Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 Y_RNA.286-201ENST00000364813 102 ntBASIC-1□□□□□ -2.57
TOPBP1Q92547 Y_RNA.323-201ENST00000365157 109 ntBASIC-1□□□□□ -2.57
TOPBP1Q92547 PMCHL1-202ENST00000423102 261 ntBASIC-1□□□□□ -2.57
TOPBP1Q92547 U8.20-201ENST00000459445 131 ntBASIC-1□□□□□ -2.57
TOPBP1Q92547 Y_RNA.688-201ENST00000516565 95 ntBASIC-1□□□□□ -2.57
TOPBP1Q92547 RPS29P30-201ENST00000600975 111 ntBASIC-1□□□□□ -2.57
TOPBP1Q92547 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.01□□□□□ -2.57
TOPBP1Q92547 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.01□□□□□ -2.57
TOPBP1Q92547 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.01□□□□□ -2.57
TOPBP1Q92547 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.01□□□□□ -2.57
TOPBP1Q92547 RNY1P7-201ENST00000384743 110 ntBASIC-1.01□□□□□ -2.57
TOPBP1Q92547 RNU6-507P-201ENST00000516045 100 ntBASIC-1.01□□□□□ -2.57
TOPBP1Q92547 RNA5SP153-201ENST00000516498 76 ntBASIC-1.01□□□□□ -2.57
TOPBP1Q92547 RNU7-30P-201ENST00000516835 62 ntBASIC-1.01□□□□□ -2.57
TOPBP1Q92547 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.01□□□□□ -2.57
TOPBP1Q92547 C8orf59P2-201ENST00000603441 271 ntBASIC-1.01□□□□□ -2.57
TOPBP1Q92547 MIR376A2-201ENST00000636782 80 ntBASIC-1.01□□□□□ -2.57
TOPBP1Q92547 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.02□□□□□ -2.57
TOPBP1Q92547 RNY1P2-201ENST00000364820 117 ntBASIC-1.02□□□□□ -2.57
TOPBP1Q92547 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.02□□□□□ -2.57
TOPBP1Q92547 RNU6-890P-201ENST00000384121 107 ntBASIC-1.02□□□□□ -2.57
TOPBP1Q92547 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.02□□□□□ -2.57
TOPBP1Q92547 RNU6-699P-201ENST00000517081 110 ntBASIC-1.02□□□□□ -2.57
TOPBP1Q92547 RNA5SP169-201ENST00000517268 117 ntBASIC-1.02□□□□□ -2.57
TOPBP1Q92547 YWHAEP2-201ENST00000580066 112 ntBASIC-1.02□□□□□ -2.57
TOPBP1Q92547 MIR4473-201ENST00000583731 91 ntBASIC-1.02□□□□□ -2.57
TOPBP1Q92547 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.03□□□□□ -2.57
TOPBP1Q92547 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.03□□□□□ -2.57
TOPBP1Q92547 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.03□□□□□ -2.57
TOPBP1Q92547 RNU6-175P-201ENST00000516896 107 ntBASIC-1.03□□□□□ -2.57
TOPBP1Q92547 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.03□□□□□ -2.57
TOPBP1Q92547 MIR4500-201ENST00000579472 76 ntBASIC-1.03□□□□□ -2.57
TOPBP1Q92547 MIR3129-201ENST00000581095 76 ntBASIC-1.03□□□□□ -2.57
TOPBP1Q92547 AC069503.3-201ENST00000618674 145 ntBASIC-1.03□□□□□ -2.57
TOPBP1Q92547 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.04□□□□□ -2.58
TOPBP1Q92547 RNY4P27-201ENST00000363341 96 ntBASIC-1.04□□□□□ -2.58
TOPBP1Q92547 RNU6-484P-201ENST00000384016 107 ntBASIC-1.04□□□□□ -2.58
TOPBP1Q92547 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.04□□□□□ -2.58
TOPBP1Q92547 MIR526A2-201ENST00000390198 65 ntBASIC-1.04□□□□□ -2.58
TOPBP1Q92547 AC021146.6-201ENST00000514659 117 ntBASIC-1.04□□□□□ -2.58
TOPBP1Q92547 MIR4280-201ENST00000582178 76 ntBASIC-1.04□□□□□ -2.58
TOPBP1Q92547 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.04□□□□□ -2.58
TOPBP1Q92547 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.05□□□□□ -2.58
TOPBP1Q92547 RNU4-10P-201ENST00000364383 140 ntBASIC-1.05□□□□□ -2.58
TOPBP1Q92547 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.05□□□□□ -2.58
TOPBP1Q92547 AC040926.1-201ENST00000530195 238 ntBASIC-1.05□□□□□ -2.58
TOPBP1Q92547 MIR5197-201ENST00000583721 112 ntBASIC-1.05□□□□□ -2.58
TOPBP1Q92547 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.05□□□□□ -2.58
TOPBP1Q92547 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.05□□□□□ -2.58
TOPBP1Q92547 RNU6-901P-201ENST00000384593 106 ntBASIC-1.05□□□□□ -2.58
TOPBP1Q92547 SNORA53-201ENST00000391141 249 ntBASIC-1.05□□□□□ -2.58
TOPBP1Q92547 RNU6-370P-201ENST00000411008 104 ntBASIC-1.05□□□□□ -2.58
TOPBP1Q92547 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-1.05□□□□□ -2.58
TOPBP1Q92547 RNU7-13P-201ENST00000516413 62 ntBASIC-1.05□□□□□ -2.58
TOPBP1Q92547 RNA5SP33-201ENST00000516687 98 ntBASIC-1.05□□□□□ -2.58
TOPBP1Q92547 MIR3165-201ENST00000579874 75 ntBASIC-1.05□□□□□ -2.58
TOPBP1Q92547 MIR4324-201ENST00000584846 72 ntBASIC-1.05□□□□□ -2.58
TOPBP1Q92547 AC006006.1-201ENST00000603082 144 ntBASIC-1.05□□□□□ -2.58
TOPBP1Q92547 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.06□□□□□ -2.58
TOPBP1Q92547 SNORD114-10-201ENST00000363409 72 ntBASIC-1.06□□□□□ -2.58
TOPBP1Q92547 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.06□□□□□ -2.58
TOPBP1Q92547 AC103591.3-201ENST00000608684 209 ntBASIC-1.06□□□□□ -2.58
TOPBP1Q92547 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.06□□□□□ -2.58
TOPBP1Q92547 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.07□□□□□ -2.58
TOPBP1Q92547 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.07□□□□□ -2.58
TOPBP1Q92547 MIR9-2-201ENST00000384838 87 ntBASIC-1.07□□□□□ -2.58
TOPBP1Q92547 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
TOPBP1Q92547 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.07□□□□□ -2.58
TOPBP1Q92547 Y_RNA.653-201ENST00000459091 95 ntBASIC-1.07□□□□□ -2.58
TOPBP1Q92547 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.07□□□□□ -2.58
TOPBP1Q92547 SNORD67.1-201ENST00000516618 108 ntBASIC-1.07□□□□□ -2.58
TOPBP1Q92547 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.08□□□□□ -2.58
TOPBP1Q92547 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.08□□□□□ -2.58
TOPBP1Q92547 SNORD116-1-201ENST00000384335 95 ntBASIC-1.08□□□□□ -2.58
TOPBP1Q92547 RNU6-900P-201ENST00000384498 102 ntBASIC-1.08□□□□□ -2.58
TOPBP1Q92547 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.08□□□□□ -2.58
TOPBP1Q92547 AL603914.1-201ENST00000401964 204 ntBASIC-1.08□□□□□ -2.58
TOPBP1Q92547 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.08□□□□□ -2.58
TOPBP1Q92547 AL445193.1-201ENST00000441183 141 ntBASIC-1.08□□□□□ -2.58
TOPBP1Q92547 AC097635.1-201ENST00000450678 155 ntBASIC-1.08□□□□□ -2.58
TOPBP1Q92547 AC024909.2-201ENST00000553035 286 ntBASIC-1.08□□□□□ -2.58
TOPBP1Q92547 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.08□□□□□ -2.58
TOPBP1Q92547 AC098479.1-201ENST00000609225 154 ntBASIC-1.08□□□□□ -2.58
TOPBP1Q92547 MIR4272-201ENST00000635924 64 ntBASIC-1.08□□□□□ -2.58
TOPBP1Q92547 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.09□□□□□ -2.58
TOPBP1Q92547 MIR559-201ENST00000385188 96 ntBASIC-1.09□□□□□ -2.58
TOPBP1Q92547 MT-TT-201ENST00000387460 66 ntBASIC-1.09□□□□□ -2.58
TOPBP1Q92547 RNU7-113P-201ENST00000459273 62 ntBASIC-1.09□□□□□ -2.58
TOPBP1Q92547 RNU6-358P-201ENST00000516564 75 ntBASIC-1.09□□□□□ -2.58
TOPBP1Q92547 AC006504.6-201ENST00000590142 199 ntBASIC-1.09□□□□□ -2.58
TOPBP1Q92547 AC097639.2-201ENST00000603159 172 ntBASIC-1.09□□□□□ -2.58
TOPBP1Q92547 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.1□□□□□ -2.58
TOPBP1Q92547 SNORD113-8-201ENST00000363497 74 ntBASIC-1.1□□□□□ -2.58
TOPBP1Q92547 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.1□□□□□ -2.58
TOPBP1Q92547 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.1□□□□□ -2.58
TOPBP1Q92547 RNU7-137P-201ENST00000516788 62 ntBASIC-1.1□□□□□ -2.58
TOPBP1Q92547 MTND5P40-201ENST00000559945 246 ntBASIC-1.1□□□□□ -2.58
TOPBP1Q92547 snoU18.1-201ENST00000629629 71 ntBASIC-1.1□□□□□ -2.58
TOPBP1Q92547 Y_RNA.194-201ENST00000363985 102 ntBASIC-1.1□□□□□ -2.59
TOPBP1Q92547 RNU4-16P-201ENST00000364737 141 ntBASIC-1.1□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 195.3 ms