Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RNA5SP95-201ENST00000410319 137 ntBASIC1.31□□□□□ -2.2
ATG4AQ8WYN0 RNU7-6P-201ENST00000516845 62 ntBASIC1.31□□□□□ -2.2
ATG4AQ8WYN0 RNU1-92P-201ENST00000517017 135 ntBASIC1.31□□□□□ -2.2
ATG4AQ8WYN0 RNU7-35P-201ENST00000517174 62 ntBASIC1.31□□□□□ -2.2
ATG4AQ8WYN0 AC007012.1-201ENST00000567192 175 ntBASIC1.31□□□□□ -2.2
ATG4AQ8WYN0 MIR6129-201ENST00000616087 109 ntBASIC1.31□□□□□ -2.2
ATG4AQ8WYN0 MIR6740-201ENST00000618268 113 ntBASIC1.31□□□□□ -2.2
ATG4AQ8WYN0 Y_RNA.4-201ENST00000362333 112 ntBASIC1.3□□□□□ -2.2
ATG4AQ8WYN0 Y_RNA.168-201ENST00000363740 102 ntBASIC1.3□□□□□ -2.2
ATG4AQ8WYN0 RNU6-580P-201ENST00000365159 107 ntBASIC1.3□□□□□ -2.2
ATG4AQ8WYN0 Y_RNA.330-201ENST00000365230 109 ntBASIC1.3□□□□□ -2.2
ATG4AQ8WYN0 RNU6-429P-201ENST00000384582 108 ntBASIC1.3□□□□□ -2.2
ATG4AQ8WYN0 MIR563-201ENST00000385080 79 ntBASIC1.3□□□□□ -2.2
ATG4AQ8WYN0 RNA5SP237-201ENST00000410414 113 ntBASIC1.3□□□□□ -2.2
ATG4AQ8WYN0 RNU6-1086P-201ENST00000410930 100 ntBASIC1.3□□□□□ -2.2
ATG4AQ8WYN0 AL591704.2-201ENST00000421658 181 ntBASIC1.3□□□□□ -2.2
ATG4AQ8WYN0 RNU7-62P-201ENST00000458856 62 ntBASIC1.3□□□□□ -2.2
ATG4AQ8WYN0 RNU7-95P-201ENST00000459222 64 ntBASIC1.3□□□□□ -2.2
ATG4AQ8WYN0 MIR1270-201ENST00000459320 83 ntBASIC1.3□□□□□ -2.2
ATG4AQ8WYN0 RNU7-21P-201ENST00000459430 62 ntBASIC1.3□□□□□ -2.2
ATG4AQ8WYN0 SNORD79.1-201ENST00000516069 84 ntBASIC1.3□□□□□ -2.2
ATG4AQ8WYN0 MIR4679-2-201ENST00000578358 77 ntBASIC1.3□□□□□ -2.2
ATG4AQ8WYN0 AL662814.1-201ENST00000617364 121 ntBASIC1.3□□□□□ -2.2
ATG4AQ8WYN0 AC087741.2-201ENST00000619415 172 ntBASIC1.3□□□□□ -2.2
ATG4AQ8WYN0 SNORD115-19-201ENST00000363098 82 ntBASIC1.29□□□□□ -2.2
ATG4AQ8WYN0 SNORD115-18-201ENST00000363293 82 ntBASIC1.29□□□□□ -2.2
ATG4AQ8WYN0 SNORD115-17-201ENST00000364612 82 ntBASIC1.29□□□□□ -2.2
ATG4AQ8WYN0 Y_RNA.362-201ENST00000365518 110 ntBASIC1.29□□□□□ -2.2
ATG4AQ8WYN0 RNU6-1237P-201ENST00000384777 107 ntBASIC1.29□□□□□ -2.2
ATG4AQ8WYN0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.29□□□□□ -2.2
ATG4AQ8WYN0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.29□□□□□ -2.2
ATG4AQ8WYN0 SNORA70.22-201ENST00000517160 124 ntBASIC1.29□□□□□ -2.2
ATG4AQ8WYN0 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.29□□□□□ -2.2
ATG4AQ8WYN0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.28□□□□□ -2.2
ATG4AQ8WYN0 Y_RNA.35-201ENST00000362601 101 ntBASIC1.28□□□□□ -2.2
ATG4AQ8WYN0 RNU6-1325P-201ENST00000364905 105 ntBASIC1.28□□□□□ -2.2
ATG4AQ8WYN0 SNORD12-201ENST00000391002 90 ntBASIC1.28□□□□□ -2.2
ATG4AQ8WYN0 SNORA40.6-201ENST00000391153 128 ntBASIC1.28□□□□□ -2.2
ATG4AQ8WYN0 RNU6-1165P-201ENST00000410119 107 ntBASIC1.28□□□□□ -2.2
ATG4AQ8WYN0 AC141846.1-201ENST00000568348 142 ntBASIC1.28□□□□□ -2.2
ATG4AQ8WYN0 MIR3660-201ENST00000584845 100 ntBASIC1.28□□□□□ -2.2
ATG4AQ8WYN0 AL359821.1-201ENST00000605519 182 ntBASIC1.28□□□□□ -2.2
ATG4AQ8WYN0 RNU6-215P-201ENST00000365169 102 ntBASIC1.27□□□□□ -2.21
ATG4AQ8WYN0 Y_RNA.344-201ENST00000365381 112 ntBASIC1.27□□□□□ -2.21
ATG4AQ8WYN0 SNORA2B-201ENST00000384583 137 ntBASIC1.27□□□□□ -2.21
ATG4AQ8WYN0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.27□□□□□ -2.21
ATG4AQ8WYN0 MRPL35P3-201ENST00000421557 364 ntBASIC1.27□□□□□ -2.21
ATG4AQ8WYN0 RNU6-589P-201ENST00000516485 107 ntBASIC1.27□□□□□ -2.21
ATG4AQ8WYN0 AL035470.1-201ENST00000622571 220 ntBASIC1.27□□□□□ -2.21
ATG4AQ8WYN0 MIR337-201ENST00000362281 93 ntBASIC1.26□□□□□ -2.21
ATG4AQ8WYN0 RNA5SP327-201ENST00000362494 101 ntBASIC1.26□□□□□ -2.21
ATG4AQ8WYN0 SNORD113.3-201ENST00000364630 78 ntBASIC1.26□□□□□ -2.21
ATG4AQ8WYN0 Y_RNA.281-201ENST00000364774 94 ntBASIC1.26□□□□□ -2.21
ATG4AQ8WYN0 SNORD26-201ENST00000384147 75 ntBASIC1.26□□□□□ -2.21
ATG4AQ8WYN0 SNORD20-201ENST00000384550 80 ntBASIC1.26□□□□□ -2.21
ATG4AQ8WYN0 Y_RNA.549-201ENST00000384657 102 ntBASIC1.26□□□□□ -2.21
ATG4AQ8WYN0 RNU6-321P-201ENST00000410912 106 ntBASIC1.26□□□□□ -2.21
ATG4AQ8WYN0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.26□□□□□ -2.21
ATG4AQ8WYN0 RNU7-90P-201ENST00000459216 62 ntBASIC1.26□□□□□ -2.21
ATG4AQ8WYN0 RNU7-79P-201ENST00000516082 62 ntBASIC1.26□□□□□ -2.21
ATG4AQ8WYN0 AC036111.3-201ENST00000526389 112 ntBASIC1.26□□□□□ -2.21
ATG4AQ8WYN0 MIR4781-201ENST00000585250 76 ntBASIC1.26□□□□□ -2.21
ATG4AQ8WYN0 uc_338.6-201ENST00000613544 171 ntBASIC1.26□□□□□ -2.21
ATG4AQ8WYN0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
ATG4AQ8WYN0 MIR30D-201ENST00000362283 70 ntBASIC1.25□□□□□ -2.21
ATG4AQ8WYN0 RNY1P13-201ENST00000365030 105 ntBASIC1.25□□□□□ -2.21
ATG4AQ8WYN0 RNU6-616P-201ENST00000384353 107 ntBASIC1.25□□□□□ -2.21
ATG4AQ8WYN0 SNORA25-201ENST00000384384 134 ntBASIC1.25□□□□□ -2.21
ATG4AQ8WYN0 MT-TF-201ENST00000387314 71 ntBASIC1.25□□□□□ -2.21
ATG4AQ8WYN0 TRMT112P2-201ENST00000512910 132 ntBASIC1.25□□□□□ -2.21
ATG4AQ8WYN0 RNU6-412P-201ENST00000516434 106 ntBASIC1.25□□□□□ -2.21
ATG4AQ8WYN0 MIR4421-201ENST00000578133 69 ntBASIC1.25□□□□□ -2.21
ATG4AQ8WYN0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.25□□□□□ -2.21
ATG4AQ8WYN0 FAM71BP1-201ENST00000604431 523 ntBASIC1.25□□□□□ -2.21
ATG4AQ8WYN0 AC012676.2-201ENST00000619258 186 ntBASIC1.25□□□□□ -2.21
ATG4AQ8WYN0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.25□□□□□ -2.21
ATG4AQ8WYN0 AL589743.1-201ENST00000551932 2712 ntBASIC1.25□□□□□ -2.21
ATG4AQ8WYN0 RNY1P10-201ENST00000363268 113 ntBASIC1.24□□□□□ -2.21
ATG4AQ8WYN0 MIR222-201ENST00000384992 110 ntBASIC1.24□□□□□ -2.21
ATG4AQ8WYN0 MIR150-201ENST00000385048 84 ntBASIC1.24□□□□□ -2.21
ATG4AQ8WYN0 SNORD111-201ENST00000408139 94 ntBASIC1.24□□□□□ -2.21
ATG4AQ8WYN0 RPL39P34-201ENST00000477141 156 ntBASIC1.24□□□□□ -2.21
ATG4AQ8WYN0 RNU6-919P-201ENST00000516731 104 ntBASIC1.24□□□□□ -2.21
ATG4AQ8WYN0 Y_RNA.709-201ENST00000516952 92 ntBASIC1.24□□□□□ -2.21
ATG4AQ8WYN0 AC023827.1-201ENST00000569247 97 ntBASIC1.24□□□□□ -2.21
ATG4AQ8WYN0 SNORA4-201ENST00000584302 138 ntBASIC1.24□□□□□ -2.21
ATG4AQ8WYN0 Y_RNA.773-201ENST00000607168 90 ntBASIC1.24□□□□□ -2.21
ATG4AQ8WYN0 AC106800.4-201ENST00000614905 153 ntBASIC1.24□□□□□ -2.21
ATG4AQ8WYN0 AC008163.1-202ENST00000636004 2889 ntBASIC1.23□□□□□ -2.21
ATG4AQ8WYN0 Y_RNA.85-201ENST00000363014 111 ntBASIC1.23□□□□□ -2.21
ATG4AQ8WYN0 SNORA63.5-201ENST00000363548 123 ntBASIC1.23□□□□□ -2.21
ATG4AQ8WYN0 SNORA7.1-201ENST00000363750 139 ntBASIC1.23□□□□□ -2.21
ATG4AQ8WYN0 RNU6-949P-201ENST00000384040 107 ntBASIC1.23□□□□□ -2.21
ATG4AQ8WYN0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
ATG4AQ8WYN0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.23□□□□□ -2.21
ATG4AQ8WYN0 AC063976.4-201ENST00000421971 163 ntBASIC1.23□□□□□ -2.21
ATG4AQ8WYN0 MIR18B-201ENST00000454574 71 ntBASIC1.23□□□□□ -2.21
ATG4AQ8WYN0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.23□□□□□ -2.21
ATG4AQ8WYN0 SNORD67.1-201ENST00000516618 108 ntBASIC1.23□□□□□ -2.21
ATG4AQ8WYN0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms