Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
RNF43Q68DV7 Y_RNA.57-201ENST00000362806 113 ntBASIC2.37□□□□□ -2.03
RNF43Q68DV7 MIR1236-201ENST00000408340 102 ntBASIC2.37□□□□□ -2.03
RNF43Q68DV7 AL450471.1-201ENST00000447509 127 ntBASIC2.37□□□□□ -2.03
RNF43Q68DV7 AC004223.1-201ENST00000479840 271 ntBASIC2.37□□□□□ -2.03
RNF43Q68DV7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RNF43Q68DV7 RNU4-32P-201ENST00000363404 141 ntBASIC2.36□□□□□ -2.03
RNF43Q68DV7 RNY1P13-201ENST00000365030 105 ntBASIC2.36□□□□□ -2.03
RNF43Q68DV7 MIR1283-2-201ENST00000408621 87 ntBASIC2.36□□□□□ -2.03
RNF43Q68DV7 RNU7-26P-201ENST00000458980 63 ntBASIC2.36□□□□□ -2.03
RNF43Q68DV7 CYP3A52P-201ENST00000563326 91 ntBASIC2.36□□□□□ -2.03
RNF43Q68DV7 SNORD14A-201ENST00000606526 91 ntBASIC2.36□□□□□ -2.03
RNF43Q68DV7 Y_RNA.788-201ENST00000622394 112 ntBASIC2.36□□□□□ -2.03
RNF43Q68DV7 AC008133.2-201ENST00000624540 351 ntBASIC2.36□□□□□ -2.03
RNF43Q68DV7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
RNF43Q68DV7 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RNF43Q68DV7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
RNF43Q68DV7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
RNF43Q68DV7 RNA5SP133-201ENST00000363368 119 ntBASIC2.35□□□□□ -2.03
RNF43Q68DV7 RNU1-148P-201ENST00000384472 162 ntBASIC2.35□□□□□ -2.03
RNF43Q68DV7 SUMO1P4-201ENST00000429430 302 ntBASIC2.35□□□□□ -2.03
RNF43Q68DV7 SUB1P4-201ENST00000566062 339 ntBASIC2.35□□□□□ -2.03
RNF43Q68DV7 MIR7111-201ENST00000619751 72 ntBASIC2.35□□□□□ -2.03
RNF43Q68DV7 RNU6-1094P-201ENST00000362416 104 ntBASIC2.34□□□□□ -2.03
RNF43Q68DV7 AC019129.1-201ENST00000403786 261 ntBASIC2.34□□□□□ -2.03
RNF43Q68DV7 AC011753.1-201ENST00000451001 220 ntBASIC2.34□□□□□ -2.03
RNF43Q68DV7 SNORD4B-201ENST00000459083 72 ntBASIC2.34□□□□□ -2.03
RNF43Q68DV7 snoU13.27-201ENST00000459278 104 ntBASIC2.34□□□□□ -2.03
RNF43Q68DV7 AC079804.2-201ENST00000490376 200 ntBASIC2.34□□□□□ -2.03
RNF43Q68DV7 AC114801.3-201ENST00000510231 177 ntBASIC2.34□□□□□ -2.03
RNF43Q68DV7 RNU6-523P-201ENST00000516304 54 ntBASIC2.34□□□□□ -2.03
RNF43Q68DV7 MIR548AO-201ENST00000579992 96 ntBASIC2.34□□□□□ -2.03
RNF43Q68DV7 MIR4764-201ENST00000580680 88 ntBASIC2.34□□□□□ -2.03
RNF43Q68DV7 MIR5194-201ENST00000582634 120 ntBASIC2.34□□□□□ -2.03
RNF43Q68DV7 MIR6766-201ENST00000622641 72 ntBASIC2.34□□□□□ -2.03
RNF43Q68DV7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RNF43Q68DV7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RNF43Q68DV7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RNF43Q68DV7 HSBP1P2-201ENST00000299671 229 ntBASIC2.33□□□□□ -2.04
RNF43Q68DV7 MIR424-201ENST00000362227 98 ntBASIC2.33□□□□□ -2.04
RNF43Q68DV7 RNU6-624P-201ENST00000363411 107 ntBASIC2.33□□□□□ -2.04
RNF43Q68DV7 RNU6-112P-201ENST00000363599 104 ntBASIC2.33□□□□□ -2.04
RNF43Q68DV7 RNA5SP37-201ENST00000365420 130 ntBASIC2.33□□□□□ -2.04
RNF43Q68DV7 RNU6-296P-201ENST00000384608 107 ntBASIC2.33□□□□□ -2.04
RNF43Q68DV7 AL023284.1-201ENST00000403956 276 ntBASIC2.33□□□□□ -2.04
RNF43Q68DV7 RPS29P11-201ENST00000496507 171 ntBASIC2.33□□□□□ -2.04
RNF43Q68DV7 RNU7-43P-201ENST00000516554 64 ntBASIC2.33□□□□□ -2.04
RNF43Q68DV7 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.33□□□□□ -2.04
RNF43Q68DV7 AP000553.5-201ENST00000641933 54 ntBASIC2.33□□□□□ -2.04
RNF43Q68DV7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.33□□□□□ -2.04
RNF43Q68DV7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
RNF43Q68DV7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.32□□□□□ -2.04
RNF43Q68DV7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
RNF43Q68DV7 SNORA48.1-201ENST00000390879 135 ntBASIC2.32□□□□□ -2.04
RNF43Q68DV7 AC027119.1-201ENST00000440877 241 ntBASIC2.32□□□□□ -2.04
RNF43Q68DV7 AC133485.1-201ENST00000567176 124 ntBASIC2.32□□□□□ -2.04
RNF43Q68DV7 AC141846.1-201ENST00000568348 142 ntBASIC2.32□□□□□ -2.04
RNF43Q68DV7 MIR8066-201ENST00000617280 78 ntBASIC2.32□□□□□ -2.04
RNF43Q68DV7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RNF43Q68DV7 Y_RNA.226-201ENST00000364337 114 ntBASIC2.31□□□□□ -2.04
RNF43Q68DV7 SNORD38B-201ENST00000384690 67 ntBASIC2.31□□□□□ -2.04
RNF43Q68DV7 MIR520C-201ENST00000385005 87 ntBASIC2.31□□□□□ -2.04
RNF43Q68DV7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.31□□□□□ -2.04
RNF43Q68DV7 RNU4-83P-201ENST00000410863 133 ntBASIC2.31□□□□□ -2.04
RNF43Q68DV7 RNA5SP137-201ENST00000516833 135 ntBASIC2.31□□□□□ -2.04
RNF43Q68DV7 AC090897.1-201ENST00000580909 226 ntBASIC2.31□□□□□ -2.04
RNF43Q68DV7 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.31□□□□□ -2.04
RNF43Q68DV7 SNORD38B-202ENST00000625943 69 ntBASIC2.31□□□□□ -2.04
RNF43Q68DV7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RNF43Q68DV7 MIR518A2-201ENST00000384966 87 ntBASIC2.3□□□□□ -2.04
RNF43Q68DV7 RNA5SP465-201ENST00000391195 109 ntBASIC2.3□□□□□ -2.04
RNF43Q68DV7 RNA5SP237-201ENST00000410414 113 ntBASIC2.3□□□□□ -2.04
RNF43Q68DV7 RNA5SP501-201ENST00000410990 112 ntBASIC2.3□□□□□ -2.04
RNF43Q68DV7 RNU7-85P-201ENST00000458851 63 ntBASIC2.3□□□□□ -2.04
RNF43Q68DV7 snoU13.11-201ENST00000459219 104 ntBASIC2.3□□□□□ -2.04
RNF43Q68DV7 RNU6-917P-201ENST00000516294 104 ntBASIC2.3□□□□□ -2.04
RNF43Q68DV7 RNA5SP200-201ENST00000516360 103 ntBASIC2.3□□□□□ -2.04
RNF43Q68DV7 RNA5SP481-201ENST00000516814 122 ntBASIC2.3□□□□□ -2.04
RNF43Q68DV7 AP000942.3-201ENST00000603702 160 ntBASIC2.3□□□□□ -2.04
RNF43Q68DV7 MIR6895-201ENST00000613497 78 ntBASIC2.3□□□□□ -2.04
RNF43Q68DV7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
RNF43Q68DV7 ZNF355P-201ENST00000427301 3216 ntBASIC2.29□□□□□ -2.04
RNF43Q68DV7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RNF43Q68DV7 RNY1P2-201ENST00000364820 117 ntBASIC2.28□□□□□ -2.04
RNF43Q68DV7 Y_RNA.508-201ENST00000384502 114 ntBASIC2.28□□□□□ -2.04
RNF43Q68DV7 SNORA64-201ENST00000384674 134 ntBASIC2.28□□□□□ -2.04
RNF43Q68DV7 MIR221-201ENST00000385135 110 ntBASIC2.28□□□□□ -2.04
RNF43Q68DV7 SCARNA18B-201ENST00000458806 135 ntBASIC2.28□□□□□ -2.04
RNF43Q68DV7 RNA5SP445-201ENST00000515889 115 ntBASIC2.28□□□□□ -2.04
RNF43Q68DV7 RNU6-295P-201ENST00000516901 104 ntBASIC2.28□□□□□ -2.04
RNF43Q68DV7 AC121758.2-201ENST00000553271 193 ntBASIC2.28□□□□□ -2.04
RNF43Q68DV7 AP000753.3-201ENST00000604083 169 ntBASIC2.28□□□□□ -2.04
RNF43Q68DV7 AL512598.1-201ENST00000610158 273 ntBASIC2.28□□□□□ -2.04
RNF43Q68DV7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.28□□□□□ -2.04
RNF43Q68DV7 MIR4251-201ENST00000635819 61 ntBASIC2.28□□□□□ -2.04
RNF43Q68DV7 MIRLET7A1-201ENST00000362295 80 ntBASIC2.27□□□□□ -2.05
RNF43Q68DV7 RNU6-590P-201ENST00000365039 107 ntBASIC2.27□□□□□ -2.05
RNF43Q68DV7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
RNF43Q68DV7 SNRPGP12-201ENST00000449481 213 ntBASIC2.27□□□□□ -2.05
RNF43Q68DV7 RPS27P21-201ENST00000486977 252 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 192.1 ms