Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 MIR151B-201ENST00000584249 96 ntBASIC0.31□□□□□ -2.36
CCDC197Q8NCU1 MIR3149-201ENST00000584629 83 ntBASIC0.31□□□□□ -2.36
CCDC197Q8NCU1 SNORA25.18-201ENST00000607153 114 ntBASIC0.31□□□□□ -2.36
CCDC197Q8NCU1 uc_338.16-201ENST00000621804 95 ntBASIC0.31□□□□□ -2.36
CCDC197Q8NCU1 RNA5SP432-201ENST00000362480 116 ntBASIC0.3□□□□□ -2.36
CCDC197Q8NCU1 SNORD118-201ENST00000363593 134 ntBASIC0.3□□□□□ -2.36
CCDC197Q8NCU1 SNORD114-22-201ENST00000365423 72 ntBASIC0.3□□□□□ -2.36
CCDC197Q8NCU1 Y_RNA.567-201ENST00000384736 106 ntBASIC0.3□□□□□ -2.36
CCDC197Q8NCU1 SNORD71-201ENST00000411292 86 ntBASIC0.3□□□□□ -2.36
CCDC197Q8NCU1 MIR5000-201ENST00000577717 103 ntBASIC0.3□□□□□ -2.36
CCDC197Q8NCU1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.3□□□□□ -2.36
CCDC197Q8NCU1 AC009779.6-201ENST00000603972 165 ntBASIC0.3□□□□□ -2.36
CCDC197Q8NCU1 AC090625.1-201ENST00000357130 210 ntBASIC0.29□□□□□ -2.36
CCDC197Q8NCU1 MIR103A1-201ENST00000362165 78 ntBASIC0.29□□□□□ -2.36
CCDC197Q8NCU1 Y_RNA.32-201ENST00000362589 110 ntBASIC0.29□□□□□ -2.36
CCDC197Q8NCU1 Y_RNA.83-201ENST00000363005 113 ntBASIC0.29□□□□□ -2.36
CCDC197Q8NCU1 SNORD44.1-201ENST00000363202 61 ntBASIC0.29□□□□□ -2.36
CCDC197Q8NCU1 SNORA36.1-201ENST00000363424 132 ntBASIC0.29□□□□□ -2.36
CCDC197Q8NCU1 RNU6-1020P-201ENST00000363684 107 ntBASIC0.29□□□□□ -2.36
CCDC197Q8NCU1 RNU6-1082P-201ENST00000364574 107 ntBASIC0.29□□□□□ -2.36
CCDC197Q8NCU1 RNU6-574P-201ENST00000384265 107 ntBASIC0.29□□□□□ -2.36
CCDC197Q8NCU1 MIR644A-201ENST00000385262 94 ntBASIC0.29□□□□□ -2.36
CCDC197Q8NCU1 AC092628.1-201ENST00000436250 252 ntBASIC0.29□□□□□ -2.36
CCDC197Q8NCU1 RNU7-35P-201ENST00000517174 62 ntBASIC0.29□□□□□ -2.36
CCDC197Q8NCU1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.29□□□□□ -2.36
CCDC197Q8NCU1 MIR6788-201ENST00000618842 66 ntBASIC0.29□□□□□ -2.36
CCDC197Q8NCU1 AC099654.10-201ENST00000640395 161 ntBASIC0.29□□□□□ -2.36
CCDC197Q8NCU1 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
CCDC197Q8NCU1 RNU6-312P-201ENST00000364629 107 ntBASIC0.28□□□□□ -2.36
CCDC197Q8NCU1 RNU6-1327P-201ENST00000365302 105 ntBASIC0.28□□□□□ -2.36
CCDC197Q8NCU1 Y_RNA.470-201ENST00000384307 117 ntBASIC0.28□□□□□ -2.36
CCDC197Q8NCU1 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.28□□□□□ -2.36
CCDC197Q8NCU1 MIR1276-201ENST00000408707 83 ntBASIC0.28□□□□□ -2.36
CCDC197Q8NCU1 AC108740.1-201ENST00000498629 225 ntBASIC0.28□□□□□ -2.36
CCDC197Q8NCU1 AC107027.2-201ENST00000512197 115 ntBASIC0.28□□□□□ -2.36
CCDC197Q8NCU1 RNU7-79P-201ENST00000516082 62 ntBASIC0.28□□□□□ -2.36
CCDC197Q8NCU1 RNU6-469P-201ENST00000516253 101 ntBASIC0.28□□□□□ -2.36
CCDC197Q8NCU1 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
CCDC197Q8NCU1 AC022523.2-201ENST00000561045 150 ntBASIC0.28□□□□□ -2.36
CCDC197Q8NCU1 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.28□□□□□ -2.36
CCDC197Q8NCU1 AC243829.3-201ENST00000622177 108 ntBASIC0.28□□□□□ -2.36
CCDC197Q8NCU1 AL589743.1-201ENST00000551932 2712 ntBASIC0.28□□□□□ -2.37
CCDC197Q8NCU1 SNORD115-2-201ENST00000362842 82 ntBASIC0.27□□□□□ -2.37
CCDC197Q8NCU1 Y_RNA.174-201ENST00000363781 105 ntBASIC0.27□□□□□ -2.37
CCDC197Q8NCU1 SNORD115-20-201ENST00000365099 82 ntBASIC0.27□□□□□ -2.37
CCDC197Q8NCU1 SNORA72.6-201ENST00000384520 129 ntBASIC0.27□□□□□ -2.37
CCDC197Q8NCU1 RNU6-291P-201ENST00000384720 107 ntBASIC0.27□□□□□ -2.37
CCDC197Q8NCU1 MIR548J-201ENST00000408833 112 ntBASIC0.27□□□□□ -2.37
CCDC197Q8NCU1 AL022718.1-201ENST00000412004 84 ntBASIC0.27□□□□□ -2.37
CCDC197Q8NCU1 AL512326.2-201ENST00000426359 151 ntBASIC0.27□□□□□ -2.37
CCDC197Q8NCU1 SNORA31.14-201ENST00000516728 116 ntBASIC0.27□□□□□ -2.37
CCDC197Q8NCU1 AC130289.1-201ENST00000577321 73 ntBASIC0.27□□□□□ -2.37
CCDC197Q8NCU1 AC078938.1-201ENST00000620993 318 ntBASIC0.27□□□□□ -2.37
CCDC197Q8NCU1 Y_RNA.233-201ENST00000364407 101 ntBASIC0.26□□□□□ -2.37
CCDC197Q8NCU1 RNU6-463P-201ENST00000384340 107 ntBASIC0.26□□□□□ -2.37
CCDC197Q8NCU1 Y_RNA.536-201ENST00000384621 113 ntBASIC0.26□□□□□ -2.37
CCDC197Q8NCU1 SNRPGP12-201ENST00000449481 213 ntBASIC0.26□□□□□ -2.37
CCDC197Q8NCU1 RNU7-113P-201ENST00000459273 62 ntBASIC0.26□□□□□ -2.37
CCDC197Q8NCU1 RNU6-1219P-201ENST00000516143 112 ntBASIC0.26□□□□□ -2.37
CCDC197Q8NCU1 SNORA25.16-201ENST00000516741 121 ntBASIC0.26□□□□□ -2.37
CCDC197Q8NCU1 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.26□□□□□ -2.37
CCDC197Q8NCU1 MTND5P34-201ENST00000568888 325 ntBASIC0.26□□□□□ -2.37
CCDC197Q8NCU1 AC243829.6-201ENST00000612652 106 ntBASIC0.26□□□□□ -2.37
CCDC197Q8NCU1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.26□□□□□ -2.37
CCDC197Q8NCU1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.25□□□□□ -2.37
CCDC197Q8NCU1 Y_RNA.224-201ENST00000364308 111 ntBASIC0.25□□□□□ -2.37
CCDC197Q8NCU1 RNU6-818P-201ENST00000364837 108 ntBASIC0.25□□□□□ -2.37
CCDC197Q8NCU1 SNORA75.5-201ENST00000391291 81 ntBASIC0.25□□□□□ -2.37
CCDC197Q8NCU1 RNU6-135P-201ENST00000516769 101 ntBASIC0.25□□□□□ -2.37
CCDC197Q8NCU1 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
CCDC197Q8NCU1 AC011603.4-201ENST00000611325 277 ntBASIC0.25□□□□□ -2.37
CCDC197Q8NCU1 MIR8070-201ENST00000616510 88 ntBASIC0.25□□□□□ -2.37
CCDC197Q8NCU1 Y_RNA.120-201ENST00000363304 110 ntBASIC0.24□□□□□ -2.37
CCDC197Q8NCU1 Y_RNA.164-201ENST00000363709 102 ntBASIC0.24□□□□□ -2.37
CCDC197Q8NCU1 Y_RNA.274-201ENST00000364714 101 ntBASIC0.24□□□□□ -2.37
CCDC197Q8NCU1 Y_RNA.337-201ENST00000365312 102 ntBASIC0.24□□□□□ -2.37
CCDC197Q8NCU1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
CCDC197Q8NCU1 RNU6-1194P-201ENST00000516208 104 ntBASIC0.24□□□□□ -2.37
CCDC197Q8NCU1 RNA5SP220-201ENST00000516298 104 ntBASIC0.24□□□□□ -2.37
CCDC197Q8NCU1 Y_RNA.697-201ENST00000516776 113 ntBASIC0.24□□□□□ -2.37
CCDC197Q8NCU1 RNU6-1223P-201ENST00000517124 104 ntBASIC0.24□□□□□ -2.37
CCDC197Q8NCU1 AC022559.1-201ENST00000520905 205 ntBASIC0.24□□□□□ -2.37
CCDC197Q8NCU1 MIR6828-201ENST00000636181 60 ntBASIC0.24□□□□□ -2.37
CCDC197Q8NCU1 Y_RNA.144-201ENST00000363521 113 ntBASIC0.23□□□□□ -2.37
CCDC197Q8NCU1 RNU6-690P-201ENST00000365242 106 ntBASIC0.23□□□□□ -2.37
CCDC197Q8NCU1 Y_RNA.497-201ENST00000384447 98 ntBASIC0.23□□□□□ -2.37
CCDC197Q8NCU1 RNU6-535P-201ENST00000384722 107 ntBASIC0.23□□□□□ -2.37
CCDC197Q8NCU1 RNA5SP33-201ENST00000516687 98 ntBASIC0.23□□□□□ -2.37
CCDC197Q8NCU1 RNA5SP268-201ENST00000516828 124 ntBASIC0.23□□□□□ -2.37
CCDC197Q8NCU1 RNU2-60P-201ENST00000517290 128 ntBASIC0.23□□□□□ -2.37
CCDC197Q8NCU1 MIR3646-201ENST00000578301 84 ntBASIC0.23□□□□□ -2.37
CCDC197Q8NCU1 Y_RNA.357-201ENST00000365487 109 ntBASIC0.22□□□□□ -2.37
CCDC197Q8NCU1 RNA5SP247-201ENST00000411181 105 ntBASIC0.22□□□□□ -2.37
CCDC197Q8NCU1 RNU6-863P-201ENST00000515989 104 ntBASIC0.22□□□□□ -2.37
CCDC197Q8NCU1 RNU2-35P-201ENST00000516446 142 ntBASIC0.22□□□□□ -2.37
CCDC197Q8NCU1 RNA5SP47-201ENST00000517230 109 ntBASIC0.22□□□□□ -2.37
CCDC197Q8NCU1 MIR3124-201ENST00000582636 67 ntBASIC0.22□□□□□ -2.37
CCDC197Q8NCU1 MIR4305-201ENST00000583252 102 ntBASIC0.22□□□□□ -2.37
CCDC197Q8NCU1 MIR6734-201ENST00000621166 68 ntBASIC0.22□□□□□ -2.37
CCDC197Q8NCU1 MIR6513-201ENST00000621188 64 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms