Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 SNORA18-201ENST00000384416 132 ntBASIC-0.26□□□□□ -2.45
LMX1AQ8TE12 MIR616-201ENST00000385293 97 ntBASIC-0.26□□□□□ -2.45
LMX1AQ8TE12 ELOCP20-201ENST00000422460 345 ntBASIC-0.26□□□□□ -2.45
LMX1AQ8TE12 AC244505.6-201ENST00000452829 130 ntBASIC-0.26□□□□□ -2.45
LMX1AQ8TE12 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.26□□□□□ -2.45
LMX1AQ8TE12 MIR1270-201ENST00000459320 83 ntBASIC-0.26□□□□□ -2.45
LMX1AQ8TE12 MIR3129-201ENST00000581095 76 ntBASIC-0.26□□□□□ -2.45
LMX1AQ8TE12 AC037487.3-201ENST00000606668 112 ntBASIC-0.26□□□□□ -2.45
LMX1AQ8TE12 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.26□□□□□ -2.45
LMX1AQ8TE12 MIR6514-201ENST00000622549 70 ntBASIC-0.26□□□□□ -2.45
LMX1AQ8TE12 SNORD115-24-201ENST00000363528 82 ntBASIC-0.27□□□□□ -2.45
LMX1AQ8TE12 SNORD114-11-201ENST00000363738 75 ntBASIC-0.27□□□□□ -2.45
LMX1AQ8TE12 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.27□□□□□ -2.45
LMX1AQ8TE12 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.27□□□□□ -2.45
LMX1AQ8TE12 RNU6-865P-201ENST00000364772 107 ntBASIC-0.27□□□□□ -2.45
LMX1AQ8TE12 RNY1P2-201ENST00000364820 117 ntBASIC-0.27□□□□□ -2.45
LMX1AQ8TE12 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.27□□□□□ -2.45
LMX1AQ8TE12 RPL21P38-201ENST00000418090 167 ntBASIC-0.27□□□□□ -2.45
LMX1AQ8TE12 Z95118.1-201ENST00000421372 247 ntBASIC-0.27□□□□□ -2.45
LMX1AQ8TE12 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-0.27□□□□□ -2.45
LMX1AQ8TE12 SNORD4A-201ENST00000459174 72 ntBASIC-0.27□□□□□ -2.45
LMX1AQ8TE12 SERF1AP1-201ENST00000514575 187 ntBASIC-0.27□□□□□ -2.45
LMX1AQ8TE12 RNU6-561P-201ENST00000516222 102 ntBASIC-0.27□□□□□ -2.45
LMX1AQ8TE12 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.27□□□□□ -2.45
LMX1AQ8TE12 RNU6-453P-201ENST00000516819 85 ntBASIC-0.27□□□□□ -2.45
LMX1AQ8TE12 RNU7-35P-201ENST00000517174 62 ntBASIC-0.27□□□□□ -2.45
LMX1AQ8TE12 Y_RNA.721-201ENST00000517207 102 ntBASIC-0.27□□□□□ -2.45
LMX1AQ8TE12 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.27□□□□□ -2.45
LMX1AQ8TE12 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.27□□□□□ -2.45
LMX1AQ8TE12 AL359881.1-201ENST00000602916 267 ntBASIC-0.27□□□□□ -2.45
LMX1AQ8TE12 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.27□□□□□ -2.45
LMX1AQ8TE12 MIR6507-201ENST00000613630 70 ntBASIC-0.27□□□□□ -2.45
LMX1AQ8TE12 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.28□□□□□ -2.45
LMX1AQ8TE12 SNORA18.1-201ENST00000363418 128 ntBASIC-0.28□□□□□ -2.45
LMX1AQ8TE12 RNA5SP403-201ENST00000363598 108 ntBASIC-0.28□□□□□ -2.45
LMX1AQ8TE12 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.28□□□□□ -2.45
LMX1AQ8TE12 RNU4-16P-201ENST00000364737 141 ntBASIC-0.28□□□□□ -2.45
LMX1AQ8TE12 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.28□□□□□ -2.45
LMX1AQ8TE12 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.28□□□□□ -2.45
LMX1AQ8TE12 SNORA20-201ENST00000384662 132 ntBASIC-0.28□□□□□ -2.45
LMX1AQ8TE12 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.28□□□□□ -2.45
LMX1AQ8TE12 AL606845.1-201ENST00000404881 255 ntBASIC-0.28□□□□□ -2.45
LMX1AQ8TE12 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.28□□□□□ -2.45
LMX1AQ8TE12 SNORD2.1-201ENST00000458762 69 ntBASIC-0.28□□□□□ -2.45
LMX1AQ8TE12 RNU6-893P-201ENST00000458841 100 ntBASIC-0.28□□□□□ -2.45
LMX1AQ8TE12 RNA5SP484-201ENST00000458857 111 ntBASIC-0.28□□□□□ -2.45
LMX1AQ8TE12 SCARNA15-202ENST00000516881 127 ntBASIC-0.28□□□□□ -2.45
LMX1AQ8TE12 RN7SL660P-201ENST00000614852 299 ntBASIC-0.28□□□□□ -2.45
LMX1AQ8TE12 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.29□□□□□ -2.46
LMX1AQ8TE12 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.29□□□□□ -2.46
LMX1AQ8TE12 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.29□□□□□ -2.46
LMX1AQ8TE12 RNU4-58P-201ENST00000363192 141 ntBASIC-0.29□□□□□ -2.46
LMX1AQ8TE12 RNA5SP205-201ENST00000364653 136 ntBASIC-0.29□□□□□ -2.46
LMX1AQ8TE12 RNU6-450P-201ENST00000364654 107 ntBASIC-0.29□□□□□ -2.46
LMX1AQ8TE12 SNORD114-12-201ENST00000365400 75 ntBASIC-0.29□□□□□ -2.46
LMX1AQ8TE12 SNORA22B-201ENST00000383876 138 ntBASIC-0.29□□□□□ -2.46
LMX1AQ8TE12 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.29□□□□□ -2.46
LMX1AQ8TE12 MIR876-201ENST00000401147 81 ntBASIC-0.29□□□□□ -2.46
LMX1AQ8TE12 RNU4-43P-201ENST00000410628 137 ntBASIC-0.29□□□□□ -2.46
LMX1AQ8TE12 RNU7-104P-201ENST00000459398 79 ntBASIC-0.29□□□□□ -2.46
LMX1AQ8TE12 RNU7-79P-201ENST00000516082 62 ntBASIC-0.29□□□□□ -2.46
LMX1AQ8TE12 AC138749.4-201ENST00000563970 127 ntBASIC-0.29□□□□□ -2.46
LMX1AQ8TE12 AP001180.6-201ENST00000584918 159 ntBASIC-0.29□□□□□ -2.46
LMX1AQ8TE12 AL590491.3-201ENST00000610731 82 ntBASIC-0.29□□□□□ -2.46
LMX1AQ8TE12 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.29□□□□□ -2.46
LMX1AQ8TE12 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.29□□□□□ -2.46
LMX1AQ8TE12 RNA5SP133-201ENST00000363368 119 ntBASIC-0.3□□□□□ -2.46
LMX1AQ8TE12 RNU6-806P-201ENST00000365147 105 ntBASIC-0.3□□□□□ -2.46
LMX1AQ8TE12 RNU6-46P-201ENST00000383860 107 ntBASIC-0.3□□□□□ -2.46
LMX1AQ8TE12 RNU6-811P-201ENST00000384069 107 ntBASIC-0.3□□□□□ -2.46
LMX1AQ8TE12 RNU6-1009P-201ENST00000390996 107 ntBASIC-0.3□□□□□ -2.46
LMX1AQ8TE12 SNORD41.1-201ENST00000391000 69 ntBASIC-0.3□□□□□ -2.46
LMX1AQ8TE12 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.3□□□□□ -2.46
LMX1AQ8TE12 BX276092.1-201ENST00000427368 251 ntBASIC-0.3□□□□□ -2.46
LMX1AQ8TE12 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.3□□□□□ -2.46
LMX1AQ8TE12 U7.6-201ENST00000610841 64 ntBASIC-0.3□□□□□ -2.46
LMX1AQ8TE12 MIR8064-201ENST00000612863 90 ntBASIC-0.3□□□□□ -2.46
LMX1AQ8TE12 U6.109-201ENST00000636749 87 ntBASIC-0.3□□□□□ -2.46
LMX1AQ8TE12 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.31□□□□□ -2.46
LMX1AQ8TE12 SNORD115-2-201ENST00000362842 82 ntBASIC-0.31□□□□□ -2.46
LMX1AQ8TE12 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.31□□□□□ -2.46
LMX1AQ8TE12 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.31□□□□□ -2.46
LMX1AQ8TE12 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.31□□□□□ -2.46
LMX1AQ8TE12 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.31□□□□□ -2.46
LMX1AQ8TE12 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.31□□□□□ -2.46
LMX1AQ8TE12 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.31□□□□□ -2.46
LMX1AQ8TE12 SNORD115-20-201ENST00000365099 82 ntBASIC-0.31□□□□□ -2.46
LMX1AQ8TE12 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.31□□□□□ -2.46
LMX1AQ8TE12 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.31□□□□□ -2.46
LMX1AQ8TE12 MIR196A2-201ENST00000385189 110 ntBASIC-0.31□□□□□ -2.46
LMX1AQ8TE12 RNA5SP300-201ENST00000391197 107 ntBASIC-0.31□□□□□ -2.46
LMX1AQ8TE12 RNU6-101P-201ENST00000410323 104 ntBASIC-0.31□□□□□ -2.46
LMX1AQ8TE12 RNU6-651P-201ENST00000411040 105 ntBASIC-0.31□□□□□ -2.46
LMX1AQ8TE12 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.31□□□□□ -2.46
LMX1AQ8TE12 MTND3P22-201ENST00000510932 243 ntBASIC-0.31□□□□□ -2.46
LMX1AQ8TE12 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.31□□□□□ -2.46
LMX1AQ8TE12 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.31□□□□□ -2.46
LMX1AQ8TE12 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.31□□□□□ -2.46
LMX1AQ8TE12 NAMPTP3-201ENST00000569273 224 ntBASIC-0.31□□□□□ -2.46
LMX1AQ8TE12 MIR4645-201ENST00000583158 77 ntBASIC-0.31□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms