Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 PDCD5P2-201ENST00000507570 312 ntBASIC1.07□□□□□ -2.24
HERC6Q8IVU3 RNU6-1258P-201ENST00000516911 111 ntBASIC1.07□□□□□ -2.24
HERC6Q8IVU3 AC021613.1-201ENST00000623880 111 ntBASIC1.07□□□□□ -2.24
HERC6Q8IVU3 Y_RNA.168-201ENST00000363740 102 ntBASIC1.06□□□□□ -2.24
HERC6Q8IVU3 SNORD50.2-201ENST00000365465 70 ntBASIC1.06□□□□□ -2.24
HERC6Q8IVU3 SNORA22-201ENST00000383907 134 ntBASIC1.06□□□□□ -2.24
HERC6Q8IVU3 RNY1P6-201ENST00000384193 109 ntBASIC1.06□□□□□ -2.24
HERC6Q8IVU3 SNORA22C-201ENST00000384614 134 ntBASIC1.06□□□□□ -2.24
HERC6Q8IVU3 Y_RNA.586-201ENST00000391146 98 ntBASIC1.06□□□□□ -2.24
HERC6Q8IVU3 POLR2J4-204ENST00000418424 324 ntBASIC1.06□□□□□ -2.24
HERC6Q8IVU3 MTATP6P21-201ENST00000440681 189 ntBASIC1.06□□□□□ -2.24
HERC6Q8IVU3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.06□□□□□ -2.24
HERC6Q8IVU3 RNU6-240P-201ENST00000516098 97 ntBASIC1.06□□□□□ -2.24
HERC6Q8IVU3 IGKV1-22-201ENST00000524313 326 ntBASIC1.06□□□□□ -2.24
HERC6Q8IVU3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.06□□□□□ -2.24
HERC6Q8IVU3 RNU6-704P-201ENST00000364162 103 ntBASIC1.05□□□□□ -2.24
HERC6Q8IVU3 Y_RNA.280-201ENST00000364765 112 ntBASIC1.05□□□□□ -2.24
HERC6Q8IVU3 RNA5SP95-201ENST00000410319 137 ntBASIC1.05□□□□□ -2.24
HERC6Q8IVU3 U7.7-201ENST00000459276 60 ntBASIC1.05□□□□□ -2.24
HERC6Q8IVU3 RNU5E-3P-201ENST00000515913 68 ntBASIC1.05□□□□□ -2.24
HERC6Q8IVU3 Y_RNA.692-201ENST00000516627 105 ntBASIC1.05□□□□□ -2.24
HERC6Q8IVU3 MIR3152-201ENST00000579801 74 ntBASIC1.05□□□□□ -2.24
HERC6Q8IVU3 AC025627.3-201ENST00000582078 182 ntBASIC1.05□□□□□ -2.24
HERC6Q8IVU3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.05□□□□□ -2.24
HERC6Q8IVU3 MIR6841-201ENST00000637129 72 ntBASIC1.05□□□□□ -2.24
HERC6Q8IVU3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
HERC6Q8IVU3 Y_RNA.114-201ENST00000363265 113 ntBASIC1.04□□□□□ -2.24
HERC6Q8IVU3 Y_RNA.366-201ENST00000365540 102 ntBASIC1.04□□□□□ -2.24
HERC6Q8IVU3 Y_RNA.430-201ENST00000384081 110 ntBASIC1.04□□□□□ -2.24
HERC6Q8IVU3 SNORD12C-201ENST00000386307 89 ntBASIC1.04□□□□□ -2.24
HERC6Q8IVU3 AL603908.1-201ENST00000406098 201 ntBASIC1.04□□□□□ -2.24
HERC6Q8IVU3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.04□□□□□ -2.24
HERC6Q8IVU3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.04□□□□□ -2.24
