Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.86□□□□□ -2.27
RAB40AQ8WXH6 MIR96-201ENST00000362288 78 ntBASIC0.85□□□□□ -2.27
RAB40AQ8WXH6 RNU6-508P-201ENST00000363231 103 ntBASIC0.85□□□□□ -2.27
RAB40AQ8WXH6 SNORD114-27-201ENST00000363766 70 ntBASIC0.85□□□□□ -2.27
RAB40AQ8WXH6 RNU6-342P-201ENST00000384521 104 ntBASIC0.85□□□□□ -2.27
RAB40AQ8WXH6 RNU7-164P-201ENST00000459221 62 ntBASIC0.85□□□□□ -2.27
RAB40AQ8WXH6 Y_RNA.224-201ENST00000364308 111 ntBASIC0.84□□□□□ -2.27
RAB40AQ8WXH6 SNORD114-22-201ENST00000365423 72 ntBASIC0.84□□□□□ -2.27
RAB40AQ8WXH6 RNU6-364P-201ENST00000384387 107 ntBASIC0.84□□□□□ -2.27
RAB40AQ8WXH6 MIR520H-201ENST00000385126 88 ntBASIC0.84□□□□□ -2.27
RAB40AQ8WXH6 MIR125B2-201ENST00000385128 89 ntBASIC0.84□□□□□ -2.27
RAB40AQ8WXH6 MIR938-201ENST00000401216 83 ntBASIC0.84□□□□□ -2.27
RAB40AQ8WXH6 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.84□□□□□ -2.27
RAB40AQ8WXH6 Y_RNA.692-201ENST00000516627 105 ntBASIC0.84□□□□□ -2.27
RAB40AQ8WXH6 RNA5SP33-201ENST00000516687 98 ntBASIC0.84□□□□□ -2.27
RAB40AQ8WXH6 AP001328.1-201ENST00000528550 176 ntBASIC0.84□□□□□ -2.27
RAB40AQ8WXH6 AC211469.2-201ENST00000605461 205 ntBASIC0.84□□□□□ -2.27
RAB40AQ8WXH6 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.84□□□□□ -2.27
RAB40AQ8WXH6 Y_RNA.170-201ENST00000363746 110 ntBASIC0.83□□□□□ -2.28
RAB40AQ8WXH6 RNU4-38P-201ENST00000364472 129 ntBASIC0.83□□□□□ -2.28
RAB40AQ8WXH6 RNU1-93P-201ENST00000364704 169 ntBASIC0.83□□□□□ -2.28
RAB40AQ8WXH6 Y_RNA.366-201ENST00000365540 102 ntBASIC0.83□□□□□ -2.28
RAB40AQ8WXH6 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
RAB40AQ8WXH6 Y_RNA.420-201ENST00000384043 110 ntBASIC0.83□□□□□ -2.28
RAB40AQ8WXH6 RNU6-209P-201ENST00000384118 107 ntBASIC0.83□□□□□ -2.28
RAB40AQ8WXH6 Y_RNA.470-201ENST00000384307 117 ntBASIC0.83□□□□□ -2.28
RAB40AQ8WXH6 MIR605-201ENST00000385078 83 ntBASIC0.83□□□□□ -2.28
RAB40AQ8WXH6 SNORD93-201ENST00000408813 74 ntBASIC0.83□□□□□ -2.28
RAB40AQ8WXH6 RNU6-1086P-201ENST00000410930 100 ntBASIC0.83□□□□□ -2.28
RAB40AQ8WXH6 AL512326.2-201ENST00000426359 151 ntBASIC0.83□□□□□ -2.28
RAB40AQ8WXH6 RNU2-35P-201ENST00000516446 142 ntBASIC0.83□□□□□ -2.28
RAB40AQ8WXH6 RNU6-1212P-201ENST00000517023 104 ntBASIC0.83□□□□□ -2.28
RAB40AQ8WXH6 AC004812.1-201ENST00000540773 146 ntBASIC0.83□□□□□ -2.28
