Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.74□□□□□ -2.13
E4F1Q66K89 AL662814.1-201ENST00000617364 121 ntBASIC1.74□□□□□ -2.13
E4F1Q66K89 MIR6516-201ENST00000630554 81 ntBASIC1.74□□□□□ -2.13
E4F1Q66K89 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.74□□□□□ -2.13
E4F1Q66K89 RNY3P2-201ENST00000362918 102 ntBASIC1.73□□□□□ -2.13
E4F1Q66K89 Y_RNA.78-201ENST00000362970 110 ntBASIC1.73□□□□□ -2.13
E4F1Q66K89 RNU6-654P-201ENST00000364373 107 ntBASIC1.73□□□□□ -2.13
E4F1Q66K89 RNY1P13-201ENST00000365030 105 ntBASIC1.73□□□□□ -2.13
E4F1Q66K89 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.73□□□□□ -2.13
E4F1Q66K89 AL353813.1-201ENST00000440700 253 ntBASIC1.73□□□□□ -2.13
E4F1Q66K89 RNU7-62P-201ENST00000458856 62 ntBASIC1.73□□□□□ -2.13
E4F1Q66K89 RNU6-904P-201ENST00000516206 101 ntBASIC1.73□□□□□ -2.13
E4F1Q66K89 RNA5SP170-201ENST00000517150 101 ntBASIC1.73□□□□□ -2.13
E4F1Q66K89 MIR4694-201ENST00000578534 80 ntBASIC1.73□□□□□ -2.13
E4F1Q66K89 MIR4255-201ENST00000579351 72 ntBASIC1.73□□□□□ -2.13
E4F1Q66K89 AP001318.4-201ENST00000616637 121 ntBASIC1.73□□□□□ -2.13
E4F1Q66K89 MIR6740-201ENST00000618268 113 ntBASIC1.73□□□□□ -2.13
E4F1Q66K89 RNU6-1099P-201ENST00000363533 107 ntBASIC1.72□□□□□ -2.13
E4F1Q66K89 Y_RNA.448-201ENST00000384185 108 ntBASIC1.72□□□□□ -2.13
E4F1Q66K89 RNU7-137P-201ENST00000516788 62 ntBASIC1.72□□□□□ -2.13
E4F1Q66K89 AP003716.2-201ENST00000528260 108 ntBASIC1.72□□□□□ -2.13
E4F1Q66K89 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.72□□□□□ -2.13
E4F1Q66K89 MIR3945-201ENST00000581853 98 ntBASIC1.72□□□□□ -2.13
E4F1Q66K89 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
E4F1Q66K89 RNU6-1298P-201ENST00000362456 101 ntBASIC1.71□□□□□ -2.14
E4F1Q66K89 RNU6-832P-201ENST00000363319 107 ntBASIC1.71□□□□□ -2.14
E4F1Q66K89 RNU6-1307P-201ENST00000391012 103 ntBASIC1.71□□□□□ -2.14
E4F1Q66K89 RNY4P30-201ENST00000410216 95 ntBASIC1.71□□□□□ -2.14
E4F1Q66K89 AC048334.1-201ENST00000477975 159 ntBASIC1.71□□□□□ -2.14
E4F1Q66K89 RNU11-2P-201ENST00000516898 142 ntBASIC1.71□□□□□ -2.14
E4F1Q66K89 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
E4F1Q66K89 SNORD114-10-201ENST00000363409 72 ntBASIC1.7□□□□□ -2.14
E4F1Q66K89 RNU6-865P-201ENST00000364772 107 ntBASIC1.7□□□□□ -2.14
E4F1Q66K89 Y_RNA.330-201ENST00000365230 109 ntBASIC1.7□□□□□ -2.14
E4F1Q66K89 Y_RNA.348-201ENST00000365403 103 ntBASIC1.7□□□□□ -2.14
E4F1Q66K89 MIR504-201ENST00000385065 83 ntBASIC1.7□□□□□ -2.14
E4F1Q66K89 MT-TN-201ENST00000387400 73 ntBASIC1.7□□□□□ -2.14
E4F1Q66K89 RNU6-1321P-201ENST00000390905 107 ntBASIC1.7□□□□□ -2.14
E4F1Q66K89 MIR1323-201ENST00000408090 73 ntBASIC1.7□□□□□ -2.14
E4F1Q66K89 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.7□□□□□ -2.14
E4F1Q66K89 AC245517.4-201ENST00000448601 281 ntBASIC1.7□□□□□ -2.14
E4F1Q66K89 SNORA40.13-201ENST00000516379 120 ntBASIC1.7□□□□□ -2.14
E4F1Q66K89 RNU6-1018P-201ENST00000516577 106 ntBASIC1.7□□□□□ -2.14
E4F1Q66K89 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.7□□□□□ -2.14
E4F1Q66K89 Y_RNA.818-201ENST00000618813 71 ntBASIC1.7□□□□□ -2.14
E4F1Q66K89 Y_RNA.10-201ENST00000362371 110 ntBASIC1.69□□□□□ -2.14
E4F1Q66K89 RNU6-1201P-201ENST00000384227 107 ntBASIC1.69□□□□□ -2.14
E4F1Q66K89 MIR934-201ENST00000401241 83 ntBASIC1.69□□□□□ -2.14
E4F1Q66K89 RNU6-1165P-201ENST00000410119 107 ntBASIC1.69□□□□□ -2.14
E4F1Q66K89 AC108729.3-201ENST00000513484 108 ntBASIC1.69□□□□□ -2.14
E4F1Q66K89 SNORA31.2-201ENST00000516019 134 ntBASIC1.69□□□□□ -2.14
E4F1Q66K89 SCARNA23-201ENST00000516060 130 ntBASIC1.69□□□□□ -2.14
E4F1Q66K89 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.69□□□□□ -2.14
E4F1Q66K89 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
E4F1Q66K89 RNU6-1313P-201ENST00000362622 102 ntBASIC1.68□□□□□ -2.14
E4F1Q66K89 RNU6-905P-201ENST00000384434 107 ntBASIC1.68□□□□□ -2.14
E4F1Q66K89 RNU6-613P-201ENST00000410412 108 ntBASIC1.68□□□□□ -2.14
E4F1Q66K89 Y_RNA.601-201ENST00000410500 113 ntBASIC1.68□□□□□ -2.14
E4F1Q66K89 Y_RNA.659-201ENST00000515994 113 ntBASIC1.68□□□□□ -2.14
E4F1Q66K89 RNU6-970P-201ENST00000516312 107 ntBASIC1.68□□□□□ -2.14
E4F1Q66K89 RNU6-902P-201ENST00000517212 91 ntBASIC1.68□□□□□ -2.14
E4F1Q66K89 AC133485.1-201ENST00000567176 124 ntBASIC1.68□□□□□ -2.14
E4F1Q66K89 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.68□□□□□ -2.14
E4F1Q66K89 AL442128.1-201ENST00000615151 90 ntBASIC1.68□□□□□ -2.14
E4F1Q66K89 Y_RNA.107-201ENST00000363190 121 ntBASIC1.67□□□□□ -2.14
E4F1Q66K89 RNU6-949P-201ENST00000384040 107 ntBASIC1.67□□□□□ -2.14
E4F1Q66K89 SNORA2B-201ENST00000384583 137 ntBASIC1.67□□□□□ -2.14
E4F1Q66K89 RNU6-997P-201ENST00000384725 107 ntBASIC1.67□□□□□ -2.14
E4F1Q66K89 RPS29P28-201ENST00000446439 141 ntBASIC1.67□□□□□ -2.14
E4F1Q66K89 RNU6-795P-201ENST00000516323 103 ntBASIC1.67□□□□□ -2.14
E4F1Q66K89 Y_RNA.694-201ENST00000516677 117 ntBASIC1.67□□□□□ -2.14
E4F1Q66K89 SNORA4-201ENST00000584302 138 ntBASIC1.67□□□□□ -2.14
E4F1Q66K89 AC096720.1-201ENST00000604441 183 ntBASIC1.67□□□□□ -2.14
E4F1Q66K89 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.67□□□□□ -2.14
E4F1Q66K89 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.67□□□□□ -2.14
E4F1Q66K89 RNU6-640P-201ENST00000363693 105 ntBASIC1.66□□□□□ -2.14
E4F1Q66K89 MIR34C-201ENST00000384831 77 ntBASIC1.66□□□□□ -2.14
E4F1Q66K89 MIR563-201ENST00000385080 79 ntBASIC1.66□□□□□ -2.14
E4F1Q66K89 MIR1261-201ENST00000408659 82 ntBASIC1.66□□□□□ -2.14
E4F1Q66K89 RNU7-48P-201ENST00000458875 63 ntBASIC1.66□□□□□ -2.14
E4F1Q66K89 UBL5P1-201ENST00000507979 193 ntBASIC1.66□□□□□ -2.14
E4F1Q66K89 RNA5SP61-201ENST00000516453 100 ntBASIC1.66□□□□□ -2.14
E4F1Q66K89 uc_338.6-201ENST00000613544 171 ntBASIC1.66□□□□□ -2.14
E4F1Q66K89 RNU6-447P-201ENST00000410293 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 RNU6-1118P-201ENST00000410382 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 RNU6-1076P-201ENST00000410397 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 RNU6-355P-201ENST00000410427 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 RNU6-791P-201ENST00000410467 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 RNU6-705P-201ENST00000410601 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 RNU6-1100P-201ENST00000410691 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 RNU6-860P-201ENST00000410860 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 RNU6-1217P-201ENST00000411276 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 RNU6-1054P-201ENST00000411293 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 RNU6-785P-201ENST00000411324 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 RNU6-295P-201ENST00000516901 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 U6.90-201ENST00000614007 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 MIR376B-201ENST00000614515 100 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 SEPT14P17-201ENST00000617978 177 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 U6.70-201ENST00000620287 104 ntBASIC1.65□□□□□ -2.15
E4F1Q66K89 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 215.6 ms