HERC6Q8IVU3 AC011603.4-201ENST00000611325 277 ntBASIC1.04□□□□□ -2.24
HERC6Q8IVU3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.03□□□□□ -2.24
HERC6Q8IVU3 RNU6-690P-201ENST00000365242 106 ntBASIC1.03□□□□□ -2.24
HERC6Q8IVU3 SNORA40-201ENST00000388090 126 ntBASIC1.03□□□□□ -2.24
HERC6Q8IVU3 RNA5SP144-201ENST00000410846 116 ntBASIC1.03□□□□□ -2.24
HERC6Q8IVU3 RPS3AP1-201ENST00000413190 320 ntBASIC1.03□□□□□ -2.24
HERC6Q8IVU3 RNU2-35P-201ENST00000516446 142 ntBASIC1.03□□□□□ -2.24
HERC6Q8IVU3 Y_RNA.757-201ENST00000578934 114 ntBASIC1.03□□□□□ -2.24
HERC6Q8IVU3 MIR1-1-201ENST00000362147 71 ntBASIC1.02□□□□□ -2.25
HERC6Q8IVU3 SNORA22.1-201ENST00000362701 134 ntBASIC1.02□□□□□ -2.25
HERC6Q8IVU3 Y_RNA.171-201ENST00000363760 102 ntBASIC1.02□□□□□ -2.25
HERC6Q8IVU3 AL512326.2-201ENST00000426359 151 ntBASIC1.02□□□□□ -2.25
HERC6Q8IVU3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.02□□□□□ -2.25
HERC6Q8IVU3 RNU6-1110P-201ENST00000516462 101 ntBASIC1.02□□□□□ -2.25
HERC6Q8IVU3 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
HERC6Q8IVU3 U7.2-201ENST00000607576 63 ntBASIC1.02□□□□□ -2.25
HERC6Q8IVU3 uc_338.6-201ENST00000613544 171 ntBASIC1.02□□□□□ -2.25
HERC6Q8IVU3 RNU6-580P-201ENST00000365159 107 ntBASIC1.01□□□□□ -2.25
HERC6Q8IVU3 RNU6-205P-201ENST00000390858 107 ntBASIC1.01□□□□□ -2.25
HERC6Q8IVU3 AL158147.1-201ENST00000443970 75 ntBASIC1.01□□□□□ -2.25
HERC6Q8IVU3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.01□□□□□ -2.25
HERC6Q8IVU3 RNA5SP255-201ENST00000516370 107 ntBASIC1.01□□□□□ -2.25
HERC6Q8IVU3 RNU6-971P-201ENST00000516920 106 ntBASIC1.01□□□□□ -2.25
HERC6Q8IVU3 AC133485.4-201ENST00000561835 220 ntBASIC1.01□□□□□ -2.25
HERC6Q8IVU3 AC138907.4-201ENST00000570107 226 ntBASIC1.01□□□□□ -2.25
HERC6Q8IVU3 MIR4305-201ENST00000583252 102 ntBASIC1.01□□□□□ -2.25
HERC6Q8IVU3 RNU6-94P-201ENST00000607728 107 ntBASIC1.01□□□□□ -2.25
HERC6Q8IVU3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.01□□□□□ -2.25
HERC6Q8IVU3 TUG1_4.1-201ENST00000619464 181 ntBASIC1.01□□□□□ -2.25
HERC6Q8IVU3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
HERC6Q8IVU3 RNU6-235P-201ENST00000362644 107 ntBASIC1□□□□□ -2.25
HERC6Q8IVU3 RNU6-1211P-201ENST00000459179 105 ntBASIC1□□□□□ -2.25
HERC6Q8IVU3 RN7SKP19-201ENST00000516016 252 ntBASIC1□□□□□ -2.25
HERC6Q8IVU3 MIR4698-201ENST00000577795 80 ntBASIC1□□□□□ -2.25
HERC6Q8IVU3 AC021443.1-201ENST00000604478 211 ntBASIC1□□□□□ -2.25
HERC6Q8IVU3 MIR6740-201ENST00000618268 113 ntBASIC1□□□□□ -2.25
HERC6Q8IVU3 RNU1-36P-201ENST00000365130 165 ntBASIC0.99□□□□□ -2.25
HERC6Q8IVU3 Y_RNA.470-201ENST00000384307 117 ntBASIC0.99□□□□□ -2.25
HERC6Q8IVU3 RNU6-1104P-201ENST00000384723 104 ntBASIC0.99□□□□□ -2.25
HERC6Q8IVU3 SNORD89-201ENST00000390981 114 ntBASIC0.99□□□□□ -2.25
HERC6Q8IVU3 Y_RNA.617-201ENST00000410920 90 ntBASIC0.99□□□□□ -2.25
HERC6Q8IVU3 RNU7-62P-201ENST00000458856 62 ntBASIC0.99□□□□□ -2.25
HERC6Q8IVU3 snoU13.2-201ENST00000459201 104 ntBASIC0.99□□□□□ -2.25
HERC6Q8IVU3 snoU13.21-201ENST00000459368 105 ntBASIC0.99□□□□□ -2.25
HERC6Q8IVU3 AC004812.1-201ENST00000540773 146 ntBASIC0.99□□□□□ -2.25
HERC6Q8IVU3 AL137067.1-201ENST00000615933 120 ntBASIC0.99□□□□□ -2.25
HERC6Q8IVU3 Y_RNA.298-201ENST00000364960 107 ntBASIC0.98□□□□□ -2.25
HERC6Q8IVU3 RNU6-934P-201ENST00000365154 107 ntBASIC0.98□□□□□ -2.25
HERC6Q8IVU3 RNU6-893P-201ENST00000458841 100 ntBASIC0.98□□□□□ -2.25
HERC6Q8IVU3 RNU7-164P-201ENST00000459221 62 ntBASIC0.98□□□□□ -2.25
HERC6Q8IVU3 RNU7-123P-201ENST00000515911 60 ntBASIC0.98□□□□□ -2.25
HERC6Q8IVU3 RNU6-781P-201ENST00000516377 101 ntBASIC0.98□□□□□ -2.25
HERC6Q8IVU3 RNU6-1234P-201ENST00000516877 103 ntBASIC0.98□□□□□ -2.25
HERC6Q8IVU3 MIR4714-201ENST00000580728 77 ntBASIC0.98□□□□□ -2.25
HERC6Q8IVU3 MIR3910-1-201ENST00000580936 111 ntBASIC0.98□□□□□ -2.25
HERC6Q8IVU3 SNORD115-2-201ENST00000362842 82 ntBASIC0.97□□□□□ -2.25
HERC6Q8IVU3 Y_RNA.218-201ENST00000364218 104 ntBASIC0.97□□□□□ -2.25
HERC6Q8IVU3 SNORD115-20-201ENST00000365099 82 ntBASIC0.97□□□□□ -2.25
HERC6Q8IVU3 RNU6-81P-201ENST00000365608 104 ntBASIC0.97□□□□□ -2.25
HERC6Q8IVU3 Y_RNA.525-201ENST00000384570 113 ntBASIC0.97□□□□□ -2.25
HERC6Q8IVU3 Y_RNA.531-201ENST00000384589 121 ntBASIC0.97□□□□□ -2.25
HERC6Q8IVU3 MIR588-201ENST00000384900 83 ntBASIC0.97□□□□□ -2.25
HERC6Q8IVU3 MIR100-201ENST00000385259 80 ntBASIC0.97□□□□□ -2.25
HERC6Q8IVU3 MT-TI-201ENST00000387365 69 ntBASIC0.97□□□□□ -2.25
HERC6Q8IVU3 Y_RNA.30-201ENST00000362572 97 ntBASIC0.96□□□□□ -2.26
HERC6Q8IVU3 RNU6-647P-201ENST00000364243 107 ntBASIC0.96□□□□□ -2.26
HERC6Q8IVU3 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 337.2 ms