Protein–RNA interactions for Protein: Q3SXY7

LRIT3, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3Q3SXY7 AC108740.1-201ENST00000498629 225 ntBASIC0.21□□□□□ -2.38
LRIT3Q3SXY7 RNU6-561P-201ENST00000516222 102 ntBASIC0.21□□□□□ -2.38
LRIT3Q3SXY7 SNORD116-25-201ENST00000516517 92 ntBASIC0.21□□□□□ -2.38
LRIT3Q3SXY7 AC133485.4-201ENST00000561835 220 ntBASIC0.21□□□□□ -2.38
LRIT3Q3SXY7 MIR4493-201ENST00000584016 73 ntBASIC0.21□□□□□ -2.38
LRIT3Q3SXY7 MIR8066-201ENST00000617280 78 ntBASIC0.21□□□□□ -2.38
LRIT3Q3SXY7 RNU6-349P-201ENST00000362402 107 ntBASIC0.2□□□□□ -2.38
LRIT3Q3SXY7 Y_RNA.42-201ENST00000362660 108 ntBASIC0.2□□□□□ -2.38
LRIT3Q3SXY7 RNU6-1099P-201ENST00000363533 107 ntBASIC0.2□□□□□ -2.38
LRIT3Q3SXY7 SNORD118-201ENST00000363593 134 ntBASIC0.2□□□□□ -2.38
LRIT3Q3SXY7 AL121914.1-201ENST00000450188 156 ntBASIC0.2□□□□□ -2.38
LRIT3Q3SXY7 RNU6-893P-201ENST00000458841 100 ntBASIC0.2□□□□□ -2.38
LRIT3Q3SXY7 RNU6-863P-201ENST00000515989 104 ntBASIC0.2□□□□□ -2.38
LRIT3Q3SXY7 Y_RNA.720-201ENST00000517166 92 ntBASIC0.2□□□□□ -2.38
LRIT3Q3SXY7 AC006504.6-201ENST00000590142 199 ntBASIC0.2□□□□□ -2.38
LRIT3Q3SXY7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
LRIT3Q3SXY7 Y_RNA.54-201ENST00000362766 105 ntBASIC0.19□□□□□ -2.38
LRIT3Q3SXY7 Y_RNA.352-201ENST00000365439 102 ntBASIC0.19□□□□□ -2.38
LRIT3Q3SXY7 Y_RNA.483-201ENST00000384380 101 ntBASIC0.19□□□□□ -2.38
LRIT3Q3SXY7 Y_RNA.515-201ENST00000384535 112 ntBASIC0.19□□□□□ -2.38
LRIT3Q3SXY7 MTATP8P1-201ENST00000467115 207 ntBASIC0.19□□□□□ -2.38
LRIT3Q3SXY7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.19□□□□□ -2.38
LRIT3Q3SXY7 AC141846.1-201ENST00000568348 142 ntBASIC0.19□□□□□ -2.38
LRIT3Q3SXY7 MIR4744-201ENST00000581563 82 ntBASIC0.19□□□□□ -2.38
LRIT3Q3SXY7 AL442067.1-201ENST00000613261 223 ntBASIC0.19□□□□□ -2.38
LRIT3Q3SXY7 AC021613.1-201ENST00000623880 111 ntBASIC0.19□□□□□ -2.38
LRIT3Q3SXY7 Y_RNA.13-201ENST00000362403 112 ntBASIC0.18□□□□□ -2.38
LRIT3Q3SXY7 SNORA22.1-201ENST00000362701 134 ntBASIC0.18□□□□□ -2.38
LRIT3Q3SXY7 Y_RNA.174-201ENST00000363781 105 ntBASIC0.18□□□□□ -2.38
LRIT3Q3SXY7 RNU6-597P-201ENST00000365620 102 ntBASIC0.18□□□□□ -2.38
LRIT3Q3SXY7 MT-TW-201ENST00000387382 68 ntBASIC0.18□□□□□ -2.38
LRIT3Q3SXY7 AL512326.2-201ENST00000426359 151 ntBASIC0.18□□□□□ -2.38
LRIT3Q3SXY7 RNU6-1153P-201ENST00000516760 105 ntBASIC0.18□□□□□ -2.38
LRIT3Q3SXY7 MIR6082-201ENST00000613604 109 ntBASIC0.18□□□□□ -2.38
LRIT3Q3SXY7 Y_RNA.488-201ENST00000384403 102 ntBASIC0.17□□□□□ -2.38
LRIT3Q3SXY7 SNORA72.6-201ENST00000384520 129 ntBASIC0.17□□□□□ -2.38
LRIT3Q3SXY7 Y_RNA.574-201ENST00000384766 95 ntBASIC0.17□□□□□ -2.38
LRIT3Q3SXY7 MIR604-201ENST00000384880 94 ntBASIC0.17□□□□□ -2.38
LRIT3Q3SXY7 U8.15-201ENST00000390947 134 ntBASIC0.17□□□□□ -2.38
LRIT3Q3SXY7 Y_RNA.617-201ENST00000410920 90 ntBASIC0.17□□□□□ -2.38
LRIT3Q3SXY7 AC104692.1-201ENST00000472406 90 ntBASIC0.17□□□□□ -2.38
LRIT3Q3SXY7 RNU6-135P-201ENST00000516769 101 ntBASIC0.17□□□□□ -2.38
LRIT3Q3SXY7 MIR4431-201ENST00000579990 94 ntBASIC0.17□□□□□ -2.38
LRIT3Q3SXY7 MIR378D2-201ENST00000580636 98 ntBASIC0.17□□□□□ -2.38
LRIT3Q3SXY7 SNORD114-31-201ENST00000363219 75 ntBASIC0.16□□□□□ -2.38
LRIT3Q3SXY7 MIR644A-201ENST00000385262 94 ntBASIC0.16□□□□□ -2.38
LRIT3Q3SXY7 RNU5E-9P-201ENST00000411164 104 ntBASIC0.16□□□□□ -2.38
LRIT3Q3SXY7 AC073261.1-201ENST00000429409 121 ntBASIC0.16□□□□□ -2.38
LRIT3Q3SXY7 RNA5SP67-201ENST00000516422 131 ntBASIC0.16□□□□□ -2.38
LRIT3Q3SXY7 RNU6-765P-201ENST00000516916 99 ntBASIC0.16□□□□□ -2.38
LRIT3Q3SXY7 AP001180.6-201ENST00000584918 159 ntBASIC0.16□□□□□ -2.38
LRIT3Q3SXY7 AC108676.2-201ENST00000605225 163 ntBASIC0.16□□□□□ -2.38
LRIT3Q3SXY7 MIR6841-201ENST00000637129 72 ntBASIC0.16□□□□□ -2.38
LRIT3Q3SXY7 RNU6-1229P-201ENST00000364295 107 ntBASIC0.15□□□□□ -2.39
LRIT3Q3SXY7 Y_RNA.277-201ENST00000364754 102 ntBASIC0.15□□□□□ -2.39
LRIT3Q3SXY7 Y_RNA.292-201ENST00000364904 97 ntBASIC0.15□□□□□ -2.39
LRIT3Q3SXY7 RNU6-949P-201ENST00000384040 107 ntBASIC0.15□□□□□ -2.39
LRIT3Q3SXY7 Y_RNA.552-201ENST00000384665 112 ntBASIC0.15□□□□□ -2.39
LRIT3Q3SXY7 RNU2-59P-201ENST00000410482 191 ntBASIC0.15□□□□□ -2.39
LRIT3Q3SXY7 AP003072.1-201ENST00000531740 145 ntBASIC0.15□□□□□ -2.39
LRIT3Q3SXY7 MIR4491-201ENST00000581087 68 ntBASIC0.15□□□□□ -2.39
LRIT3Q3SXY7 MIR371B-201ENST00000638082 66 ntBASIC0.15□□□□□ -2.39
LRIT3Q3SXY7 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.14□□□□□ -2.39
LRIT3Q3SXY7 SNORA18-201ENST00000384416 132 ntBASIC0.14□□□□□ -2.39
LRIT3Q3SXY7 RNU6-578P-201ENST00000390980 103 ntBASIC0.14□□□□□ -2.39
LRIT3Q3SXY7 Y_RNA.797-201ENST00000515977 94 ntBASIC0.14□□□□□ -2.39
LRIT3Q3SXY7 RNA5SP268-201ENST00000516828 124 ntBASIC0.14□□□□□ -2.39
LRIT3Q3SXY7 AC078938.1-201ENST00000620993 318 ntBASIC0.14□□□□□ -2.39
LRIT3Q3SXY7 RNU6-1160P-201ENST00000384546 104 ntBASIC0.13□□□□□ -2.39
LRIT3Q3SXY7 Y_RNA.571-201ENST00000384753 98 ntBASIC0.13□□□□□ -2.39
LRIT3Q3SXY7 MIR624-201ENST00000385217 97 ntBASIC0.13□□□□□ -2.39
LRIT3Q3SXY7 Y_RNA.588-201ENST00000391254 102 ntBASIC0.13□□□□□ -2.39
LRIT3Q3SXY7 MIR548H3-201ENST00000408771 118 ntBASIC0.13□□□□□ -2.39
LRIT3Q3SXY7 AC112693.2-201ENST00000556538 232 ntBASIC0.13□□□□□ -2.39
LRIT3Q3SXY7 MIR4643-201ENST00000577473 78 ntBASIC0.13□□□□□ -2.39
LRIT3Q3SXY7 MIR4315-1-201ENST00000636800 73 ntBASIC0.13□□□□□ -2.39
LRIT3Q3SXY7 MIR4315-2-201ENST00000640925 73 ntBASIC0.13□□□□□ -2.39
LRIT3Q3SXY7 SNORA36.1-201ENST00000363424 132 ntBASIC0.12□□□□□ -2.39
LRIT3Q3SXY7 SNORD95.1-201ENST00000364099 68 ntBASIC0.12□□□□□ -2.39
LRIT3Q3SXY7 RNU6-978P-201ENST00000364371 103 ntBASIC0.12□□□□□ -2.39
LRIT3Q3SXY7 Y_RNA.308-201ENST00000365043 101 ntBASIC0.12□□□□□ -2.39
LRIT3Q3SXY7 RNU6-472P-201ENST00000384299 107 ntBASIC0.12□□□□□ -2.39
LRIT3Q3SXY7 RNU4-70P-201ENST00000384579 139 ntBASIC0.12□□□□□ -2.39
LRIT3Q3SXY7 SNORA31.14-201ENST00000516728 116 ntBASIC0.12□□□□□ -2.39
LRIT3Q3SXY7 Y_RNA.697-201ENST00000516776 113 ntBASIC0.12□□□□□ -2.39
LRIT3Q3SXY7 RNU6-1149P-201ENST00000516810 97 ntBASIC0.12□□□□□ -2.39
LRIT3Q3SXY7 RNU2-4P-201ENST00000606190 192 ntBASIC0.12□□□□□ -2.39
LRIT3Q3SXY7 SNORA9.1-201ENST00000362412 131 ntBASIC0.11□□□□□ -2.39
LRIT3Q3SXY7 Y_RNA.32-201ENST00000362589 110 ntBASIC0.11□□□□□ -2.39
LRIT3Q3SXY7 Y_RNA.76-201ENST00000362931 109 ntBASIC0.11□□□□□ -2.39
LRIT3Q3SXY7 SNORA25.7-201ENST00000364375 127 ntBASIC0.11□□□□□ -2.39
LRIT3Q3SXY7 RNU4-16P-201ENST00000364737 141 ntBASIC0.11□□□□□ -2.39
LRIT3Q3SXY7 RNU6-815P-201ENST00000384080 113 ntBASIC0.11□□□□□ -2.39
LRIT3Q3SXY7 Y_RNA.536-201ENST00000384621 113 ntBASIC0.11□□□□□ -2.39
LRIT3Q3SXY7 RNU6-535P-201ENST00000384722 107 ntBASIC0.11□□□□□ -2.39
LRIT3Q3SXY7 Y_RNA.610-201ENST00000410681 103 ntBASIC0.11□□□□□ -2.39
LRIT3Q3SXY7 RNU6-1086P-201ENST00000410930 100 ntBASIC0.11□□□□□ -2.39
LRIT3Q3SXY7 AC069113.3-201ENST00000521019 150 ntBASIC0.11□□□□□ -2.39
LRIT3Q3SXY7 Y_RNA.121-201ENST00000363309 113 ntBASIC0.1□□□□□ -2.39
LRIT3Q3SXY7 SNORA63-201ENST00000363450 132 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 222.9 ms