HPS1Q92902 RPS27P16-201ENST00000425758 201 ntBASIC2.65□□□□□ -1.99
HPS1Q92902 MIR2113-201ENST00000459007 91 ntBASIC2.65□□□□□ -1.99
HPS1Q92902 RNU6-322P-201ENST00000516010 103 ntBASIC2.65□□□□□ -1.99
HPS1Q92902 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.65□□□□□ -1.99
HPS1Q92902 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
HPS1Q92902 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.65□□□□□ -1.99
HPS1Q92902 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
HPS1Q92902 SNORD45.1-201ENST00000363181 77 ntBASIC2.64□□□□□ -1.99
HPS1Q92902 RNU4-58P-201ENST00000363192 141 ntBASIC2.64□□□□□ -1.99
HPS1Q92902 RNU1-91P-201ENST00000364746 163 ntBASIC2.64□□□□□ -1.99
HPS1Q92902 MIR633-201ENST00000384821 98 ntBASIC2.64□□□□□ -1.99
HPS1Q92902 RNU6-1165P-201ENST00000410119 107 ntBASIC2.64□□□□□ -1.99
HPS1Q92902 RN7SL20P-201ENST00000488827 297 ntBASIC2.64□□□□□ -1.99
HPS1Q92902 RNU2-19P-201ENST00000517288 84 ntBASIC2.64□□□□□ -1.99
HPS1Q92902 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
HPS1Q92902 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HPS1Q92902 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
HPS1Q92902 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
HPS1Q92902 Y_RNA.500-201ENST00000384466 111 ntBASIC2.63□□□□□ -1.99
HPS1Q92902 Y_RNA.510-201ENST00000384511 114 ntBASIC2.63□□□□□ -1.99
HPS1Q92902 MIR518A2-201ENST00000384966 87 ntBASIC2.63□□□□□ -1.99
HPS1Q92902 MIR519A1-201ENST00000385257 85 ntBASIC2.63□□□□□ -1.99
HPS1Q92902 MT-TF-201ENST00000387314 71 ntBASIC2.63□□□□□ -1.99
HPS1Q92902 AC097510.1-201ENST00000510945 133 ntBASIC2.63□□□□□ -1.99
HPS1Q92902 RNU6-531P-201ENST00000516694 104 ntBASIC2.63□□□□□ -1.99
HPS1Q92902 MIR4264-201ENST00000583520 66 ntBASIC2.63□□□□□ -1.99
HPS1Q92902 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
HPS1Q92902 U6.81-201ENST00000612550 106 ntBASIC2.63□□□□□ -1.99
HPS1Q92902 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
HPS1Q92902 AC010297.1-201ENST00000623948 149 ntBASIC2.63□□□□□ -1.99
HPS1Q92902 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.63□□□□□ -1.99
HPS1Q92902 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HPS1Q92902 ZNF209P-201ENST00000593450 2304 ntBASIC2.62□□□□□ -1.99
HPS1Q92902 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HPS1Q92902 SNORA71.1-201ENST00000364523 117 ntBASIC2.62□□□□□ -1.99
HPS1Q92902 SNORA44-201ENST00000384584 132 ntBASIC2.62□□□□□ -1.99
HPS1Q92902 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
HPS1Q92902 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.62□□□□□ -1.99
HPS1Q92902 SNORA9.3-201ENST00000516383 129 ntBASIC2.62□□□□□ -1.99
HPS1Q92902 RNU11-2P-201ENST00000516898 142 ntBASIC2.62□□□□□ -1.99
HPS1Q92902 MIR5194-201ENST00000582634 120 ntBASIC2.62□□□□□ -1.99
HPS1Q92902 AP000942.3-201ENST00000603702 160 ntBASIC2.62□□□□□ -1.99
HPS1Q92902 MIR7106-201ENST00000612419 65 ntBASIC2.62□□□□□ -1.99
HPS1Q92902 AC006386.2-201ENST00000624491 75 ntBASIC2.62□□□□□ -1.99
HPS1Q92902 AC012005.1-201ENST00000624575 75 ntBASIC2.62□□□□□ -1.99
HPS1Q92902 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HPS1Q92902 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.61□□□□□ -1.99
HPS1Q92902 SNORD113.1-201ENST00000363280 73 ntBASIC2.61□□□□□ -1.99
HPS1Q92902 SNORA80A-201ENST00000363922 136 ntBASIC2.61□□□□□ -1.99
HPS1Q92902 RNU6-53P-201ENST00000365367 106 ntBASIC2.61□□□□□ -1.99
HPS1Q92902 RNU6-396P-201ENST00000365369 105 ntBASIC2.61□□□□□ -1.99
HPS1Q92902 DEFA7P-201ENST00000382676 285 ntBASIC2.61□□□□□ -1.99
HPS1Q92902 MIR627-201ENST00000384979 97 ntBASIC2.61□□□□□ -1.99
HPS1Q92902 MIR1302-7-201ENST00000408841 72 ntBASIC2.61□□□□□ -1.99
HPS1Q92902 RNA5SP501-201ENST00000410990 112 ntBASIC2.61□□□□□ -1.99
HPS1Q92902 AC105272.1-201ENST00000438604 198 ntBASIC2.61□□□□□ -1.99
HPS1Q92902 AC008885.1-201ENST00000514930 301 ntBASIC2.61□□□□□ -1.99
HPS1Q92902 TRDV1-202ENST00000621643 102 ntBASIC2.61□□□□□ -1.99
HPS1Q92902 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HPS1Q92902 AP006437.1-201ENST00000641440 3685 ntBASIC2.6□□□□□ -1.99
HPS1Q92902 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.6□□□□□ -1.99
HPS1Q92902 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
HPS1Q92902 MIR22-201ENST00000362190 85 ntBASIC2.6□□□□□ -1.99
HPS1Q92902 RNU6-664P-201ENST00000362381 107 ntBASIC2.6□□□□□ -1.99
HPS1Q92902 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.6□□□□□ -1.99
HPS1Q92902 RNU6-977P-201ENST00000516411 103 ntBASIC2.6□□□□□ -1.99
HPS1Q92902 MIR4491-201ENST00000581087 68 ntBASIC2.6□□□□□ -1.99
HPS1Q92902 MIR4696-201ENST00000581431 70 ntBASIC2.6□□□□□ -1.99
HPS1Q92902 MIR3140-201ENST00000583685 90 ntBASIC2.6□□□□□ -1.99
HPS1Q92902 AC069503.3-201ENST00000618674 145 ntBASIC2.6□□□□□ -1.99
HPS1Q92902 FO624990.1-201ENST00000636373 85 ntBASIC2.6□□□□□ -1.99
HPS1Q92902 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.6□□□□□ -1.99
HPS1Q92902 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
HPS1Q92902 SNORA24B-201ENST00000384176 131 ntBASIC2.59□□□□□ -1.99
HPS1Q92902 MT-TN-201ENST00000387400 73 ntBASIC2.59□□□□□ -1.99
HPS1Q92902 RNU6-360P-201ENST00000390944 104 ntBASIC2.59□□□□□ -1.99
HPS1Q92902 SNORD111.1-201ENST00000516421 86 ntBASIC2.59□□□□□ -1.99
HPS1Q92902 SNORA25.16-201ENST00000516741 121 ntBASIC2.59□□□□□ -1.99
HPS1Q92902 MIR4446-201ENST00000578505 67 ntBASIC2.59□□□□□ -1.99
HPS1Q92902 MIR5089-201ENST00000580047 84 ntBASIC2.59□□□□□ -1.99
HPS1Q92902 AL049779.4-201ENST00000604500 156 ntBASIC2.59□□□□□ -1.99
HPS1Q92902 MIR6852-201ENST00000621699 66 ntBASIC2.59□□□□□ -1.99
HPS1Q92902 RNU6-1260P-201ENST00000362944 107 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 228.8 ms