Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 Y_RNA.171-201ENST00000363760 102 ntBASIC1.04□□□□□ -2.24
CCDC33Q8N5R6 RNU6-915P-201ENST00000364943 103 ntBASIC1.04□□□□□ -2.24
CCDC33Q8N5R6 RNY1P5-201ENST00000383890 115 ntBASIC1.04□□□□□ -2.24
CCDC33Q8N5R6 MIR613-201ENST00000385248 95 ntBASIC1.04□□□□□ -2.24
CCDC33Q8N5R6 MT-TR-201ENST00000387439 65 ntBASIC1.04□□□□□ -2.24
CCDC33Q8N5R6 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.04□□□□□ -2.24
CCDC33Q8N5R6 AL022718.1-201ENST00000412004 84 ntBASIC1.04□□□□□ -2.24
CCDC33Q8N5R6 AC113410.1-201ENST00000505029 247 ntBASIC1.04□□□□□ -2.24
CCDC33Q8N5R6 MIR4771-2-201ENST00000577758 74 ntBASIC1.04□□□□□ -2.24
CCDC33Q8N5R6 MIR4771-1-201ENST00000582617 74 ntBASIC1.04□□□□□ -2.24
CCDC33Q8N5R6 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC33Q8N5R6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CCDC33Q8N5R6 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.03□□□□□ -2.24
CCDC33Q8N5R6 SNORD115-2-201ENST00000362842 82 ntBASIC1.03□□□□□ -2.24
CCDC33Q8N5R6 RNU6-1187P-201ENST00000364771 110 ntBASIC1.03□□□□□ -2.24
CCDC33Q8N5R6 SNORD115-20-201ENST00000365099 82 ntBASIC1.03□□□□□ -2.24
CCDC33Q8N5R6 RNU6-1335P-201ENST00000365426 107 ntBASIC1.03□□□□□ -2.24
CCDC33Q8N5R6 Y_RNA.420-201ENST00000384043 110 ntBASIC1.03□□□□□ -2.24
CCDC33Q8N5R6 MIR7-2-201ENST00000384970 110 ntBASIC1.03□□□□□ -2.24
CCDC33Q8N5R6 RNA5SP237-201ENST00000410414 113 ntBASIC1.03□□□□□ -2.24
CCDC33Q8N5R6 RNA5SP436-201ENST00000516020 115 ntBASIC1.03□□□□□ -2.24
CCDC33Q8N5R6 AC021443.1-201ENST00000604478 211 ntBASIC1.03□□□□□ -2.24
CCDC33Q8N5R6 MIR373-201ENST00000362273 69 ntBASIC1.02□□□□□ -2.25
CCDC33Q8N5R6 RNU4-38P-201ENST00000364472 129 ntBASIC1.02□□□□□ -2.25
CCDC33Q8N5R6 RNU1-36P-201ENST00000365130 165 ntBASIC1.02□□□□□ -2.25
CCDC33Q8N5R6 Y_RNA.488-201ENST00000384403 102 ntBASIC1.02□□□□□ -2.25
CCDC33Q8N5R6 SNORA18-201ENST00000384416 132 ntBASIC1.02□□□□□ -2.25
CCDC33Q8N5R6 Y_RNA.540-201ENST00000384638 111 ntBASIC1.02□□□□□ -2.25
CCDC33Q8N5R6 MIR100-201ENST00000385259 80 ntBASIC1.02□□□□□ -2.25
CCDC33Q8N5R6 RNU2-35P-201ENST00000516446 142 ntBASIC1.02□□□□□ -2.25
CCDC33Q8N5R6 RNA5SP480-201ENST00000516840 109 ntBASIC1.02□□□□□ -2.25
CCDC33Q8N5R6 AC141846.1-201ENST00000568348 142 ntBASIC1.02□□□□□ -2.25
CCDC33Q8N5R6 AC025627.3-201ENST00000582078 182 ntBASIC1.02□□□□□ -2.25
CCDC33Q8N5R6 AC020891.4-201ENST00000605745 93 ntBASIC1.02□□□□□ -2.25
CCDC33Q8N5R6 PVT1_3.1-201ENST00000620853 95 ntBASIC1.02□□□□□ -2.25
CCDC33Q8N5R6 RNU6-342P-201ENST00000384521 104 ntBASIC1.01□□□□□ -2.25
CCDC33Q8N5R6 AC015818.7-201ENST00000428754 109 ntBASIC1.01□□□□□ -2.25
CCDC33Q8N5R6 AC087499.7-201ENST00000441958 109 ntBASIC1.01□□□□□ -2.25
CCDC33Q8N5R6 RNU7-113P-201ENST00000459273 62 ntBASIC1.01□□□□□ -2.25
CCDC33Q8N5R6 AP001328.1-201ENST00000528550 176 ntBASIC1.01□□□□□ -2.25
CCDC33Q8N5R6 MIR3121-201ENST00000579680 77 ntBASIC1.01□□□□□ -2.25
CCDC33Q8N5R6 MIR3973-201ENST00000579824 107 ntBASIC1.01□□□□□ -2.25
CCDC33Q8N5R6 MIR4676-201ENST00000583078 72 ntBASIC1.01□□□□□ -2.25
CCDC33Q8N5R6 AC211469.2-201ENST00000605461 205 ntBASIC1.01□□□□□ -2.25
CCDC33Q8N5R6 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.01□□□□□ -2.25
CCDC33Q8N5R6 Y_RNA.366-201ENST00000365540 102 ntBASIC1□□□□□ -2.25
CCDC33Q8N5R6 Y_RNA.470-201ENST00000384307 117 ntBASIC1□□□□□ -2.25
CCDC33Q8N5R6 Y_RNA.506-201ENST00000384494 102 ntBASIC1□□□□□ -2.25
CCDC33Q8N5R6 RNU6-1237P-201ENST00000384777 107 ntBASIC1□□□□□ -2.25
CCDC33Q8N5R6 MIR598-201ENST00000384868 97 ntBASIC1□□□□□ -2.25
CCDC33Q8N5R6 RNU7-185P-201ENST00000459215 60 ntBASIC1□□□□□ -2.25
CCDC33Q8N5R6 RNU7-164P-201ENST00000459221 62 ntBASIC1□□□□□ -2.25
CCDC33Q8N5R6 Y_RNA.692-201ENST00000516627 105 ntBASIC1□□□□□ -2.25
CCDC33Q8N5R6 AC108081.1-201ENST00000604358 221 ntBASIC1□□□□□ -2.25
CCDC33Q8N5R6 AC023934.1-201ENST00000574529 2389 ntBASIC0.99□□□□□ -2.25
CCDC33Q8N5R6 Y_RNA.531-201ENST00000384589 121 ntBASIC0.99□□□□□ -2.25
CCDC33Q8N5R6 SNORD105-201ENST00000386910 85 ntBASIC0.99□□□□□ -2.25
CCDC33Q8N5R6 MIR1257-201ENST00000408490 117 ntBASIC0.99□□□□□ -2.25
CCDC33Q8N5R6 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.99□□□□□ -2.25
CCDC33Q8N5R6 RNU6-1086P-201ENST00000410930 100 ntBASIC0.99□□□□□ -2.25
CCDC33Q8N5R6 AL512326.2-201ENST00000426359 151 ntBASIC0.99□□□□□ -2.25
CCDC33Q8N5R6 RNU7-123P-201ENST00000515911 60 ntBASIC0.99□□□□□ -2.25
CCDC33Q8N5R6 RNU6-977P-201ENST00000516411 103 ntBASIC0.99□□□□□ -2.25
CCDC33Q8N5R6 RNU6-426P-201ENST00000516464 97 ntBASIC0.99□□□□□ -2.25
CCDC33Q8N5R6 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.99□□□□□ -2.25
CCDC33Q8N5R6 AC004812.1-201ENST00000540773 146 ntBASIC0.99□□□□□ -2.25
CCDC33Q8N5R6 MIR4804-201ENST00000581683 73 ntBASIC0.99□□□□□ -2.25
CCDC33Q8N5R6 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.99□□□□□ -2.25
CCDC33Q8N5R6 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.98□□□□□ -2.25
CCDC33Q8N5R6 RPL39P28-201ENST00000465655 155 ntBASIC0.98□□□□□ -2.25
CCDC33Q8N5R6 MIR4698-201ENST00000577795 80 ntBASIC0.98□□□□□ -2.25
CCDC33Q8N5R6 AL353765.1-201ENST00000605514 183 ntBASIC0.98□□□□□ -2.25
CCDC33Q8N5R6 Y_RNA.280-201ENST00000364765 112 ntBASIC0.97□□□□□ -2.25
CCDC33Q8N5R6 Y_RNA.298-201ENST00000364960 107 ntBASIC0.97□□□□□ -2.25
CCDC33Q8N5R6 RNU6-949P-201ENST00000384040 107 ntBASIC0.97□□□□□ -2.25
CCDC33Q8N5R6 MIR608-201ENST00000384820 100 ntBASIC0.97□□□□□ -2.25
CCDC33Q8N5R6 MIR125B2-201ENST00000385128 89 ntBASIC0.97□□□□□ -2.25
CCDC33Q8N5R6 RNA5SP33-201ENST00000516687 98 ntBASIC0.97□□□□□ -2.25
CCDC33Q8N5R6 RNU7-35P-201ENST00000517174 62 ntBASIC0.97□□□□□ -2.25
CCDC33Q8N5R6 U7.2-201ENST00000607576 63 ntBASIC0.97□□□□□ -2.25
CCDC33Q8N5R6 AL137067.1-201ENST00000615933 120 ntBASIC0.97□□□□□ -2.25
CCDC33Q8N5R6 MIR520F-201ENST00000384824 87 ntBASIC0.96□□□□□ -2.26
CCDC33Q8N5R6 RNU7-56P-201ENST00000458744 62 ntBASIC0.96□□□□□ -2.26
CCDC33Q8N5R6 RNU5E-3P-201ENST00000515913 68 ntBASIC0.96□□□□□ -2.26
CCDC33Q8N5R6 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.96□□□□□ -2.26
CCDC33Q8N5R6 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
CCDC33Q8N5R6 RNY1P13-201ENST00000365030 105 ntBASIC0.95□□□□□ -2.26
CCDC33Q8N5R6 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CCDC33Q8N5R6 MIR532-201ENST00000385025 91 ntBASIC0.95□□□□□ -2.26
CCDC33Q8N5R6 MIR938-201ENST00000401216 83 ntBASIC0.95□□□□□ -2.26
CCDC33Q8N5R6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.95□□□□□ -2.26
CCDC33Q8N5R6 SNORD99-201ENST00000408612 74 ntBASIC0.95□□□□□ -2.26
CCDC33Q8N5R6 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.95□□□□□ -2.26
CCDC33Q8N5R6 CYP3A137P-201ENST00000562436 69 ntBASIC0.95□□□□□ -2.26
CCDC33Q8N5R6 MIR5000-201ENST00000577717 103 ntBASIC0.95□□□□□ -2.26
CCDC33Q8N5R6 MIR548AE2-201ENST00000583456 67 ntBASIC0.95□□□□□ -2.26
CCDC33Q8N5R6 Y_RNA.114-201ENST00000363265 113 ntBASIC0.94□□□□□ -2.26
CCDC33Q8N5R6 Y_RNA.568-201ENST00000384742 113 ntBASIC0.94□□□□□ -2.26
CCDC33Q8N5R6 U8.15-201ENST00000390947 134 ntBASIC0.94□□□□□ -2.26
CCDC33Q8N5R6 AC096949.1-201ENST00000412047 152 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms