Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 RNU6-732P-201ENST00000516033 103 ntBASIC-3.25□□□□□ -2.93
LINC00643Q86TS7 Y_RNA.105-201ENST00000363182 111 ntBASIC-3.26□□□□□ -2.93
LINC00643Q86TS7 Y_RNA.230-201ENST00000364348 109 ntBASIC-3.26□□□□□ -2.93
LINC00643Q86TS7 RNU6-144P-201ENST00000383951 107 ntBASIC-3.26□□□□□ -2.93
LINC00643Q86TS7 RNU6-306P-201ENST00000384617 107 ntBASIC-3.26□□□□□ -2.93
LINC00643Q86TS7 RNU6-308P-201ENST00000390957 107 ntBASIC-3.26□□□□□ -2.93
LINC00643Q86TS7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-3.26□□□□□ -2.93
LINC00643Q86TS7 RNA5SP401-201ENST00000515920 127 ntBASIC-3.26□□□□□ -2.93
LINC00643Q86TS7 RNU6-850P-201ENST00000516934 103 ntBASIC-3.26□□□□□ -2.93
LINC00643Q86TS7 MIR4490-201ENST00000582647 84 ntBASIC-3.26□□□□□ -2.93
LINC00643Q86TS7 MIR548AE2-201ENST00000583456 67 ntBASIC-3.26□□□□□ -2.93
LINC00643Q86TS7 RNU6-500P-201ENST00000362349 107 ntBASIC-3.27□□□□□ -2.93
LINC00643Q86TS7 Y_RNA.127-201ENST00000363386 109 ntBASIC-3.27□□□□□ -2.93
LINC00643Q86TS7 RNY4P6-201ENST00000363667 96 ntBASIC-3.27□□□□□ -2.93
LINC00643Q86TS7 RNU6-102P-201ENST00000384485 104 ntBASIC-3.27□□□□□ -2.93
LINC00643Q86TS7 MTND1P2-201ENST00000430604 821 ntBASIC-3.27□□□□□ -2.93
LINC00643Q86TS7 RNU6-559P-201ENST00000516151 98 ntBASIC-3.27□□□□□ -2.93
LINC00643Q86TS7 MIR2355-201ENST00000517199 87 ntBASIC-3.27□□□□□ -2.93
LINC00643Q86TS7 RN7SKP295-201ENST00000517264 153 ntBASIC-3.27□□□□□ -2.93
LINC00643Q86TS7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-3.27□□□□□ -2.93
LINC00643Q86TS7 AC097639.2-201ENST00000603159 172 ntBASIC-3.27□□□□□ -2.93
LINC00643Q86TS7 U6.96-201ENST00000636425 70 ntBASIC-3.27□□□□□ -2.93
LINC00643Q86TS7 Y_RNA.76-201ENST00000362931 109 ntBASIC-3.28□□□□□ -2.93
LINC00643Q86TS7 SNORD115-19-201ENST00000363098 82 ntBASIC-3.28□□□□□ -2.93
LINC00643Q86TS7 SNORD115-18-201ENST00000363293 82 ntBASIC-3.28□□□□□ -2.93
LINC00643Q86TS7 Y_RNA.157-201ENST00000363638 102 ntBASIC-3.28□□□□□ -2.93
LINC00643Q86TS7 Y_RNA.212-201ENST00000364177 102 ntBASIC-3.28□□□□□ -2.93
LINC00643Q86TS7 SNORD115-17-201ENST00000364612 82 ntBASIC-3.28□□□□□ -2.93
LINC00643Q86TS7 Y_RNA.375-201ENST00000365625 101 ntBASIC-3.28□□□□□ -2.93
LINC00643Q86TS7 RNU6-80P-201ENST00000384195 107 ntBASIC-3.28□□□□□ -2.93
LINC00643Q86TS7 Y_RNA.488-201ENST00000384403 102 ntBASIC-3.28□□□□□ -2.93
LINC00643Q86TS7 RNU6-21P-201ENST00000384710 107 ntBASIC-3.28□□□□□ -2.93
LINC00643Q86TS7 RNU6-1242P-201ENST00000391052 103 ntBASIC-3.28□□□□□ -2.93
LINC00643Q86TS7 RNA5SP144-201ENST00000410846 116 ntBASIC-3.28□□□□□ -2.93
LINC00643Q86TS7 SNORD42B-201ENST00000458893 67 ntBASIC-3.28□□□□□ -2.93
LINC00643Q86TS7 MIR548AB-201ENST00000584917 84 ntBASIC-3.28□□□□□ -2.93
LINC00643Q86TS7 AC133104.2-201ENST00000615272 193 ntBASIC-3.28□□□□□ -2.93
LINC00643Q86TS7 RNU6-83P-201ENST00000384568 112 ntBASIC-3.29□□□□□ -2.94
LINC00643Q86TS7 MIR664B-201ENST00000626756 61 ntBASIC-3.29□□□□□ -2.94
LINC00643Q86TS7 Y_RNA.103-201ENST00000363171 102 ntBASIC-3.3□□□□□ -2.94
LINC00643Q86TS7 Y_RNA.120-201ENST00000363304 110 ntBASIC-3.3□□□□□ -2.94
LINC00643Q86TS7 RNU6-1205P-201ENST00000363625 106 ntBASIC-3.3□□□□□ -2.94
LINC00643Q86TS7 RNU6-636P-201ENST00000384598 107 ntBASIC-3.3□□□□□ -2.94
LINC00643Q86TS7 AC018880.2-201ENST00000414265 201 ntBASIC-3.3□□□□□ -2.94
LINC00643Q86TS7 RPS29P25-201ENST00000481709 171 ntBASIC-3.3□□□□□ -2.94
LINC00643Q86TS7 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-3.3□□□□□ -2.94
LINC00643Q86TS7 Y_RNA.159-201ENST00000363674 87 ntBASIC-3.31□□□□□ -2.94
LINC00643Q86TS7 Y_RNA.175-201ENST00000363794 111 ntBASIC-3.31□□□□□ -2.94
LINC00643Q86TS7 RNU6-801P-201ENST00000364087 105 ntBASIC-3.31□□□□□ -2.94
LINC00643Q86TS7 MIR206-201ENST00000384872 86 ntBASIC-3.31□□□□□ -2.94
LINC00643Q86TS7 Y_RNA.618-201ENST00000410949 107 ntBASIC-3.31□□□□□ -2.94
LINC00643Q86TS7 Y_RNA.679-201ENST00000516416 91 ntBASIC-3.31□□□□□ -2.94
LINC00643Q86TS7 SNORA18.6-201ENST00000516792 115 ntBASIC-3.31□□□□□ -2.94
LINC00643Q86TS7 RNU6-899P-201ENST00000363947 107 ntBASIC-3.32□□□□□ -2.94
LINC00643Q86TS7 Y_RNA.413-201ENST00000384007 102 ntBASIC-3.32□□□□□ -2.94
LINC00643Q86TS7 RNU6-1158P-201ENST00000391167 107 ntBASIC-3.32□□□□□ -2.94
LINC00643Q86TS7 AC090616.4-201ENST00000448026 115 ntBASIC-3.32□□□□□ -2.94
LINC00643Q86TS7 AL033528.1-201ENST00000453780 140 ntBASIC-3.32□□□□□ -2.94
LINC00643Q86TS7 Y_RNA.754-201ENST00000476024 102 ntBASIC-3.32□□□□□ -2.94
LINC00643Q86TS7 AC083904.1-201ENST00000487828 231 ntBASIC-3.32□□□□□ -2.94
LINC00643Q86TS7 FGF7P4-201ENST00000509595 295 ntBASIC-3.32□□□□□ -2.94
LINC00643Q86TS7 SEPT14P4-201ENST00000513445 186 ntBASIC-3.32□□□□□ -2.94
LINC00643Q86TS7 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-3.32□□□□□ -2.94
LINC00643Q86TS7 Y_RNA.790-201ENST00000614282 102 ntBASIC-3.32□□□□□ -2.94
LINC00643Q86TS7 Y_RNA.782-201ENST00000614695 102 ntBASIC-3.32□□□□□ -2.94
LINC00643Q86TS7 AC087741.2-201ENST00000619415 172 ntBASIC-3.32□□□□□ -2.94
LINC00643Q86TS7 RNU6-647P-201ENST00000364243 107 ntBASIC-3.33□□□□□ -2.94
LINC00643Q86TS7 SNORA40.3-201ENST00000390964 122 ntBASIC-3.33□□□□□ -2.94
LINC00643Q86TS7 HAR1A.1-201ENST00000459583 118 ntBASIC-3.33□□□□□ -2.94
LINC00643Q86TS7 Y_RNA.698-201ENST00000516798 118 ntBASIC-3.33□□□□□ -2.94
LINC00643Q86TS7 AC060788.1-201ENST00000521318 469 ntBASIC-3.33□□□□□ -2.94
LINC00643Q86TS7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-3.33□□□□□ -2.94
LINC00643Q86TS7 Y_RNA.55-201ENST00000362797 102 ntBASIC-3.34□□□□□ -2.94
LINC00643Q86TS7 Y_RNA.91-201ENST00000363042 107 ntBASIC-3.34□□□□□ -2.94
LINC00643Q86TS7 RNY1P11-201ENST00000363759 113 ntBASIC-3.34□□□□□ -2.94
LINC00643Q86TS7 SNORD27-201ENST00000363981 72 ntBASIC-3.34□□□□□ -2.94
LINC00643Q86TS7 Y_RNA.528-201ENST00000384575 108 ntBASIC-3.34□□□□□ -2.94
LINC00643Q86TS7 RNU6-1254P-201ENST00000391266 104 ntBASIC-3.34□□□□□ -2.94
LINC00643Q86TS7 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-3.34□□□□□ -2.94
LINC00643Q86TS7 Y_RNA.613-201ENST00000410726 97 ntBASIC-3.34□□□□□ -2.94
LINC00643Q86TS7 Y_RNA.677-201ENST00000516401 85 ntBASIC-3.34□□□□□ -2.94
LINC00643Q86TS7 Y_RNA.711-201ENST00000516993 102 ntBASIC-3.34□□□□□ -2.94
LINC00643Q86TS7 AL022161.1-201ENST00000604390 213 ntBASIC-3.34□□□□□ -2.94
LINC00643Q86TS7 AC005014.2-201ENST00000607795 599 ntBASIC-3.34□□□□□ -2.94
LINC00643Q86TS7 AC090617.8-201ENST00000623339 167 ntBASIC-3.34□□□□□ -2.94
LINC00643Q86TS7 RNU6-1059P-201ENST00000363752 98 ntBASIC-3.35□□□□□ -2.95
LINC00643Q86TS7 RNU6-243P-201ENST00000391140 107 ntBASIC-3.35□□□□□ -2.95
LINC00643Q86TS7 RNU6-370P-201ENST00000411008 104 ntBASIC-3.35□□□□□ -2.95
LINC00643Q86TS7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-3.35□□□□□ -2.95
LINC00643Q86TS7 AC083798.1-201ENST00000472671 131 ntBASIC-3.35□□□□□ -2.95
LINC00643Q86TS7 MTCO2P24-201ENST00000515611 426 ntBASIC-3.35□□□□□ -2.95
LINC00643Q86TS7 MRPS36P3-201ENST00000519284 130 ntBASIC-3.35□□□□□ -2.95
LINC00643Q86TS7 MIR4756-201ENST00000577874 78 ntBASIC-3.35□□□□□ -2.95
LINC00643Q86TS7 MIR367-201ENST00000362299 68 ntBASIC-3.36□□□□□ -2.95
LINC00643Q86TS7 Y_RNA.65-201ENST00000362846 100 ntBASIC-3.36□□□□□ -2.95
LINC00643Q86TS7 SNORD101-201ENST00000384027 73 ntBASIC-3.36□□□□□ -2.95
LINC00643Q86TS7 MIR181A1-201ENST00000385026 110 ntBASIC-3.36□□□□□ -2.95
LINC00643Q86TS7 AC113618.1-201ENST00000416747 285 ntBASIC-3.36□□□□□ -2.95
LINC00643Q86TS7 Y_RNA.674-201ENST00000516362 113 ntBASIC-3.36□□□□□ -2.95
LINC00643Q86TS7 MIR3145-201ENST00000580727 82 ntBASIC-3.36□□□□□ -2.95
Retrieved 100 of 98,524 protein–RNA pairs in 195.2 ms