Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LYSMD3Q7Z3D4 Y_RNA.532-201ENST00000384590 113 ntBASIC2.55□□□□□ -2
LYSMD3Q7Z3D4 MIR588-201ENST00000384900 83 ntBASIC2.55□□□□□ -2
LYSMD3Q7Z3D4 MIR653-201ENST00000385279 96 ntBASIC2.55□□□□□ -2
LYSMD3Q7Z3D4 RNU6-360P-201ENST00000390944 104 ntBASIC2.55□□□□□ -2
LYSMD3Q7Z3D4 SNORA18.5-201ENST00000516616 101 ntBASIC2.55□□□□□ -2
LYSMD3Q7Z3D4 SNORA31.17-201ENST00000516953 127 ntBASIC2.55□□□□□ -2
LYSMD3Q7Z3D4 RNU6-1015P-201ENST00000517121 99 ntBASIC2.55□□□□□ -2
LYSMD3Q7Z3D4 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.55□□□□□ -2
LYSMD3Q7Z3D4 DEFB122-202ENST00000569013 197 ntBASIC2.55□□□□□ -2
LYSMD3Q7Z3D4 MIR4536-1-201ENST00000583537 88 ntBASIC2.55□□□□□ -2
LYSMD3Q7Z3D4 MIR6817-201ENST00000615588 66 ntBASIC2.55□□□□□ -2
LYSMD3Q7Z3D4 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.55□□□□□ -2
LYSMD3Q7Z3D4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.55□□□□□ -2
LYSMD3Q7Z3D4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
LYSMD3Q7Z3D4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
LYSMD3Q7Z3D4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
LYSMD3Q7Z3D4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
LYSMD3Q7Z3D4 RNU1-51P-201ENST00000365345 176 ntBASIC2.54□□□□□ -2
LYSMD3Q7Z3D4 RNU6-322P-201ENST00000516010 103 ntBASIC2.54□□□□□ -2
LYSMD3Q7Z3D4 RNA5SP320-201ENST00000516263 124 ntBASIC2.54□□□□□ -2
LYSMD3Q7Z3D4 RNA5SP402-201ENST00000517148 110 ntBASIC2.54□□□□□ -2
LYSMD3Q7Z3D4 MIR3124-201ENST00000582636 67 ntBASIC2.54□□□□□ -2
LYSMD3Q7Z3D4 MIR4658-201ENST00000584344 65 ntBASIC2.54□□□□□ -2
LYSMD3Q7Z3D4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.54□□□□□ -2
LYSMD3Q7Z3D4 AL137847.3-201ENST00000611521 109 ntBASIC2.54□□□□□ -2
LYSMD3Q7Z3D4 U1.36-201ENST00000620684 176 ntBASIC2.54□□□□□ -2
LYSMD3Q7Z3D4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.53□□□□□ -2
LYSMD3Q7Z3D4 MIR563-201ENST00000385080 79 ntBASIC2.53□□□□□ -2
LYSMD3Q7Z3D4 HSPE1P24-201ENST00000450782 238 ntBASIC2.53□□□□□ -2
LYSMD3Q7Z3D4 RNU6-871P-201ENST00000516122 100 ntBASIC2.53□□□□□ -2
LYSMD3Q7Z3D4 RNA5SP148-201ENST00000516527 94 ntBASIC2.53□□□□□ -2
LYSMD3Q7Z3D4 RNU6-448P-201ENST00000517052 107 ntBASIC2.53□□□□□ -2
LYSMD3Q7Z3D4 MIR4484-201ENST00000582855 83 ntBASIC2.53□□□□□ -2
LYSMD3Q7Z3D4 AC104984.5-201ENST00000586878 94 ntBASIC2.53□□□□□ -2
LYSMD3Q7Z3D4 AL161722.3-201ENST00000605789 2983 ntBASIC2.53□□□□□ -2
LYSMD3Q7Z3D4 AC008163.1-202ENST00000636004 2889 ntBASIC2.52□□□□□ -2.01
LYSMD3Q7Z3D4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
LYSMD3Q7Z3D4 SNORD36A-201ENST00000362874 73 ntBASIC2.52□□□□□ -2.01
LYSMD3Q7Z3D4 RNU6-132P-201ENST00000383863 107 ntBASIC2.52□□□□□ -2.01
LYSMD3Q7Z3D4 MIR635-201ENST00000384830 98 ntBASIC2.52□□□□□ -2.01
LYSMD3Q7Z3D4 MIR5092-201ENST00000583139 88 ntBASIC2.52□□□□□ -2.01
LYSMD3Q7Z3D4 SNORA4-201ENST00000584302 138 ntBASIC2.52□□□□□ -2.01
LYSMD3Q7Z3D4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LYSMD3Q7Z3D4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
LYSMD3Q7Z3D4 RNA5SP48-201ENST00000363969 126 ntBASIC2.51□□□□□ -2.01
LYSMD3Q7Z3D4 MIR516A2-201ENST00000384888 90 ntBASIC2.51□□□□□ -2.01
LYSMD3Q7Z3D4 MIR194-1-201ENST00000384892 85 ntBASIC2.51□□□□□ -2.01
LYSMD3Q7Z3D4 MIR516A1-201ENST00000385033 90 ntBASIC2.51□□□□□ -2.01
LYSMD3Q7Z3D4 MIR27B-201ENST00000385129 97 ntBASIC2.51□□□□□ -2.01
LYSMD3Q7Z3D4 AC004965.1-201ENST00000413033 213 ntBASIC2.51□□□□□ -2.01
