Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RNU6-1165P-201ENST00000410119 107 ntBASIC0.32□□□□□ -2.36
SHROOM3Q8TF72 RNU4-43P-201ENST00000410628 137 ntBASIC0.32□□□□□ -2.36
SHROOM3Q8TF72 AC002350.1-201ENST00000490759 375 ntBASIC0.32□□□□□ -2.36
SHROOM3Q8TF72 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.32□□□□□ -2.36
SHROOM3Q8TF72 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.32□□□□□ -2.36
SHROOM3Q8TF72 AC018659.1-201ENST00000551083 169 ntBASIC0.32□□□□□ -2.36
SHROOM3Q8TF72 U6.106-201ENST00000636360 105 ntBASIC0.32□□□□□ -2.36
SHROOM3Q8TF72 RNU6-888P-201ENST00000363010 101 ntBASIC0.32□□□□□ -2.36
SHROOM3Q8TF72 snoU2_19.4-201ENST00000364329 80 ntBASIC0.32□□□□□ -2.36
SHROOM3Q8TF72 SNORD114-15-201ENST00000364687 72 ntBASIC0.32□□□□□ -2.36
SHROOM3Q8TF72 SNORA50A-201ENST00000384225 134 ntBASIC0.32□□□□□ -2.36
SHROOM3Q8TF72 RNU6-535P-201ENST00000384722 107 ntBASIC0.32□□□□□ -2.36
SHROOM3Q8TF72 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
SHROOM3Q8TF72 SNORD93-201ENST00000408813 74 ntBASIC0.32□□□□□ -2.36
SHROOM3Q8TF72 Y_RNA.617-201ENST00000410920 90 ntBASIC0.32□□□□□ -2.36
SHROOM3Q8TF72 RNU7-45P-201ENST00000459460 63 ntBASIC0.32□□□□□ -2.36
SHROOM3Q8TF72 RNA5SP236-201ENST00000516169 116 ntBASIC0.32□□□□□ -2.36
SHROOM3Q8TF72 RNU6-1110P-201ENST00000516462 101 ntBASIC0.32□□□□□ -2.36
SHROOM3Q8TF72 RNU6-1271P-201ENST00000517049 105 ntBASIC0.32□□□□□ -2.36
SHROOM3Q8TF72 AP002392.1-201ENST00000537692 208 ntBASIC0.32□□□□□ -2.36
SHROOM3Q8TF72 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.32□□□□□ -2.36
SHROOM3Q8TF72 AL162730.1-201ENST00000605734 292 ntBASIC0.32□□□□□ -2.36
SHROOM3Q8TF72 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.32□□□□□ -2.36
SHROOM3Q8TF72 MIR6755-201ENST00000619993 66 ntBASIC0.32□□□□□ -2.36
SHROOM3Q8TF72 AC092634.7-201ENST00000621022 103 ntBASIC0.32□□□□□ -2.36
SHROOM3Q8TF72 RNU6-349P-201ENST00000362402 107 ntBASIC0.31□□□□□ -2.36
SHROOM3Q8TF72 Y_RNA.75-201ENST00000362927 97 ntBASIC0.31□□□□□ -2.36
SHROOM3Q8TF72 Y_RNA.83-201ENST00000363005 113 ntBASIC0.31□□□□□ -2.36
SHROOM3Q8TF72 RNU6-945P-201ENST00000383947 107 ntBASIC0.31□□□□□ -2.36
SHROOM3Q8TF72 Y_RNA.489-201ENST00000384410 101 ntBASIC0.31□□□□□ -2.36
SHROOM3Q8TF72 SNORA18-201ENST00000384416 132 ntBASIC0.31□□□□□ -2.36
SHROOM3Q8TF72 RNA5SP237-201ENST00000410414 113 ntBASIC0.31□□□□□ -2.36
SHROOM3Q8TF72 Z95118.1-201ENST00000421372 247 ntBASIC0.31□□□□□ -2.36
SHROOM3Q8TF72 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.31□□□□□ -2.36
SHROOM3Q8TF72 RNU7-156P-201ENST00000517214 74 ntBASIC0.31□□□□□ -2.36
SHROOM3Q8TF72 MIR4308-201ENST00000580634 81 ntBASIC0.31□□□□□ -2.36
SHROOM3Q8TF72 AC141273.2-201ENST00000618989 130 ntBASIC0.31□□□□□ -2.36
SHROOM3Q8TF72 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
SHROOM3Q8TF72 Y_RNA.182-201ENST00000363880 111 ntBASIC0.3□□□□□ -2.36
SHROOM3Q8TF72 RNY4P28-201ENST00000365281 93 ntBASIC0.3□□□□□ -2.36
SHROOM3Q8TF72 RNU6-949P-201ENST00000384040 107 ntBASIC0.3□□□□□ -2.36
SHROOM3Q8TF72 RNU6-110P-201ENST00000384508 104 ntBASIC0.3□□□□□ -2.36
SHROOM3Q8TF72 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.3□□□□□ -2.36
SHROOM3Q8TF72 RNA5SP261-201ENST00000410536 106 ntBASIC0.3□□□□□ -2.36
SHROOM3Q8TF72 RNU7-113P-201ENST00000459273 62 ntBASIC0.3□□□□□ -2.36
SHROOM3Q8TF72 AL136317.1-201ENST00000612653 226 ntBASIC0.3□□□□□ -2.36
SHROOM3Q8TF72 Y_RNA.52-201ENST00000362760 96 ntBASIC0.3□□□□□ -2.36
SHROOM3Q8TF72 Y_RNA.200-201ENST00000364018 102 ntBASIC0.3□□□□□ -2.36
SHROOM3Q8TF72 SNORA20.1-201ENST00000364790 130 ntBASIC0.3□□□□□ -2.36
SHROOM3Q8TF72 Y_RNA.299-201ENST00000364973 94 ntBASIC0.3□□□□□ -2.36
SHROOM3Q8TF72 RNY1P6-201ENST00000384193 109 ntBASIC0.3□□□□□ -2.36
SHROOM3Q8TF72 MIR563-201ENST00000385080 79 ntBASIC0.3□□□□□ -2.36
SHROOM3Q8TF72 RNU6-758P-201ENST00000516292 89 ntBASIC0.3□□□□□ -2.36
SHROOM3Q8TF72 AC133485.4-201ENST00000561835 220 ntBASIC0.3□□□□□ -2.36
SHROOM3Q8TF72 AC138907.4-201ENST00000570107 226 ntBASIC0.3□□□□□ -2.36
SHROOM3Q8TF72 MIR4667-201ENST00000578933 66 ntBASIC0.3□□□□□ -2.36
SHROOM3Q8TF72 AC090897.1-201ENST00000580909 226 ntBASIC0.3□□□□□ -2.36
SHROOM3Q8TF72 SNORD92-201ENST00000585078 85 ntBASIC0.3□□□□□ -2.36
SHROOM3Q8TF72 AL365265.1-201ENST00000621045 234 ntBASIC0.3□□□□□ -2.36
SHROOM3Q8TF72 AC099654.10-201ENST00000640395 161 ntBASIC0.3□□□□□ -2.36
SHROOM3Q8TF72 RNU6-690P-201ENST00000365242 106 ntBASIC0.29□□□□□ -2.36
SHROOM3Q8TF72 RNU4-45P-201ENST00000365469 141 ntBASIC0.29□□□□□ -2.36
SHROOM3Q8TF72 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.29□□□□□ -2.36
SHROOM3Q8TF72 AL512326.2-201ENST00000426359 151 ntBASIC0.29□□□□□ -2.36
SHROOM3Q8TF72 SNORA31.14-201ENST00000516728 116 ntBASIC0.29□□□□□ -2.36
SHROOM3Q8TF72 MIR6717-201ENST00000622747 73 ntBASIC0.29□□□□□ -2.36
SHROOM3Q8TF72 Y_RNA.20-201ENST00000362479 113 ntBASIC0.28□□□□□ -2.36
SHROOM3Q8TF72 RNU4-67P-201ENST00000364569 141 ntBASIC0.28□□□□□ -2.36
SHROOM3Q8TF72 RNU6-47P-201ENST00000383866 107 ntBASIC0.28□□□□□ -2.36
SHROOM3Q8TF72 Y_RNA.470-201ENST00000384307 117 ntBASIC0.28□□□□□ -2.36
SHROOM3Q8TF72 Y_RNA.515-201ENST00000384535 112 ntBASIC0.28□□□□□ -2.36
SHROOM3Q8TF72 Y_RNA.567-201ENST00000384736 106 ntBASIC0.28□□□□□ -2.36
SHROOM3Q8TF72 RNU6-1321P-201ENST00000390905 107 ntBASIC0.28□□□□□ -2.36
SHROOM3Q8TF72 RNU6-918P-201ENST00000391219 106 ntBASIC0.28□□□□□ -2.36
SHROOM3Q8TF72 Y_RNA.618-201ENST00000410949 107 ntBASIC0.28□□□□□ -2.36
SHROOM3Q8TF72 AL121914.1-201ENST00000450188 156 ntBASIC0.28□□□□□ -2.36
SHROOM3Q8TF72 IGLVI-20-201ENST00000519296 130 ntBASIC0.28□□□□□ -2.36
SHROOM3Q8TF72 MIR378D2-201ENST00000580636 98 ntBASIC0.28□□□□□ -2.36
SHROOM3Q8TF72 MIR4491-201ENST00000581087 68 ntBASIC0.28□□□□□ -2.36
SHROOM3Q8TF72 AC078938.1-201ENST00000620993 318 ntBASIC0.28□□□□□ -2.36
SHROOM3Q8TF72 SNORD116-25-201ENST00000516517 92 ntBASIC0.28□□□□□ -2.36
SHROOM3Q8TF72 AC022559.1-201ENST00000520905 205 ntBASIC0.28□□□□□ -2.36
SHROOM3Q8TF72 AC130289.1-201ENST00000577321 73 ntBASIC0.28□□□□□ -2.36
SHROOM3Q8TF72 MIR103A1-201ENST00000362165 78 ntBASIC0.27□□□□□ -2.37
SHROOM3Q8TF72 Y_RNA.121-201ENST00000363309 113 ntBASIC0.27□□□□□ -2.37
SHROOM3Q8TF72 RNU6-379P-201ENST00000363813 104 ntBASIC0.27□□□□□ -2.37
SHROOM3Q8TF72 Y_RNA.357-201ENST00000365487 109 ntBASIC0.27□□□□□ -2.37
SHROOM3Q8TF72 SNORD24-201ENST00000383884 75 ntBASIC0.27□□□□□ -2.37
SHROOM3Q8TF72 Y_RNA.440-201ENST00000384120 114 ntBASIC0.27□□□□□ -2.37
SHROOM3Q8TF72 Y_RNA.454-201ENST00000384224 113 ntBASIC0.27□□□□□ -2.37
SHROOM3Q8TF72 Y_RNA.542-201ENST00000384641 111 ntBASIC0.27□□□□□ -2.37
SHROOM3Q8TF72 MT-TG-201ENST00000387429 68 ntBASIC0.27□□□□□ -2.37
SHROOM3Q8TF72 AC096949.1-201ENST00000412047 152 ntBASIC0.27□□□□□ -2.37
SHROOM3Q8TF72 AC104692.1-201ENST00000472406 90 ntBASIC0.27□□□□□ -2.37
SHROOM3Q8TF72 IGKV1-22-201ENST00000524313 326 ntBASIC0.27□□□□□ -2.37
SHROOM3Q8TF72 AC112693.2-201ENST00000556538 232 ntBASIC0.27□□□□□ -2.37
SHROOM3Q8TF72 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.27□□□□□ -2.37
SHROOM3Q8TF72 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.27□□□□□ -2.37
SHROOM3Q8TF72 U6.109-201ENST00000636749 87 ntBASIC0.27□□□□□ -2.37
SHROOM3Q8TF72 MIR376A2-201ENST00000636782 80 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms