Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 snoU13.2-201ENST00000459201 104 ntBASIC0.93□□□□□ -2.26
USP38Q8NB14 AC113410.1-201ENST00000505029 247 ntBASIC0.93□□□□□ -2.26
USP38Q8NB14 AC025627.3-201ENST00000582078 182 ntBASIC0.93□□□□□ -2.26
USP38Q8NB14 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.93□□□□□ -2.26
USP38Q8NB14 FAM71BP1-201ENST00000604431 523 ntBASIC0.93□□□□□ -2.26
USP38Q8NB14 AC021613.1-201ENST00000623880 111 ntBASIC0.93□□□□□ -2.26
USP38Q8NB14 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
USP38Q8NB14 VTRNA1-3-201ENST00000365645 89 ntBASIC0.92□□□□□ -2.26
USP38Q8NB14 Y_RNA.785-201ENST00000384290 109 ntBASIC0.92□□□□□ -2.26
USP38Q8NB14 MIR605-201ENST00000385078 83 ntBASIC0.92□□□□□ -2.26
USP38Q8NB14 SNORA75.5-201ENST00000391291 81 ntBASIC0.92□□□□□ -2.26
USP38Q8NB14 SNORD99-201ENST00000408612 74 ntBASIC0.92□□□□□ -2.26
USP38Q8NB14 RPL39P25-201ENST00000449384 154 ntBASIC0.92□□□□□ -2.26
USP38Q8NB14 AL627230.5-201ENST00000619807 58 ntBASIC0.92□□□□□ -2.26
USP38Q8NB14 RNU4-84P-201ENST00000364200 139 ntBASIC0.91□□□□□ -2.26
USP38Q8NB14 MIR608-201ENST00000384820 100 ntBASIC0.91□□□□□ -2.26
USP38Q8NB14 MIR520F-201ENST00000384824 87 ntBASIC0.91□□□□□ -2.26
USP38Q8NB14 PSMC1P5-201ENST00000512850 177 ntBASIC0.91□□□□□ -2.26
USP38Q8NB14 Y_RNA.700-201ENST00000516806 100 ntBASIC0.91□□□□□ -2.26
USP38Q8NB14 MIR3658-201ENST00000636291 56 ntBASIC0.91□□□□□ -2.26
USP38Q8NB14 SNORA22.1-201ENST00000362701 134 ntBASIC0.9□□□□□ -2.27
USP38Q8NB14 SNORD105-201ENST00000386910 85 ntBASIC0.9□□□□□ -2.27
USP38Q8NB14 AC096720.1-201ENST00000604441 183 ntBASIC0.9□□□□□ -2.27
USP38Q8NB14 AL589743.1-201ENST00000551932 2712 ntBASIC0.89□□□□□ -2.27
USP38Q8NB14 SNORD114-2-201ENST00000363953 78 ntBASIC0.89□□□□□ -2.27
USP38Q8NB14 Y_RNA.280-201ENST00000364765 112 ntBASIC0.89□□□□□ -2.27
USP38Q8NB14 MIR508-201ENST00000384857 115 ntBASIC0.89□□□□□ -2.27
USP38Q8NB14 RNU7-121P-201ENST00000516604 62 ntBASIC0.89□□□□□ -2.27
USP38Q8NB14 RNU6-182P-201ENST00000516970 105 ntBASIC0.89□□□□□ -2.27
USP38Q8NB14 AC011195.1-201ENST00000578177 177 ntBASIC0.89□□□□□ -2.27
USP38Q8NB14 MIR4653-201ENST00000585107 83 ntBASIC0.89□□□□□ -2.27
USP38Q8NB14 AL353765.1-201ENST00000605514 183 ntBASIC0.89□□□□□ -2.27
USP38Q8NB14 Y_RNA.441-201ENST00000384123 112 ntBASIC0.88□□□□□ -2.27
USP38Q8NB14 RNY1P6-201ENST00000384193 109 ntBASIC0.88□□□□□ -2.27
USP38Q8NB14 RNU6-1135P-201ENST00000411083 103 ntBASIC0.88□□□□□ -2.27
USP38Q8NB14 MIR18B-201ENST00000454574 71 ntBASIC0.88□□□□□ -2.27
USP38Q8NB14 RNU6-351P-201ENST00000516097 100 ntBASIC0.88□□□□□ -2.27
USP38Q8NB14 MIR4676-201ENST00000583078 72 ntBASIC0.88□□□□□ -2.27
USP38Q8NB14 DNAJC19P2-201ENST00000593340 302 ntBASIC0.88□□□□□ -2.27
USP38Q8NB14 AC020891.4-201ENST00000605745 93 ntBASIC0.88□□□□□ -2.27
USP38Q8NB14 SNORD18B-201ENST00000365659 72 ntBASIC0.87□□□□□ -2.27
USP38Q8NB14 Y_RNA.430-201ENST00000384081 110 ntBASIC0.87□□□□□ -2.27
USP38Q8NB14 MIR520H-201ENST00000385126 88 ntBASIC0.87□□□□□ -2.27
USP38Q8NB14 MIR1257-201ENST00000408490 117 ntBASIC0.87□□□□□ -2.27
USP38Q8NB14 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.87□□□□□ -2.27
USP38Q8NB14 MIR3646-201ENST00000578301 84 ntBASIC0.87□□□□□ -2.27
USP38Q8NB14 MIR3671-201ENST00000580455 88 ntBASIC0.87□□□□□ -2.27
USP38Q8NB14 AC104465.1-201ENST00000611365 139 ntBASIC0.87□□□□□ -2.27
USP38Q8NB14 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.86□□□□□ -2.27
USP38Q8NB14 RNU6-369P-201ENST00000362515 102 ntBASIC0.86□□□□□ -2.27
USP38Q8NB14 Y_RNA.150-201ENST00000363562 102 ntBASIC0.86□□□□□ -2.27
USP38Q8NB14 RNU6-690P-201ENST00000365242 106 ntBASIC0.86□□□□□ -2.27
USP38Q8NB14 RNU6-364P-201ENST00000384387 107 ntBASIC0.86□□□□□ -2.27
USP38Q8NB14 Y_RNA.497-201ENST00000384447 98 ntBASIC0.86□□□□□ -2.27
USP38Q8NB14 MTATP6P21-201ENST00000440681 189 ntBASIC0.86□□□□□ -2.27
USP38Q8NB14 RNU6-794P-201ENST00000517261 64 ntBASIC0.86□□□□□ -2.27
USP38Q8NB14 AC013244.2-201ENST00000603396 103 ntBASIC0.86□□□□□ -2.27
USP38Q8NB14 MIR6835-201ENST00000621552 64 ntBASIC0.86□□□□□ -2.27
USP38Q8NB14 RNU6-508P-201ENST00000363231 103 ntBASIC0.85□□□□□ -2.27
USP38Q8NB14 Y_RNA.272-201ENST00000364696 102 ntBASIC0.85□□□□□ -2.27
USP38Q8NB14 MIR146A-201ENST00000385201 99 ntBASIC0.85□□□□□ -2.27
USP38Q8NB14 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.85□□□□□ -2.27
USP38Q8NB14 RNU6-893P-201ENST00000458841 100 ntBASIC0.85□□□□□ -2.27
USP38Q8NB14 RNU7-185P-201ENST00000459215 60 ntBASIC0.85□□□□□ -2.27
USP38Q8NB14 RNU5E-3P-201ENST00000515913 68 ntBASIC0.85□□□□□ -2.27
USP38Q8NB14 RNA5SP236-201ENST00000516169 116 ntBASIC0.85□□□□□ -2.27
USP38Q8NB14 RNU2-60P-201ENST00000517290 128 ntBASIC0.85□□□□□ -2.27
USP38Q8NB14 RNU6-1130P-201ENST00000365434 107 ntBASIC0.84□□□□□ -2.27
USP38Q8NB14 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
USP38Q8NB14 MT-TF-201ENST00000387314 71 ntBASIC0.84□□□□□ -2.27
USP38Q8NB14 Y_RNA.584-201ENST00000391090 114 ntBASIC0.84□□□□□ -2.27
USP38Q8NB14 PCNPP3-201ENST00000393579 471 ntBASIC0.84□□□□□ -2.27
USP38Q8NB14 MIR938-201ENST00000401216 83 ntBASIC0.84□□□□□ -2.27
USP38Q8NB14 SNORD93-201ENST00000408813 74 ntBASIC0.84□□□□□ -2.27
USP38Q8NB14 RNA5SP222-201ENST00000411039 105 ntBASIC0.84□□□□□ -2.27
USP38Q8NB14 AC108059.2-201ENST00000434626 151 ntBASIC0.84□□□□□ -2.27
USP38Q8NB14 MIR4804-201ENST00000581683 73 ntBASIC0.84□□□□□ -2.27
USP38Q8NB14 AL662814.1-201ENST00000617364 121 ntBASIC0.84□□□□□ -2.27
USP38Q8NB14 FTX_2.1-201ENST00000618816 94 ntBASIC0.84□□□□□ -2.27
USP38Q8NB14 AC243829.3-201ENST00000622177 108 ntBASIC0.84□□□□□ -2.27
USP38Q8NB14 MIR6866-201ENST00000638146 69 ntBASIC0.84□□□□□ -2.27
USP38Q8NB14 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
USP38Q8NB14 HSBP1P2-201ENST00000299671 229 ntBASIC0.83□□□□□ -2.28
USP38Q8NB14 MIR30D-201ENST00000362283 70 ntBASIC0.83□□□□□ -2.28
USP38Q8NB14 Y_RNA.8-201ENST00000362353 102 ntBASIC0.83□□□□□ -2.28
USP38Q8NB14 RNU6-151P-201ENST00000364158 107 ntBASIC0.83□□□□□ -2.28
USP38Q8NB14 Y_RNA.270-201ENST00000364693 104 ntBASIC0.83□□□□□ -2.28
USP38Q8NB14 RNU4-11P-201ENST00000365287 132 ntBASIC0.83□□□□□ -2.28
USP38Q8NB14 SNORA18-201ENST00000384416 132 ntBASIC0.83□□□□□ -2.28
USP38Q8NB14 MIR563-201ENST00000385080 79 ntBASIC0.83□□□□□ -2.28
USP38Q8NB14 RNU1-119P-201ENST00000391122 165 ntBASIC0.83□□□□□ -2.28
USP38Q8NB14 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.83□□□□□ -2.28
USP38Q8NB14 RNU6-394P-201ENST00000410735 107 ntBASIC0.83□□□□□ -2.28
USP38Q8NB14 RNU6-1258P-201ENST00000516911 111 ntBASIC0.83□□□□□ -2.28
USP38Q8NB14 AC004812.1-201ENST00000540773 146 ntBASIC0.83□□□□□ -2.28
USP38Q8NB14 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.83□□□□□ -2.28
USP38Q8NB14 MIR6841-201ENST00000637129 72 ntBASIC0.83□□□□□ -2.28
USP38Q8NB14 Y_RNA.171-201ENST00000363760 102 ntBASIC0.82□□□□□ -2.28
USP38Q8NB14 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
USP38Q8NB14 RNU6-804P-201ENST00000384286 107 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms