Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 AL136317.1-201ENST00000612653 226 ntBASIC0.92□□□□□ -2.26
RUNDC3AQ59EK9 RMST_2.1-201ENST00000617263 136 ntBASIC0.92□□□□□ -2.26
RUNDC3AQ59EK9 SNORD115-2-201ENST00000362842 82 ntBASIC0.91□□□□□ -2.26
RUNDC3AQ59EK9 RNU6-392P-201ENST00000364926 101 ntBASIC0.91□□□□□ -2.26
RUNDC3AQ59EK9 SNORD115-20-201ENST00000365099 82 ntBASIC0.91□□□□□ -2.26
RUNDC3AQ59EK9 RNU1-36P-201ENST00000365130 165 ntBASIC0.91□□□□□ -2.26
RUNDC3AQ59EK9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.91□□□□□ -2.26
RUNDC3AQ59EK9 Y_RNA.692-201ENST00000516627 105 ntBASIC0.91□□□□□ -2.26
RUNDC3AQ59EK9 AC004812.1-201ENST00000540773 146 ntBASIC0.91□□□□□ -2.26
RUNDC3AQ59EK9 MIR4804-201ENST00000581683 73 ntBASIC0.91□□□□□ -2.26
RUNDC3AQ59EK9 RNY1P10-201ENST00000363268 113 ntBASIC0.9□□□□□ -2.27
RUNDC3AQ59EK9 Y_RNA.531-201ENST00000384589 121 ntBASIC0.9□□□□□ -2.27
RUNDC3AQ59EK9 MIR605-201ENST00000385078 83 ntBASIC0.9□□□□□ -2.27
RUNDC3AQ59EK9 SNORD105-201ENST00000386910 85 ntBASIC0.9□□□□□ -2.27
RUNDC3AQ59EK9 MIR1257-201ENST00000408490 117 ntBASIC0.9□□□□□ -2.27
RUNDC3AQ59EK9 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.9□□□□□ -2.27
RUNDC3AQ59EK9 RNU6-977P-201ENST00000516411 103 ntBASIC0.9□□□□□ -2.27
RUNDC3AQ59EK9 RNA5SP33-201ENST00000516687 98 ntBASIC0.9□□□□□ -2.27
RUNDC3AQ59EK9 AC025627.3-201ENST00000582078 182 ntBASIC0.9□□□□□ -2.27
RUNDC3AQ59EK9 Y_RNA.280-201ENST00000364765 112 ntBASIC0.89□□□□□ -2.27
RUNDC3AQ59EK9 Y_RNA.294-201ENST00000364916 102 ntBASIC0.89□□□□□ -2.27
RUNDC3AQ59EK9 Y_RNA.298-201ENST00000364960 107 ntBASIC0.89□□□□□ -2.27
RUNDC3AQ59EK9 MIR520F-201ENST00000384824 87 ntBASIC0.89□□□□□ -2.27
RUNDC3AQ59EK9 ACA64.5-201ENST00000516207 127 ntBASIC0.89□□□□□ -2.27
RUNDC3AQ59EK9 RNU7-35P-201ENST00000517174 62 ntBASIC0.89□□□□□ -2.27
RUNDC3AQ59EK9 MIR548AE2-201ENST00000583456 67 ntBASIC0.89□□□□□ -2.27
RUNDC3AQ59EK9 AL353765.1-201ENST00000605514 183 ntBASIC0.89□□□□□ -2.27
RUNDC3AQ59EK9 AL137067.1-201ENST00000615933 120 ntBASIC0.89□□□□□ -2.27
RUNDC3AQ59EK9 Y_RNA.114-201ENST00000363265 113 ntBASIC0.88□□□□□ -2.27
RUNDC3AQ59EK9 RNY1P13-201ENST00000365030 105 ntBASIC0.88□□□□□ -2.27
RUNDC3AQ59EK9 RNU6-949P-201ENST00000384040 107 ntBASIC0.88□□□□□ -2.27
RUNDC3AQ59EK9 SNORA32-201ENST00000384072 121 ntBASIC0.88□□□□□ -2.27
RUNDC3AQ59EK9 MIR125B2-201ENST00000385128 89 ntBASIC0.88□□□□□ -2.27
RUNDC3AQ59EK9 U8.15-201ENST00000390947 134 ntBASIC0.88□□□□□ -2.27
RUNDC3AQ59EK9 SNORD99-201ENST00000408612 74 ntBASIC0.88□□□□□ -2.27
RUNDC3AQ59EK9 RNU6-1086P-201ENST00000410930 100 ntBASIC0.88□□□□□ -2.27
RUNDC3AQ59EK9 AC096949.1-201ENST00000412047 152 ntBASIC0.88□□□□□ -2.27
RUNDC3AQ59EK9 RNY4P20-201ENST00000516678 93 ntBASIC0.88□□□□□ -2.27
RUNDC3AQ59EK9 IGKV1-22-201ENST00000524313 326 ntBASIC0.88□□□□□ -2.27
RUNDC3AQ59EK9 U7.2-201ENST00000607576 63 ntBASIC0.88□□□□□ -2.27
RUNDC3AQ59EK9 MIR608-201ENST00000384820 100 ntBASIC0.87□□□□□ -2.27
RUNDC3AQ59EK9 RNU7-56P-201ENST00000458744 62 ntBASIC0.87□□□□□ -2.27
RUNDC3AQ59EK9 AC022523.2-201ENST00000561045 150 ntBASIC0.87□□□□□ -2.27
RUNDC3AQ59EK9 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
RUNDC3AQ59EK9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
RUNDC3AQ59EK9 Y_RNA.568-201ENST00000384742 113 ntBASIC0.86□□□□□ -2.27
RUNDC3AQ59EK9 MIR520H-201ENST00000385126 88 ntBASIC0.86□□□□□ -2.27
RUNDC3AQ59EK9 MIR938-201ENST00000401216 83 ntBASIC0.86□□□□□ -2.27
RUNDC3AQ59EK9 MTND4LP9-201ENST00000427694 174 ntBASIC0.86□□□□□ -2.27
RUNDC3AQ59EK9 MIR1270-201ENST00000459320 83 ntBASIC0.86□□□□□ -2.27
RUNDC3AQ59EK9 RNA5SP102-201ENST00000516865 106 ntBASIC0.86□□□□□ -2.27
RUNDC3AQ59EK9 MIR96-201ENST00000362288 78 ntBASIC0.85□□□□□ -2.27
RUNDC3AQ59EK9 Y_RNA.343-201ENST00000365354 112 ntBASIC0.85□□□□□ -2.27
RUNDC3AQ59EK9 RNU6-1062P-201ENST00000383908 107 ntBASIC0.85□□□□□ -2.27
RUNDC3AQ59EK9 SNORD93-201ENST00000408813 74 ntBASIC0.85□□□□□ -2.27
RUNDC3AQ59EK9 RPL39P25-201ENST00000449384 154 ntBASIC0.85□□□□□ -2.27
RUNDC3AQ59EK9 RNU7-79P-201ENST00000516082 62 ntBASIC0.85□□□□□ -2.27
RUNDC3AQ59EK9 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.85□□□□□ -2.27
RUNDC3AQ59EK9 AC008608.1-201ENST00000603910 127 ntBASIC0.85□□□□□ -2.27
RUNDC3AQ59EK9 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
RUNDC3AQ59EK9 RNU6-257P-201ENST00000410238 98 ntBASIC0.84□□□□□ -2.27
RUNDC3AQ59EK9 AC244098.3-201ENST00000424803 96 ntBASIC0.84□□□□□ -2.27
RUNDC3AQ59EK9 RNU7-102P-201ENST00000458948 62 ntBASIC0.84□□□□□ -2.27
RUNDC3AQ59EK9 RNU7-156P-201ENST00000517214 74 ntBASIC0.84□□□□□ -2.27
RUNDC3AQ59EK9 SNORD92-201ENST00000585078 85 ntBASIC0.84□□□□□ -2.27
RUNDC3AQ59EK9 AC211469.2-201ENST00000605461 205 ntBASIC0.84□□□□□ -2.27
RUNDC3AQ59EK9 MIR8070-201ENST00000616510 88 ntBASIC0.84□□□□□ -2.27
RUNDC3AQ59EK9 AL589743.1-201ENST00000551932 2712 ntBASIC0.84□□□□□ -2.28
RUNDC3AQ59EK9 RNU6-364P-201ENST00000384387 107 ntBASIC0.83□□□□□ -2.28
RUNDC3AQ59EK9 RNU6-1104P-201ENST00000384723 104 ntBASIC0.83□□□□□ -2.28
RUNDC3AQ59EK9 MIR573-201ENST00000384964 99 ntBASIC0.83□□□□□ -2.28
RUNDC3AQ59EK9 Y_RNA.588-201ENST00000391254 102 ntBASIC0.83□□□□□ -2.28
RUNDC3AQ59EK9 Y_RNA.676-201ENST00000516393 96 ntBASIC0.83□□□□□ -2.28
RUNDC3AQ59EK9 MIR8066-201ENST00000617280 78 ntBASIC0.83□□□□□ -2.28
RUNDC3AQ59EK9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
RUNDC3AQ59EK9 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
RUNDC3AQ59EK9 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
RUNDC3AQ59EK9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.82□□□□□ -2.28
RUNDC3AQ59EK9 RNU6-647P-201ENST00000364243 107 ntBASIC0.82□□□□□ -2.28
RUNDC3AQ59EK9 RNU1-119P-201ENST00000391122 165 ntBASIC0.82□□□□□ -2.28
RUNDC3AQ59EK9 RNU4-69P-201ENST00000410677 143 ntBASIC0.82□□□□□ -2.28
RUNDC3AQ59EK9 RNU4-83P-201ENST00000410863 133 ntBASIC0.82□□□□□ -2.28
RUNDC3AQ59EK9 AL158147.1-201ENST00000443970 75 ntBASIC0.82□□□□□ -2.28
RUNDC3AQ59EK9 PSMC1P5-201ENST00000512850 177 ntBASIC0.82□□□□□ -2.28
RUNDC3AQ59EK9 RN7SKP19-201ENST00000516016 252 ntBASIC0.82□□□□□ -2.28
RUNDC3AQ59EK9 MIR4698-201ENST00000577795 80 ntBASIC0.82□□□□□ -2.28
RUNDC3AQ59EK9 AC011195.1-201ENST00000578177 177 ntBASIC0.82□□□□□ -2.28
RUNDC3AQ59EK9 MIR3133-201ENST00000583157 78 ntBASIC0.82□□□□□ -2.28
RUNDC3AQ59EK9 AL359881.1-201ENST00000602916 267 ntBASIC0.82□□□□□ -2.28
RUNDC3AQ59EK9 AC013244.2-201ENST00000603396 103 ntBASIC0.82□□□□□ -2.28
RUNDC3AQ59EK9 Y_RNA.42-201ENST00000362660 108 ntBASIC0.81□□□□□ -2.28
RUNDC3AQ59EK9 RNU6-774P-201ENST00000363238 107 ntBASIC0.81□□□□□ -2.28
RUNDC3AQ59EK9 SNORA25.9-201ENST00000365087 128 ntBASIC0.81□□□□□ -2.28
RUNDC3AQ59EK9 MIR532-201ENST00000385025 91 ntBASIC0.81□□□□□ -2.28
RUNDC3AQ59EK9 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
RUNDC3AQ59EK9 SNORA40-201ENST00000388090 126 ntBASIC0.81□□□□□ -2.28
RUNDC3AQ59EK9 RNU6-447P-201ENST00000410293 104 ntBASIC0.81□□□□□ -2.28
RUNDC3AQ59EK9 RNU6-1118P-201ENST00000410382 104 ntBASIC0.81□□□□□ -2.28
RUNDC3AQ59EK9 RNU6-1076P-201ENST00000410397 104 ntBASIC0.81□□□□□ -2.28
RUNDC3AQ59EK9 RNU6-355P-201ENST00000410427 104 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 163.2 ms