Protein–RNA interactions for Protein: Q86UA6

RPAIN, RPA-interacting protein, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAINQ86UA6 Y_RNA.662-201ENST00000516028 97 ntBASIC0.68□□□□□ -2.3
RPAINQ86UA6 RNU7-121P-201ENST00000516604 62 ntBASIC0.68□□□□□ -2.3
RPAINQ86UA6 MIR3646-201ENST00000578301 84 ntBASIC0.68□□□□□ -2.3
RPAINQ86UA6 AL353765.1-201ENST00000605514 183 ntBASIC0.68□□□□□ -2.3
RPAINQ86UA6 uc_338.6-201ENST00000613544 171 ntBASIC0.68□□□□□ -2.3
RPAINQ86UA6 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.68□□□□□ -2.3
RPAINQ86UA6 uc_338.17-201ENST00000619633 179 ntBASIC0.68□□□□□ -2.3
RPAINQ86UA6 AC021613.1-201ENST00000623880 111 ntBASIC0.68□□□□□ -2.3
RPAINQ86UA6 RNU6-369P-201ENST00000362515 102 ntBASIC0.67□□□□□ -2.3
RPAINQ86UA6 Y_RNA.52-201ENST00000362760 96 ntBASIC0.67□□□□□ -2.3
RPAINQ86UA6 SNORA20-201ENST00000384662 132 ntBASIC0.67□□□□□ -2.3
RPAINQ86UA6 MIR563-201ENST00000385080 79 ntBASIC0.67□□□□□ -2.3
RPAINQ86UA6 RNU6-1165P-201ENST00000410119 107 ntBASIC0.67□□□□□ -2.3
RPAINQ86UA6 RNU5E-9P-201ENST00000411164 104 ntBASIC0.67□□□□□ -2.3
RPAINQ86UA6 MIR18B-201ENST00000454574 71 ntBASIC0.67□□□□□ -2.3
RPAINQ86UA6 AC113410.1-201ENST00000505029 247 ntBASIC0.67□□□□□ -2.3
RPAINQ86UA6 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.67□□□□□ -2.3
RPAINQ86UA6 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.67□□□□□ -2.3
RPAINQ86UA6 RNA5SP499-201ENST00000363982 119 ntBASIC0.66□□□□□ -2.3
RPAINQ86UA6 RNU6-818P-201ENST00000364837 108 ntBASIC0.66□□□□□ -2.3
RPAINQ86UA6 RNU6-1318P-201ENST00000365389 103 ntBASIC0.66□□□□□ -2.3
RPAINQ86UA6 Y_RNA.441-201ENST00000384123 112 ntBASIC0.66□□□□□ -2.3
RPAINQ86UA6 SNORA75.5-201ENST00000391291 81 ntBASIC0.66□□□□□ -2.3
RPAINQ86UA6 RNU6-588P-201ENST00000410281 105 ntBASIC0.66□□□□□ -2.3
RPAINQ86UA6 RNU4-54P-201ENST00000516428 129 ntBASIC0.66□□□□□ -2.3
RPAINQ86UA6 RNU6-229P-201ENST00000516614 102 ntBASIC0.66□□□□□ -2.3
RPAINQ86UA6 MIR4771-2-201ENST00000577758 74 ntBASIC0.66□□□□□ -2.3
RPAINQ86UA6 MIR4771-1-201ENST00000582617 74 ntBASIC0.66□□□□□ -2.3
RPAINQ86UA6 AC010332.2-201ENST00000613083 1904 ntBASIC0.66□□□□□ -2.3
RPAINQ86UA6 Y_RNA.497-201ENST00000384447 98 ntBASIC0.65□□□□□ -2.31
RPAINQ86UA6 SNORD99-201ENST00000408612 74 ntBASIC0.65□□□□□ -2.31
RPAINQ86UA6 AC015818.7-201ENST00000428754 109 ntBASIC0.65□□□□□ -2.31
RPAINQ86UA6 AC087499.7-201ENST00000441958 109 ntBASIC0.65□□□□□ -2.31
RPAINQ86UA6 RNA5SP236-201ENST00000516169 116 ntBASIC0.65□□□□□ -2.31
RPAINQ86UA6 RNU6-977P-201ENST00000516411 103 ntBASIC0.65□□□□□ -2.31
RPAINQ86UA6 DNAJC19P2-201ENST00000593340 302 ntBASIC0.65□□□□□ -2.31
RPAINQ86UA6 MIR5087-201ENST00000635826 76 ntBASIC0.65□□□□□ -2.31
RPAINQ86UA6 MIR6841-201ENST00000637129 72 ntBASIC0.65□□□□□ -2.31
RPAINQ86UA6 SNORA22.1-201ENST00000362701 134 ntBASIC0.64□□□□□ -2.31
RPAINQ86UA6 RNY1P6-201ENST00000384193 109 ntBASIC0.64□□□□□ -2.31
RPAINQ86UA6 SNORD105-201ENST00000386910 85 ntBASIC0.64□□□□□ -2.31
RPAINQ86UA6 RNU6-1135P-201ENST00000411083 103 ntBASIC0.64□□□□□ -2.31
RPAINQ86UA6 RNU6-893P-201ENST00000458841 100 ntBASIC0.64□□□□□ -2.31
RPAINQ86UA6 RNU6-182P-201ENST00000516970 105 ntBASIC0.64□□□□□ -2.31
RPAINQ86UA6 MIR4676-201ENST00000583078 72 ntBASIC0.64□□□□□ -2.31
RPAINQ86UA6 AC020891.4-201ENST00000605745 93 ntBASIC0.64□□□□□ -2.31
RPAINQ86UA6 MIR3658-201ENST00000636291 56 ntBASIC0.64□□□□□ -2.31
RPAINQ86UA6 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.63□□□□□ -2.31
RPAINQ86UA6 MIR30D-201ENST00000362283 70 ntBASIC0.63□□□□□ -2.31
RPAINQ86UA6 RNU6-349P-201ENST00000362402 107 ntBASIC0.63□□□□□ -2.31