LYSMD3Q7Z3D4 RNU6-75P-201ENST00000515944 104 ntBASIC2.51□□□□□ -2.01
LYSMD3Q7Z3D4 SNORD111.1-201ENST00000516421 86 ntBASIC2.51□□□□□ -2.01
LYSMD3Q7Z3D4 MIR6740-201ENST00000618268 113 ntBASIC2.51□□□□□ -2.01
LYSMD3Q7Z3D4 FO624990.1-201ENST00000636373 85 ntBASIC2.51□□□□□ -2.01
LYSMD3Q7Z3D4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
LYSMD3Q7Z3D4 MIR3064-201ENST00000581130 66 ntBASIC2.5□□□□□ -2.01
LYSMD3Q7Z3D4 AC104996.3-201ENST00000590718 94 ntBASIC2.5□□□□□ -2.01
LYSMD3Q7Z3D4 AP000942.3-201ENST00000603702 160 ntBASIC2.5□□□□□ -2.01
LYSMD3Q7Z3D4 U4.3-201ENST00000621047 82 ntBASIC2.5□□□□□ -2.01
LYSMD3Q7Z3D4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
LYSMD3Q7Z3D4 MIR30D-201ENST00000362283 70 ntBASIC2.49□□□□□ -2.01
LYSMD3Q7Z3D4 Y_RNA.283-201ENST00000364798 112 ntBASIC2.49□□□□□ -2.01
LYSMD3Q7Z3D4 MIR520H-201ENST00000385126 88 ntBASIC2.49□□□□□ -2.01
LYSMD3Q7Z3D4 SNORD77.2-201ENST00000391045 68 ntBASIC2.49□□□□□ -2.01
LYSMD3Q7Z3D4 RNU6-1254P-201ENST00000391266 104 ntBASIC2.49□□□□□ -2.01
LYSMD3Q7Z3D4 MIR1302-7-201ENST00000408841 72 ntBASIC2.49□□□□□ -2.01
LYSMD3Q7Z3D4 AC125388.1-201ENST00000459631 156 ntBASIC2.49□□□□□ -2.01
LYSMD3Q7Z3D4 RNU6-70P-201ENST00000516438 60 ntBASIC2.49□□□□□ -2.01
LYSMD3Q7Z3D4 SNORA31.11-201ENST00000516528 139 ntBASIC2.49□□□□□ -2.01
LYSMD3Q7Z3D4 RNU6-807P-201ENST00000516805 107 ntBASIC2.49□□□□□ -2.01
LYSMD3Q7Z3D4 MIR3192-201ENST00000584920 77 ntBASIC2.49□□□□□ -2.01
LYSMD3Q7Z3D4 AL049779.4-201ENST00000604500 156 ntBASIC2.49□□□□□ -2.01
LYSMD3Q7Z3D4 AL096861.1-201ENST00000610899 123 ntBASIC2.49□□□□□ -2.01
LYSMD3Q7Z3D4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LYSMD3Q7Z3D4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LYSMD3Q7Z3D4 Y_RNA.340-201ENST00000365330 92 ntBASIC2.48□□□□□ -2.01
LYSMD3Q7Z3D4 RNU6-243P-201ENST00000391140 107 ntBASIC2.48□□□□□ -2.01
LYSMD3Q7Z3D4 RNA5SP270-201ENST00000411361 118 ntBASIC2.48□□□□□ -2.01
LYSMD3Q7Z3D4 RNU6-687P-201ENST00000516443 89 ntBASIC2.48□□□□□ -2.01
LYSMD3Q7Z3D4 AC121758.2-201ENST00000553271 193 ntBASIC2.48□□□□□ -2.01
LYSMD3Q7Z3D4 MIR1297-201ENST00000637311 77 ntBASIC2.48□□□□□ -2.01
LYSMD3Q7Z3D4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LYSMD3Q7Z3D4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LYSMD3Q7Z3D4 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
LYSMD3Q7Z3D4 RNA5SP456-201ENST00000364002 114 ntBASIC2.47□□□□□ -2.01
LYSMD3Q7Z3D4 SNORA70B-201ENST00000384210 135 ntBASIC2.47□□□□□ -2.01
LYSMD3Q7Z3D4 Y_RNA.491-201ENST00000384417 107 ntBASIC2.47□□□□□ -2.01
LYSMD3Q7Z3D4 SNORA67.4-201ENST00000384688 142 ntBASIC2.47□□□□□ -2.01
LYSMD3Q7Z3D4 SNORD41-201ENST00000386967 70 ntBASIC2.47□□□□□ -2.01
LYSMD3Q7Z3D4 RNA5SP450-201ENST00000411206 102 ntBASIC2.47□□□□□ -2.01
LYSMD3Q7Z3D4 AC008413.1-201ENST00000511864 177 ntBASIC2.47□□□□□ -2.01
LYSMD3Q7Z3D4 Y_RNA.681-201ENST00000516445 113 ntBASIC2.47□□□□□ -2.01
LYSMD3Q7Z3D4 AL357312.1-201ENST00000603879 298 ntBASIC2.47□□□□□ -2.01
LYSMD3Q7Z3D4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
LYSMD3Q7Z3D4 RNU6-1165P-201ENST00000410119 107 ntBASIC2.46□□□□□ -2.02
LYSMD3Q7Z3D4 RNA5SP24-201ENST00000516478 95 ntBASIC2.46□□□□□ -2.02
LYSMD3Q7Z3D4 SNORD53-201ENST00000579969 78 ntBASIC2.46□□□□□ -2.02
LYSMD3Q7Z3D4 MIR6715A-201ENST00000615929 79 ntBASIC2.46□□□□□ -2.02
LYSMD3Q7Z3D4 Y_RNA.264-201ENST00000364665 102 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 180.8 ms