Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.52□□□□□ -2.65
VPS13DQ5THJ4 MTND3P16-201ENST00000452205 344 ntBASIC-1.52□□□□□ -2.65
VPS13DQ5THJ4 MIR23C-201ENST00000579846 100 ntBASIC-1.52□□□□□ -2.65
VPS13DQ5THJ4 U6.96-201ENST00000636425 70 ntBASIC-1.52□□□□□ -2.65
VPS13DQ5THJ4 RNU6-664P-201ENST00000362381 107 ntBASIC-1.52□□□□□ -2.65
VPS13DQ5THJ4 RNU5F-6P-201ENST00000362979 116 ntBASIC-1.52□□□□□ -2.65
VPS13DQ5THJ4 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.52□□□□□ -2.65
VPS13DQ5THJ4 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.52□□□□□ -2.65
VPS13DQ5THJ4 SNORD27.1-201ENST00000516319 72 ntBASIC-1.52□□□□□ -2.65
VPS13DQ5THJ4 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.52□□□□□ -2.65
VPS13DQ5THJ4 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.52□□□□□ -2.65
VPS13DQ5THJ4 AC087741.2-201ENST00000619415 172 ntBASIC-1.52□□□□□ -2.65
VPS13DQ5THJ4 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.52□□□□□ -2.65
VPS13DQ5THJ4 RNU6-715P-201ENST00000365204 103 ntBASIC-1.52□□□□□ -2.65
VPS13DQ5THJ4 MIR519A2-201ENST00000384990 87 ntBASIC-1.52□□□□□ -2.65
VPS13DQ5THJ4 U3.27-201ENST00000391237 200 ntBASIC-1.52□□□□□ -2.65
VPS13DQ5THJ4 MIR1278-201ENST00000408753 81 ntBASIC-1.52□□□□□ -2.65
VPS13DQ5THJ4 TPTE2P1-204ENST00000435256 593 ntBASIC-1.52□□□□□ -2.65
VPS13DQ5THJ4 RNU6-436P-201ENST00000516171 114 ntBASIC-1.52□□□□□ -2.65
VPS13DQ5THJ4 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.52□□□□□ -2.65
VPS13DQ5THJ4 Y_RNA.527-201ENST00000384573 102 ntBASIC-1.53□□□□□ -2.65
VPS13DQ5THJ4 SNORD77B-201ENST00000391112 67 ntBASIC-1.53□□□□□ -2.65
VPS13DQ5THJ4 MIR548AE2-201ENST00000583456 67 ntBASIC-1.53□□□□□ -2.65
VPS13DQ5THJ4 AL021707.8-201ENST00000609428 183 ntBASIC-1.53□□□□□ -2.65
VPS13DQ5THJ4 Y_RNA.243-201ENST00000364481 109 ntBASIC-1.53□□□□□ -2.65
VPS13DQ5THJ4 RPL35AP4-201ENST00000412007 102 ntBASIC-1.53□□□□□ -2.65
VPS13DQ5THJ4 AL353193.1-201ENST00000421444 268 ntBASIC-1.53□□□□□ -2.65
VPS13DQ5THJ4 RNU7-115P-201ENST00000516433 55 ntBASIC-1.53□□□□□ -2.65
VPS13DQ5THJ4 RNU6-365P-201ENST00000517113 106 ntBASIC-1.53□□□□□ -2.65
VPS13DQ5THJ4 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-1.53□□□□□ -2.65
VPS13DQ5THJ4 SNORD56.2-201ENST00000363242 71 ntBASIC-1.53□□□□□ -2.65
VPS13DQ5THJ4 RNU6-1242P-201ENST00000391052 103 ntBASIC-1.53□□□□□ -2.65
VPS13DQ5THJ4 RNU6-935P-201ENST00000410371 100 ntBASIC-1.53□□□□□ -2.65
VPS13DQ5THJ4 MIR2113-201ENST00000459007 91 ntBASIC-1.53□□□□□ -2.65
VPS13DQ5THJ4 MTND4LP25-201ENST00000570218 163 ntBASIC-1.53□□□□□ -2.65
VPS13DQ5THJ4 AL158063.1-201ENST00000615349 536 ntBASIC-1.53□□□□□ -2.65
VPS13DQ5THJ4 RNU6-1000P-201ENST00000391066 106 ntBASIC-1.54□□□□□ -2.66
VPS13DQ5THJ4 MIR1284-201ENST00000408337 120 ntBASIC-1.54□□□□□ -2.66
VPS13DQ5THJ4 MIR5188-201ENST00000583467 113 ntBASIC-1.54□□□□□ -2.66
VPS13DQ5THJ4 RNU6-1145P-201ENST00000384246 107 ntBASIC-1.54□□□□□ -2.66
VPS13DQ5THJ4 MTND3P21-201ENST00000433774 331 ntBASIC-1.54□□□□□ -2.66
VPS13DQ5THJ4 RNY1P16-201ENST00000363063 111 ntBASIC-1.54□□□□□ -2.66
VPS13DQ5THJ4 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.54□□□□□ -2.66
VPS13DQ5THJ4 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.54□□□□□ -2.66
VPS13DQ5THJ4 RNU6-861P-201ENST00000516745 106 ntBASIC-1.54□□□□□ -2.66
VPS13DQ5THJ4 AC092954.2-201ENST00000609103 430 ntBASIC-1.54□□□□□ -2.66
VPS13DQ5THJ4 RNU6-454P-201ENST00000364292 107 ntBASIC-1.54□□□□□ -2.66
VPS13DQ5THJ4 PCMTD1P1-201ENST00000455560 355 ntBASIC-1.54□□□□□ -2.66
VPS13DQ5THJ4 MRPS36P3-201ENST00000519284 130 ntBASIC-1.54□□□□□ -2.66
VPS13DQ5THJ4 MIR3129-201ENST00000581095 76 ntBASIC-1.54□□□□□ -2.66
VPS13DQ5THJ4 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.54□□□□□ -2.66
VPS13DQ5THJ4 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.55□□□□□ -2.66
VPS13DQ5THJ4 RNU6-899P-201ENST00000363947 107 ntBASIC-1.55□□□□□ -2.66
VPS13DQ5THJ4 SNORD115-48-201ENST00000364764 76 ntBASIC-1.55□□□□□ -2.66
VPS13DQ5THJ4 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.55□□□□□ -2.66
VPS13DQ5THJ4 RNU7-154P-201ENST00000516194 62 ntBASIC-1.55□□□□□ -2.66
VPS13DQ5THJ4 SCOCP1-201ENST00000554676 349 ntBASIC-1.55□□□□□ -2.66
VPS13DQ5THJ4 AL359880.1-201ENST00000621879 266 ntBASIC-1.55□□□□□ -2.66
VPS13DQ5THJ4 AC021613.1-201ENST00000623880 111 ntBASIC-1.55□□□□□ -2.66
VPS13DQ5THJ4 FGF7P2-201ENST00000332473 296 ntBASIC-1.55□□□□□ -2.66
VPS13DQ5THJ4 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.55□□□□□ -2.66
VPS13DQ5THJ4 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.55□□□□□ -2.66
VPS13DQ5THJ4 RNU6-201P-201ENST00000517100 61 ntBASIC-1.55□□□□□ -2.66
VPS13DQ5THJ4 AC022878.1-201ENST00000530684 149 ntBASIC-1.55□□□□□ -2.66
VPS13DQ5THJ4 Y_RNA.46-201ENST00000362695 102 ntBASIC-1.55□□□□□ -2.66
VPS13DQ5THJ4 MTND3P9-201ENST00000429526 346 ntBASIC-1.55□□□□□ -2.66
VPS13DQ5THJ4 RNU6-462P-201ENST00000362659 105 ntBASIC-1.56□□□□□ -2.66
VPS13DQ5THJ4 SNORD36A-201ENST00000362874 73 ntBASIC-1.56□□□□□ -2.66
VPS13DQ5THJ4 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.56□□□□□ -2.66
VPS13DQ5THJ4 RNY1P1-201ENST00000364372 112 ntBASIC-1.56□□□□□ -2.66
VPS13DQ5THJ4 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.56□□□□□ -2.66
VPS13DQ5THJ4 MIR548Q-201ENST00000408404 100 ntBASIC-1.56□□□□□ -2.66
VPS13DQ5THJ4 RNU6-757P-201ENST00000410334 100 ntBASIC-1.56□□□□□ -2.66
VPS13DQ5THJ4 MIR4696-201ENST00000581431 70 ntBASIC-1.56□□□□□ -2.66
VPS13DQ5THJ4 AC006504.6-201ENST00000590142 199 ntBASIC-1.56□□□□□ -2.66
VPS13DQ5THJ4 RNU6-260P-201ENST00000384092 107 ntBASIC-1.56□□□□□ -2.66
VPS13DQ5THJ4 RNU2-38P-201ENST00000410856 79 ntBASIC-1.56□□□□□ -2.66
VPS13DQ5THJ4 MTND2P3-201ENST00000452458 470 ntBASIC-1.56□□□□□ -2.66
VPS13DQ5THJ4 AL033528.1-201ENST00000453780 140 ntBASIC-1.56□□□□□ -2.66
VPS13DQ5THJ4 RNU7-70P-201ENST00000516941 66 ntBASIC-1.56□□□□□ -2.66
VPS13DQ5THJ4 SNORD115-32-201ENST00000364079 82 ntBASIC-1.56□□□□□ -2.66
VPS13DQ5THJ4 RNU6-903P-201ENST00000391270 109 ntBASIC-1.56□□□□□ -2.66
VPS13DQ5THJ4 AC091932.4-201ENST00000623386 200 ntBASIC-1.56□□□□□ -2.66
VPS13DQ5THJ4 RNU6-874P-201ENST00000362390 105 ntBASIC-1.56□□□□□ -2.66
VPS13DQ5THJ4 Y_RNA.192-201ENST00000363977 102 ntBASIC-1.56□□□□□ -2.66
VPS13DQ5THJ4 AL606923.1-201ENST00000406616 190 ntBASIC-1.56□□□□□ -2.66
VPS13DQ5THJ4 AL603910.2-201ENST00000407268 136 ntBASIC-1.56□□□□□ -2.66
VPS13DQ5THJ4 RNU2-69P-201ENST00000516061 100 ntBASIC-1.56□□□□□ -2.66
VPS13DQ5THJ4 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-1.56□□□□□ -2.66
VPS13DQ5THJ4 MTATP6P15-201ENST00000527233 835 ntBASIC-1.56□□□□□ -2.66
VPS13DQ5THJ4 MIR548W-201ENST00000581970 74 ntBASIC-1.56□□□□□ -2.66
VPS13DQ5THJ4 RNU6-1209P-201ENST00000363655 107 ntBASIC-1.57□□□□□ -2.66
VPS13DQ5THJ4 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.57□□□□□ -2.66
VPS13DQ5THJ4 MIR521-2-201ENST00000384818 87 ntBASIC-1.57□□□□□ -2.66
VPS13DQ5THJ4 RNU6-1225P-201ENST00000516336 65 ntBASIC-1.57□□□□□ -2.66
VPS13DQ5THJ4 RNU6-1003P-201ENST00000517099 105 ntBASIC-1.57□□□□□ -2.66
VPS13DQ5THJ4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.57□□□□□ -2.66
VPS13DQ5THJ4 RNU6-807P-201ENST00000516805 107 ntBASIC-1.57□□□□□ -2.66
VPS13DQ5THJ4 AC024909.2-201ENST00000553035 286 ntBASIC-1.57□□□□□ -2.66
VPS13DQ5THJ4 MIR379-201ENST00000362218 67 ntBASIC-1.57□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 222.6 ms