RPAINQ86UA6 Y_RNA.272-201ENST00000364696 102 ntBASIC0.63□□□□□ -2.31
RPAINQ86UA6 RNU4-16P-201ENST00000364737 141 ntBASIC0.63□□□□□ -2.31
RPAINQ86UA6 RNU6-1237P-201ENST00000384777 107 ntBASIC0.63□□□□□ -2.31
RPAINQ86UA6 MIR520F-201ENST00000384824 87 ntBASIC0.63□□□□□ -2.31
RPAINQ86UA6 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.63□□□□□ -2.31
RPAINQ86UA6 AC074198.2-201ENST00000508153 258 ntBASIC0.63□□□□□ -2.31
RPAINQ86UA6 MIR4804-201ENST00000581683 73 ntBASIC0.63□□□□□ -2.31
RPAINQ86UA6 AC023934.1-201ENST00000574529 2389 ntBASIC0.62□□□□□ -2.31
RPAINQ86UA6 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
RPAINQ86UA6 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
RPAINQ86UA6 MT-TF-201ENST00000387314 71 ntBASIC0.62□□□□□ -2.31
RPAINQ86UA6 SNORD37.2-201ENST00000391075 66 ntBASIC0.62□□□□□ -2.31
RPAINQ86UA6 RNU7-56P-201ENST00000458744 62 ntBASIC0.62□□□□□ -2.31
RPAINQ86UA6 RNU7-185P-201ENST00000459215 60 ntBASIC0.62□□□□□ -2.31
RPAINQ86UA6 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.62□□□□□ -2.31
RPAINQ86UA6 AC090425.1-201ENST00000610007 140 ntBASIC0.62□□□□□ -2.31
RPAINQ86UA6 RNA5SP237-201ENST00000410414 113 ntBASIC0.61□□□□□ -2.31
RPAINQ86UA6 MTATP6P21-201ENST00000440681 189 ntBASIC0.61□□□□□ -2.31
RPAINQ86UA6 RNA5SP395-201ENST00000516567 118 ntBASIC0.61□□□□□ -2.31
RPAINQ86UA6 RNU6-794P-201ENST00000517261 64 ntBASIC0.61□□□□□ -2.31
RPAINQ86UA6 Y_RNA.757-201ENST00000578934 114 ntBASIC0.61□□□□□ -2.31
RPAINQ86UA6 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.61□□□□□ -2.31
RPAINQ86UA6 MIR2909-201ENST00000617113 69 ntBASIC0.61□□□□□ -2.31
RPAINQ86UA6 AL662814.1-201ENST00000617364 121 ntBASIC0.61□□□□□ -2.31
RPAINQ86UA6 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.61□□□□□ -2.31
RPAINQ86UA6 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.6□□□□□ -2.31
RPAINQ86UA6 RNY1P11-201ENST00000363759 113 ntBASIC0.6□□□□□ -2.31
RPAINQ86UA6 MIR520H-201ENST00000385126 88 ntBASIC0.6□□□□□ -2.31
RPAINQ86UA6 MIR125B2-201ENST00000385128 89 ntBASIC0.6□□□□□ -2.31
RPAINQ86UA6 RNU1-119P-201ENST00000391122 165 ntBASIC0.6□□□□□ -2.31
RPAINQ86UA6 MIR938-201ENST00000401216 83 ntBASIC0.6□□□□□ -2.31
RPAINQ86UA6 AC244098.3-201ENST00000424803 96 ntBASIC0.6□□□□□ -2.31
RPAINQ86UA6 RNU6-1258P-201ENST00000516911 111 ntBASIC0.6□□□□□ -2.31
RPAINQ86UA6 RNU2-60P-201ENST00000517290 128 ntBASIC0.6□□□□□ -2.31
RPAINQ86UA6 AC018659.1-201ENST00000551083 169 ntBASIC0.6□□□□□ -2.31
RPAINQ86UA6 AC011195.1-201ENST00000578177 177 ntBASIC0.6□□□□□ -2.31
RPAINQ86UA6 AC011603.4-201ENST00000611325 277 ntBASIC0.6□□□□□ -2.31
RPAINQ86UA6 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
RPAINQ86UA6 SNORD18B-201ENST00000365659 72 ntBASIC0.59□□□□□ -2.31
RPAINQ86UA6 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
RPAINQ86UA6 Y_RNA.584-201ENST00000391090 114 ntBASIC0.59□□□□□ -2.31
RPAINQ86UA6 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.59□□□□□ -2.31
RPAINQ86UA6 RNU6-394P-201ENST00000410735 107 ntBASIC0.59□□□□□ -2.31
RPAINQ86UA6 RNA5SP144-201ENST00000410846 116 ntBASIC0.59□□□□□ -2.31
RPAINQ86UA6 RNA5SP476-201ENST00000516613 103 ntBASIC0.59□□□□□ -2.31
RPAINQ86UA6 Y_RNA.171-201ENST00000363760 102 ntBASIC0.58□□□□□ -2.32
RPAINQ86UA6 RNU6-690P-201ENST00000365242 106 ntBASIC0.58□□□□□ -2.32
RPAINQ86UA6 RNU6-364P-201ENST00000384387 107 ntBASIC0.58□□□□□ -2.32
RPAINQ86UA6 SNORA18-201ENST00000384416 132 ntBASIC0.58□□□□□ -2.32
RPAINQ86UA6 MIR1257-201ENST00000408490 117 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 213.1 ms