RAB40AQ8WXH6 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
RAB40AQ8WXH6 SNORD115-2-201ENST00000362842 82 ntBASIC0.82□□□□□ -2.28
RAB40AQ8WXH6 SNORD115-20-201ENST00000365099 82 ntBASIC0.82□□□□□ -2.28
RAB40AQ8WXH6 Y_RNA.488-201ENST00000384403 102 ntBASIC0.82□□□□□ -2.28
RAB40AQ8WXH6 Y_RNA.531-201ENST00000384589 121 ntBASIC0.82□□□□□ -2.28
RAB40AQ8WXH6 MIR569-201ENST00000385228 96 ntBASIC0.82□□□□□ -2.28
RAB40AQ8WXH6 RNU1-119P-201ENST00000391122 165 ntBASIC0.82□□□□□ -2.28
RAB40AQ8WXH6 RNU7-123P-201ENST00000515911 60 ntBASIC0.82□□□□□ -2.28
RAB40AQ8WXH6 RNU6-949P-201ENST00000384040 107 ntBASIC0.81□□□□□ -2.28
RAB40AQ8WXH6 PSMC1P5-201ENST00000512850 177 ntBASIC0.81□□□□□ -2.28
RAB40AQ8WXH6 RNU7-200P-201ENST00000516105 62 ntBASIC0.81□□□□□ -2.28
RAB40AQ8WXH6 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.81□□□□□ -2.28
RAB40AQ8WXH6 AC011195.1-201ENST00000578177 177 ntBASIC0.81□□□□□ -2.28
RAB40AQ8WXH6 AL137067.1-201ENST00000615933 120 ntBASIC0.81□□□□□ -2.28
RAB40AQ8WXH6 AP001340.1-201ENST00000624405 217 ntBASIC0.81□□□□□ -2.28
RAB40AQ8WXH6 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
RAB40AQ8WXH6 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
RAB40AQ8WXH6 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
RAB40AQ8WXH6 SNORA32-201ENST00000384072 121 ntBASIC0.8□□□□□ -2.28
RAB40AQ8WXH6 RNU6-447P-201ENST00000410293 104 ntBASIC0.8□□□□□ -2.28
RAB40AQ8WXH6 RNU6-1118P-201ENST00000410382 104 ntBASIC0.8□□□□□ -2.28
RAB40AQ8WXH6 RNU6-1076P-201ENST00000410397 104 ntBASIC0.8□□□□□ -2.28
RAB40AQ8WXH6 RNU6-355P-201ENST00000410427 104 ntBASIC0.8□□□□□ -2.28
RAB40AQ8WXH6 RNU6-791P-201ENST00000410467 104 ntBASIC0.8□□□□□ -2.28
RAB40AQ8WXH6 RNU6-705P-201ENST00000410601 104 ntBASIC0.8□□□□□ -2.28
RAB40AQ8WXH6 RNU6-1100P-201ENST00000410691 104 ntBASIC0.8□□□□□ -2.28
RAB40AQ8WXH6 RNU6-860P-201ENST00000410860 104 ntBASIC0.8□□□□□ -2.28
RAB40AQ8WXH6 RNU4-83P-201ENST00000410863 133 ntBASIC0.8□□□□□ -2.28
RAB40AQ8WXH6 RNU6-1217P-201ENST00000411276 104 ntBASIC0.8□□□□□ -2.28
RAB40AQ8WXH6 RNU6-785P-201ENST00000411324 104 ntBASIC0.8□□□□□ -2.28
RAB40AQ8WXH6 RNU7-56P-201ENST00000458744 62 ntBASIC0.8□□□□□ -2.28
RAB40AQ8WXH6 RNU7-156P-201ENST00000517214 74 ntBASIC0.8□□□□□ -2.28
RAB40AQ8WXH6 MIR6857-201ENST00000613267 93 ntBASIC0.8□□□□□ -2.28
RAB40AQ8WXH6 U6.90-201ENST00000614007 104 ntBASIC0.8□□□□□ -2.28
RAB40AQ8WXH6 U6.70-201ENST00000620287 104 ntBASIC0.8□□□□□ -2.28
RAB40AQ8WXH6 Y_RNA.116-201ENST00000363292 103 ntBASIC0.79□□□□□ -2.28
RAB40AQ8WXH6 Y_RNA.298-201ENST00000364960 107 ntBASIC0.79□□□□□ -2.28
RAB40AQ8WXH6 RNY1P13-201ENST00000365030 105 ntBASIC0.79□□□□□ -2.28
RAB40AQ8WXH6 MIR518E-201ENST00000385252 88 ntBASIC0.79□□□□□ -2.28
RAB40AQ8WXH6 U8.15-201ENST00000390947 134 ntBASIC0.79□□□□□ -2.28
RAB40AQ8WXH6 MIR548I1-201ENST00000408810 149 ntBASIC0.79□□□□□ -2.28
RAB40AQ8WXH6 RNU7-102P-201ENST00000458948 62 ntBASIC0.79□□□□□ -2.28
RAB40AQ8WXH6 RNU7-79P-201ENST00000516082 62 ntBASIC0.79□□□□□ -2.28
RAB40AQ8WXH6 RNU7-35P-201ENST00000517174 62 ntBASIC0.79□□□□□ -2.28
RAB40AQ8WXH6 MIR3121-201ENST00000579680 77 ntBASIC0.79□□□□□ -2.28
RAB40AQ8WXH6 SNORD92-201ENST00000585078 85 ntBASIC0.79□□□□□ -2.28
RAB40AQ8WXH6 AC108081.1-201ENST00000604358 221 ntBASIC0.79□□□□□ -2.28
RAB40AQ8WXH6 MIR520E-201ENST00000384867 87 ntBASIC0.78□□□□□ -2.28
RAB40AQ8WXH6 MIR573-201ENST00000384964 99 ntBASIC0.78□□□□□ -2.28
RAB40AQ8WXH6 MIR532-201ENST00000385025 91 ntBASIC0.78□□□□□ -2.28
RAB40AQ8WXH6 AC244098.3-201ENST00000424803 96 ntBASIC0.78□□□□□ -2.28
RAB40AQ8WXH6 RNU6-426P-201ENST00000516464 97 ntBASIC0.78□□□□□ -2.28
RAB40AQ8WXH6 RNU6-255P-201ENST00000516957 105 ntBASIC0.78□□□□□ -2.28
RAB40AQ8WXH6 MIR548AE2-201ENST00000583456 67 ntBASIC0.78□□□□□ -2.28
RAB40AQ8WXH6 U7.2-201ENST00000607576 63 ntBASIC0.78□□□□□ -2.28
RAB40AQ8WXH6 MIR6767-201ENST00000637302 66 ntBASIC0.78□□□□□ -2.28
RAB40AQ8WXH6 AL589743.1-201ENST00000551932 2712 ntBASIC0.78□□□□□ -2.29
RAB40AQ8WXH6 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
RAB40AQ8WXH6 Y_RNA.299-201ENST00000364973 94 ntBASIC0.77□□□□□ -2.29
RAB40AQ8WXH6 Y_RNA.343-201ENST00000365354 112 ntBASIC0.77□□□□□ -2.29
RAB40AQ8WXH6 RNY4P20-201ENST00000516678 93 ntBASIC0.77□□□□□ -2.29
RAB40AQ8WXH6 MIR4653-201ENST00000585107 83 ntBASIC0.77□□□□□ -2.29
RAB40AQ8WXH6 AL078603.1-201ENST00000603824 313 ntBASIC0.77□□□□□ -2.29
RAB40AQ8WXH6 RNU6-403P-201ENST00000363163 104 ntBASIC0.76□□□□□ -2.29
RAB40AQ8WXH6 Y_RNA.114-201ENST00000363265 113 ntBASIC0.76□□□□□ -2.29
RAB40AQ8WXH6 RNU6-647P-201ENST00000364243 107 ntBASIC0.76□□□□□ -2.29
RAB40AQ8WXH6 RNY1P5-201ENST00000383890 115 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 236.2 ms