Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 RNU4-61P-201ENST00000411243 107 ntBASIC1.29□□□□□ -2.2
RAPGEF4Q8WZA2 snoU13.2-201ENST00000459201 104 ntBASIC1.29□□□□□ -2.2
RAPGEF4Q8WZA2 AC113410.1-201ENST00000505029 247 ntBASIC1.29□□□□□ -2.2
RAPGEF4Q8WZA2 RNU7-123P-201ENST00000515911 60 ntBASIC1.29□□□□□ -2.2
RAPGEF4Q8WZA2 RNU6-406P-201ENST00000516470 107 ntBASIC1.29□□□□□ -2.2
RAPGEF4Q8WZA2 RNU6-789P-201ENST00000517105 102 ntBASIC1.29□□□□□ -2.2
RAPGEF4Q8WZA2 MIR3973-201ENST00000579824 107 ntBASIC1.29□□□□□ -2.2
RAPGEF4Q8WZA2 MIR6857-201ENST00000613267 93 ntBASIC1.29□□□□□ -2.2
RAPGEF4Q8WZA2 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
RAPGEF4Q8WZA2 Y_RNA.171-201ENST00000363760 102 ntBASIC1.28□□□□□ -2.2
RAPGEF4Q8WZA2 RNU6-342P-201ENST00000384521 104 ntBASIC1.28□□□□□ -2.2
RAPGEF4Q8WZA2 Y_RNA.531-201ENST00000384589 121 ntBASIC1.28□□□□□ -2.2
RAPGEF4Q8WZA2 MIR19B1-201ENST00000384829 87 ntBASIC1.28□□□□□ -2.2
RAPGEF4Q8WZA2 MIR563-201ENST00000385080 79 ntBASIC1.28□□□□□ -2.2
RAPGEF4Q8WZA2 SNORD12C-201ENST00000386307 89 ntBASIC1.28□□□□□ -2.2
RAPGEF4Q8WZA2 MIR1285-1-201ENST00000408593 84 ntBASIC1.28□□□□□ -2.2
RAPGEF4Q8WZA2 AC036111.3-201ENST00000526389 112 ntBASIC1.28□□□□□ -2.2
RAPGEF4Q8WZA2 AC004812.1-201ENST00000540773 146 ntBASIC1.28□□□□□ -2.2
RAPGEF4Q8WZA2 RNU6-235P-201ENST00000362644 107 ntBASIC1.27□□□□□ -2.21
RAPGEF4Q8WZA2 SNORD114-26-201ENST00000363543 72 ntBASIC1.27□□□□□ -2.21
RAPGEF4Q8WZA2 SNORD113.3-201ENST00000364630 78 ntBASIC1.27□□□□□ -2.21
RAPGEF4Q8WZA2 SNORA25.8-201ENST00000364831 128 ntBASIC1.27□□□□□ -2.21
RAPGEF4Q8WZA2 Y_RNA.330-201ENST00000365230 109 ntBASIC1.27□□□□□ -2.21
RAPGEF4Q8WZA2 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.27□□□□□ -2.21
RAPGEF4Q8WZA2 RNA5SP136-201ENST00000410906 107 ntBASIC1.27□□□□□ -2.21
RAPGEF4Q8WZA2 MRPL35P3-201ENST00000421557 364 ntBASIC1.27□□□□□ -2.21
RAPGEF4Q8WZA2 AL512326.2-201ENST00000426359 151 ntBASIC1.27□□□□□ -2.21
RAPGEF4Q8WZA2 RNU7-113P-201ENST00000459273 62 ntBASIC1.27□□□□□ -2.21
RAPGEF4Q8WZA2 RNY4P20-201ENST00000516678 93 ntBASIC1.27□□□□□ -2.21
RAPGEF4Q8WZA2 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.27□□□□□ -2.21
RAPGEF4Q8WZA2 AC106800.4-201ENST00000614905 153 ntBASIC1.27□□□□□ -2.21
RAPGEF4Q8WZA2 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.27□□□□□ -2.21
RAPGEF4Q8WZA2 Y_RNA.71-201ENST00000362892 104 ntBASIC1.26□□□□□ -2.21
RAPGEF4Q8WZA2 SNORD58C-201ENST00000365223 64 ntBASIC1.26□□□□□ -2.21
RAPGEF4Q8WZA2 SNORD111-201ENST00000408139 94 ntBASIC1.26□□□□□ -2.21
RAPGEF4Q8WZA2 RNA5SP95-201ENST00000410319 137 ntBASIC1.26□□□□□ -2.21
RAPGEF4Q8WZA2 AC063976.4-201ENST00000421971 163 ntBASIC1.26□□□□□ -2.21
RAPGEF4Q8WZA2 AC002429.1-201ENST00000437672 148 ntBASIC1.26□□□□□ -2.21
RAPGEF4Q8WZA2 RNU6-781P-201ENST00000516377 101 ntBASIC1.26□□□□□ -2.21
RAPGEF4Q8WZA2 CYP3A137P-201ENST00000562436 69 ntBASIC1.26□□□□□ -2.21
RAPGEF4Q8WZA2 MIR5000-201ENST00000577717 103 ntBASIC1.26□□□□□ -2.21
RAPGEF4Q8WZA2 MIR6740-201ENST00000618268 113 ntBASIC1.26□□□□□ -2.21
RAPGEF4Q8WZA2 AC008163.1-202ENST00000636004 2889 ntBASIC1.25□□□□□ -2.21
RAPGEF4Q8WZA2 SNORD116-14-201ENST00000383894 92 ntBASIC1.25□□□□□ -2.21
RAPGEF4Q8WZA2 SNORD116-17-201ENST00000383929 92 ntBASIC1.25□□□□□ -2.21
RAPGEF4Q8WZA2 Y_RNA.470-201ENST00000384307 117 ntBASIC1.25□□□□□ -2.21
RAPGEF4Q8WZA2 SNORD116-15-201ENST00000384445 92 ntBASIC1.25□□□□□ -2.21
RAPGEF4Q8WZA2 RNU6-939P-201ENST00000384634 107 ntBASIC1.25□□□□□ -2.21
RAPGEF4Q8WZA2 SNORD116-19-201ENST00000384729 92 ntBASIC1.25□□□□□ -2.21
RAPGEF4Q8WZA2 MIR588-201ENST00000384900 83 ntBASIC1.25□□□□□ -2.21
RAPGEF4Q8WZA2 RNU6-205P-201ENST00000390858 107 ntBASIC1.25□□□□□ -2.21
RAPGEF4Q8WZA2 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.25□□□□□ -2.21
RAPGEF4Q8WZA2 RNU7-62P-201ENST00000458856 62 ntBASIC1.25□□□□□ -2.21
RAPGEF4Q8WZA2 RNA5SP436-201ENST00000516020 115 ntBASIC1.25□□□□□ -2.21
RAPGEF4Q8WZA2 RNU6-659P-201ENST00000516454 104 ntBASIC1.25□□□□□ -2.21
RAPGEF4Q8WZA2 Y_RNA.712-201ENST00000517011 92 ntBASIC1.25□□□□□ -2.21
RAPGEF4Q8WZA2 SNORA2B-201ENST00000384583 137 ntBASIC1.24□□□□□ -2.21
RAPGEF4Q8WZA2 RNU6-772P-201ENST00000516042 105 ntBASIC1.24□□□□□ -2.21
RAPGEF4Q8WZA2 RNU6-1234P-201ENST00000516877 103 ntBASIC1.24□□□□□ -2.21
RAPGEF4Q8WZA2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
RAPGEF4Q8WZA2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.23□□□□□ -2.21
RAPGEF4Q8WZA2 Y_RNA.127-201ENST00000363386 109 ntBASIC1.23□□□□□ -2.21
RAPGEF4Q8WZA2 RNU1-124P-201ENST00000363861 145 ntBASIC1.23□□□□□ -2.21
RAPGEF4Q8WZA2 Y_RNA.299-201ENST00000364973 94 ntBASIC1.23□□□□□ -2.21
RAPGEF4Q8WZA2 RNU7-107P-201ENST00000459121 61 ntBASIC1.23□□□□□ -2.21
RAPGEF4Q8WZA2 COX6CP6-201ENST00000490840 228 ntBASIC1.23□□□□□ -2.21
RAPGEF4Q8WZA2 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.23□□□□□ -2.21
RAPGEF4Q8WZA2 AC012676.2-201ENST00000619258 186 ntBASIC1.23□□□□□ -2.21
RAPGEF4Q8WZA2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
RAPGEF4Q8WZA2 Y_RNA.198-201ENST00000364013 98 ntBASIC1.22□□□□□ -2.21
RAPGEF4Q8WZA2 RNU6-1104P-201ENST00000384723 104 ntBASIC1.22□□□□□ -2.21
RAPGEF4Q8WZA2 RNU6-1165P-201ENST00000410119 107 ntBASIC1.22□□□□□ -2.21
RAPGEF4Q8WZA2 RNU6-1086P-201ENST00000410930 100 ntBASIC1.22□□□□□ -2.21
RAPGEF4Q8WZA2 RPS29P28-201ENST00000446439 141 ntBASIC1.22□□□□□ -2.21
RAPGEF4Q8WZA2 RNA5SP33-201ENST00000516687 98 ntBASIC1.22□□□□□ -2.21
RAPGEF4Q8WZA2 RNA5SP404-201ENST00000517118 132 ntBASIC1.22□□□□□ -2.21
RAPGEF4Q8WZA2 RNU7-35P-201ENST00000517174 62 ntBASIC1.22□□□□□ -2.21
RAPGEF4Q8WZA2 AL662814.1-201ENST00000617364 121 ntBASIC1.22□□□□□ -2.21
RAPGEF4Q8WZA2 MIR3914-2-201ENST00000637339 95 ntBASIC1.22□□□□□ -2.21
RAPGEF4Q8WZA2 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
RAPGEF4Q8WZA2 MIR30D-201ENST00000362283 70 ntBASIC1.21□□□□□ -2.22
RAPGEF4Q8WZA2 SNORA18-201ENST00000384416 132 ntBASIC1.21□□□□□ -2.22
RAPGEF4Q8WZA2 RNU6-1117P-201ENST00000384525 104 ntBASIC1.21□□□□□ -2.22
RAPGEF4Q8WZA2 MIR618-201ENST00000385287 98 ntBASIC1.21□□□□□ -2.22
RAPGEF4Q8WZA2 MT-TF-201ENST00000387314 71 ntBASIC1.21□□□□□ -2.22
RAPGEF4Q8WZA2 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
RAPGEF4Q8WZA2 MIR1263-201ENST00000408324 86 ntBASIC1.21□□□□□ -2.22
RAPGEF4Q8WZA2 AC008267.6-201ENST00000441664 139 ntBASIC1.21□□□□□ -2.22
RAPGEF4Q8WZA2 MIR18B-201ENST00000454574 71 ntBASIC1.21□□□□□ -2.22
RAPGEF4Q8WZA2 RNU6-1061P-201ENST00000516530 99 ntBASIC1.21□□□□□ -2.22
RAPGEF4Q8WZA2 AC022523.2-201ENST00000561045 150 ntBASIC1.21□□□□□ -2.22
RAPGEF4Q8WZA2 AC023827.1-201ENST00000569247 97 ntBASIC1.21□□□□□ -2.22
RAPGEF4Q8WZA2 MIR4698-201ENST00000577795 80 ntBASIC1.21□□□□□ -2.22
RAPGEF4Q8WZA2 AC025166.1-201ENST00000612411 163 ntBASIC1.21□□□□□ -2.22
RAPGEF4Q8WZA2 uc_338.6-201ENST00000613544 171 ntBASIC1.21□□□□□ -2.22
RAPGEF4Q8WZA2 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.21□□□□□ -2.22
RAPGEF4Q8WZA2 Y_RNA.563-201ENST00000384707 108 ntBASIC1.2□□□□□ -2.22
RAPGEF4Q8WZA2 RNU4-69P-201ENST00000410677 143 ntBASIC1.2□□□□□ -2.22
RAPGEF4Q8WZA2 RNU7-40P-201ENST00000516397 64 ntBASIC1.2□□□□□ -2.22
RAPGEF4Q8WZA2 MIR548AE2-201ENST00000583456 67 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms