Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL022718.1-201ENST00000412004 84 ntBASIC1.29□□□□□ -2.2
SNED1Q8TER0 AC005908.1-201ENST00000468701 347 ntBASIC1.29□□□□□ -2.2
SNED1Q8TER0 RPL39P34-201ENST00000477141 156 ntBASIC1.29□□□□□ -2.2
SNED1Q8TER0 Y_RNA.677-201ENST00000516401 85 ntBASIC1.29□□□□□ -2.2
SNED1Q8TER0 RNU7-6P-201ENST00000516845 62 ntBASIC1.29□□□□□ -2.2
SNED1Q8TER0 AC022523.2-201ENST00000561045 150 ntBASIC1.29□□□□□ -2.2
SNED1Q8TER0 AC211469.2-201ENST00000605461 205 ntBASIC1.29□□□□□ -2.2
SNED1Q8TER0 AL035470.1-201ENST00000622571 220 ntBASIC1.29□□□□□ -2.2
SNED1Q8TER0 SNORD3E-202ENST00000627253 216 ntBASIC1.29□□□□□ -2.2
SNED1Q8TER0 RNU4-38P-201ENST00000364472 129 ntBASIC1.28□□□□□ -2.2
SNED1Q8TER0 U8.6-201ENST00000364939 135 ntBASIC1.28□□□□□ -2.2
SNED1Q8TER0 RNU6-1113P-201ENST00000384348 107 ntBASIC1.28□□□□□ -2.2
SNED1Q8TER0 RNU6-1067P-201ENST00000384752 107 ntBASIC1.28□□□□□ -2.2
SNED1Q8TER0 RNY4P30-201ENST00000410216 95 ntBASIC1.28□□□□□ -2.2
SNED1Q8TER0 AL512326.2-201ENST00000426359 151 ntBASIC1.28□□□□□ -2.2
SNED1Q8TER0 PGBD4P5-201ENST00000445958 426 ntBASIC1.28□□□□□ -2.2
SNED1Q8TER0 RNU7-45P-201ENST00000459460 63 ntBASIC1.28□□□□□ -2.2
SNED1Q8TER0 AC068339.1-201ENST00000526965 141 ntBASIC1.28□□□□□ -2.2
SNED1Q8TER0 SNORA77B-201ENST00000578179 125 ntBASIC1.28□□□□□ -2.2
SNED1Q8TER0 MIR3152-201ENST00000579801 74 ntBASIC1.28□□□□□ -2.2
SNED1Q8TER0 MIR3163-201ENST00000581592 73 ntBASIC1.28□□□□□ -2.2
SNED1Q8TER0 MIR548AR-201ENST00000582191 57 ntBASIC1.28□□□□□ -2.2
SNED1Q8TER0 AL513423.1-201ENST00000621695 132 ntBASIC1.28□□□□□ -2.2
SNED1Q8TER0 AC021613.1-201ENST00000623880 111 ntBASIC1.28□□□□□ -2.2
SNED1Q8TER0 AC008133.2-201ENST00000624540 351 ntBASIC1.28□□□□□ -2.2
SNED1Q8TER0 Y_RNA.323-201ENST00000365157 109 ntBASIC1.27□□□□□ -2.21
SNED1Q8TER0 Y_RNA.344-201ENST00000365381 112 ntBASIC1.27□□□□□ -2.21
SNED1Q8TER0 Y_RNA.531-201ENST00000384589 121 ntBASIC1.27□□□□□ -2.21
SNED1Q8TER0 MIR548D2-201ENST00000384955 97 ntBASIC1.27□□□□□ -2.21
SNED1Q8TER0 MIR532-201ENST00000385025 91 ntBASIC1.27□□□□□ -2.21
SNED1Q8TER0 MIR660-201ENST00000385235 97 ntBASIC1.27□□□□□ -2.21
SNED1Q8TER0 RNU6-1319P-201ENST00000390855 104 ntBASIC1.27□□□□□ -2.21
SNED1Q8TER0 RNU6-747P-201ENST00000390928 104 ntBASIC1.27□□□□□ -2.21
SNED1Q8TER0 RNU6-241P-201ENST00000391148 104 ntBASIC1.27□□□□□ -2.21
SNED1Q8TER0 RNA5SP144-201ENST00000410846 116 ntBASIC1.27□□□□□ -2.21
SNED1Q8TER0 RNU6-177P-201ENST00000411257 104 ntBASIC1.27□□□□□ -2.21
SNED1Q8TER0 SNORD123-201ENST00000459473 70 ntBASIC1.27□□□□□ -2.21
SNED1Q8TER0 SNORA31.4-201ENST00000516049 129 ntBASIC1.27□□□□□ -2.21
SNED1Q8TER0 Y_RNA.694-201ENST00000516677 117 ntBASIC1.27□□□□□ -2.21
SNED1Q8TER0 AC004812.1-201ENST00000540773 146 ntBASIC1.27□□□□□ -2.21
SNED1Q8TER0 MIR5009-201ENST00000578736 100 ntBASIC1.27□□□□□ -2.21
SNED1Q8TER0 RNU6-94P-201ENST00000607728 107 ntBASIC1.27□□□□□ -2.21
SNED1Q8TER0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.27□□□□□ -2.21
SNED1Q8TER0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.27□□□□□ -2.21
SNED1Q8TER0 RNU6-766P-201ENST00000362478 107 ntBASIC1.26□□□□□ -2.21
SNED1Q8TER0 SNORA70.7-201ENST00000384159 133 ntBASIC1.26□□□□□ -2.21
SNED1Q8TER0 RNU6-893P-201ENST00000458841 100 ntBASIC1.26□□□□□ -2.21
SNED1Q8TER0 AC099513.1-201ENST00000490423 301 ntBASIC1.26□□□□□ -2.21
SNED1Q8TER0 AC079140.2-201ENST00000506193 142 ntBASIC1.26□□□□□ -2.21
SNED1Q8TER0 Y_RNA.681-201ENST00000516445 113 ntBASIC1.26□□□□□ -2.21
SNED1Q8TER0 MIR5582-201ENST00000579697 68 ntBASIC1.26□□□□□ -2.21
SNED1Q8TER0 AC006254.2-201ENST00000603259 279 ntBASIC1.26□□□□□ -2.21
SNED1Q8TER0 SNORD114-21-201ENST00000606412 72 ntBASIC1.26□□□□□ -2.21
SNED1Q8TER0 RNA5SP457-201ENST00000363657 124 ntBASIC1.25□□□□□ -2.21
SNED1Q8TER0 SNORD1A-201ENST00000364968 72 ntBASIC1.25□□□□□ -2.21
SNED1Q8TER0 Y_RNA.328-201ENST00000365208 113 ntBASIC1.25□□□□□ -2.21
SNED1Q8TER0 Y_RNA.433-201ENST00000384089 102 ntBASIC1.25□□□□□ -2.21
SNED1Q8TER0 MIR526A1-201ENST00000384897 85 ntBASIC1.25□□□□□ -2.21
SNED1Q8TER0 SNORD28B-201ENST00000390993 75 ntBASIC1.25□□□□□ -2.21
SNED1Q8TER0 RPL39P25-201ENST00000449384 154 ntBASIC1.25□□□□□ -2.21
SNED1Q8TER0 RPS23P4-201ENST00000487908 423 ntBASIC1.25□□□□□ -2.21
SNED1Q8TER0 RNU7-53P-201ENST00000516705 60 ntBASIC1.25□□□□□ -2.21
SNED1Q8TER0 CYP3A137P-201ENST00000562436 69 ntBASIC1.25□□□□□ -2.21
SNED1Q8TER0 AP001318.4-201ENST00000616637 121 ntBASIC1.25□□□□□ -2.21
SNED1Q8TER0 AC243994.1-201ENST00000618627 109 ntBASIC1.25□□□□□ -2.21
SNED1Q8TER0 AL442644.1-201ENST00000454390 3105 ntBASIC1.25□□□□□ -2.21
SNED1Q8TER0 Y_RNA.171-201ENST00000363760 102 ntBASIC1.24□□□□□ -2.21
SNED1Q8TER0 SNORD26-201ENST00000384147 75 ntBASIC1.24□□□□□ -2.21
SNED1Q8TER0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
SNED1Q8TER0 RNA5SP261-201ENST00000410536 106 ntBASIC1.24□□□□□ -2.21
SNED1Q8TER0 RNU7-113P-201ENST00000459273 62 ntBASIC1.24□□□□□ -2.21
SNED1Q8TER0 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.24□□□□□ -2.21
SNED1Q8TER0 MIR4791-201ENST00000607666 84 ntBASIC1.24□□□□□ -2.21
SNED1Q8TER0 MIR8063-201ENST00000621930 81 ntBASIC1.24□□□□□ -2.21
SNED1Q8TER0 AL162726.3-218ENST00000636401 95 ntBASIC1.24□□□□□ -2.21
SNED1Q8TER0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SNED1Q8TER0 Y_RNA.299-201ENST00000364973 94 ntBASIC1.23□□□□□ -2.21
SNED1Q8TER0 SNORA51.10-201ENST00000384418 136 ntBASIC1.23□□□□□ -2.21
SNED1Q8TER0 MIR1912-201ENST00000410389 80 ntBASIC1.23□□□□□ -2.21
SNED1Q8TER0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.23□□□□□ -2.21
SNED1Q8TER0 RNU2-13P-201ENST00000515909 113 ntBASIC1.23□□□□□ -2.21
SNED1Q8TER0 RNA5SP33-201ENST00000516687 98 ntBASIC1.23□□□□□ -2.21
SNED1Q8TER0 RNU6-1258P-201ENST00000516911 111 ntBASIC1.23□□□□□ -2.21
SNED1Q8TER0 AL513534.2-201ENST00000603836 250 ntBASIC1.23□□□□□ -2.21
SNED1Q8TER0 AC087741.2-201ENST00000619415 172 ntBASIC1.23□□□□□ -2.21
SNED1Q8TER0 MIR4679-1-201ENST00000637619 75 ntBASIC1.23□□□□□ -2.21
SNED1Q8TER0 Y_RNA.348-201ENST00000365403 103 ntBASIC1.23□□□□□ -2.21
SNED1Q8TER0 RNU6-905P-201ENST00000384434 107 ntBASIC1.23□□□□□ -2.21
SNED1Q8TER0 Y_RNA.507-201ENST00000384500 99 ntBASIC1.23□□□□□ -2.21
SNED1Q8TER0 Y_RNA.537-201ENST00000384626 109 ntBASIC1.23□□□□□ -2.21
SNED1Q8TER0 Y_RNA.544-201ENST00000384650 113 ntBASIC1.23□□□□□ -2.21
SNED1Q8TER0 MIR590-201ENST00000385008 97 ntBASIC1.23□□□□□ -2.21
SNED1Q8TER0 MIR513A1-201ENST00000385138 129 ntBASIC1.23□□□□□ -2.21
SNED1Q8TER0 RNU6-816P-201ENST00000390914 107 ntBASIC1.23□□□□□ -2.21
SNED1Q8TER0 RNU6-1268P-201ENST00000391214 107 ntBASIC1.23□□□□□ -2.21
SNED1Q8TER0 RNU6-1239P-201ENST00000391310 107 ntBASIC1.23□□□□□ -2.21
SNED1Q8TER0 RNU4-69P-201ENST00000410677 143 ntBASIC1.23□□□□□ -2.21
SNED1Q8TER0 SNORA40.13-201ENST00000516379 120 ntBASIC1.23□□□□□ -2.21
SNED1Q8TER0 SNORA74.3-201ENST00000517108 154 ntBASIC1.23□□□□□ -2.21
SNED1Q8TER0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 190.3 ms