Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 SNORA75.3-201ENST00000391231 150 ntBASIC0.91□□□□□ -2.26
SNAI3Q3KNW1 snoU13.2-201ENST00000459201 104 ntBASIC0.91□□□□□ -2.26
SNAI3Q3KNW1 SNORD79.1-201ENST00000516069 84 ntBASIC0.91□□□□□ -2.26
SNAI3Q3KNW1 SNORD33.1-201ENST00000516213 88 ntBASIC0.91□□□□□ -2.26
SNAI3Q3KNW1 snoU13.31-201ENST00000607291 104 ntBASIC0.91□□□□□ -2.26
SNAI3Q3KNW1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.91□□□□□ -2.26
SNAI3Q3KNW1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.9□□□□□ -2.27
SNAI3Q3KNW1 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
SNAI3Q3KNW1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
SNAI3Q3KNW1 MIR377-201ENST00000362145 69 ntBASIC0.9□□□□□ -2.27
SNAI3Q3KNW1 RNU6-1290P-201ENST00000362957 109 ntBASIC0.9□□□□□ -2.27
SNAI3Q3KNW1 Y_RNA.327-201ENST00000365201 102 ntBASIC0.9□□□□□ -2.27
SNAI3Q3KNW1 RNU6-342P-201ENST00000384521 104 ntBASIC0.9□□□□□ -2.27
SNAI3Q3KNW1 MIR563-201ENST00000385080 79 ntBASIC0.9□□□□□ -2.27
SNAI3Q3KNW1 RNU6-735P-201ENST00000410612 107 ntBASIC0.9□□□□□ -2.27
SNAI3Q3KNW1 RNU4-69P-201ENST00000410677 143 ntBASIC0.9□□□□□ -2.27
SNAI3Q3KNW1 RPS29P28-201ENST00000446439 141 ntBASIC0.9□□□□□ -2.27
SNAI3Q3KNW1 MIR1270-201ENST00000459320 83 ntBASIC0.9□□□□□ -2.27
SNAI3Q3KNW1 RNU7-21P-201ENST00000459430 62 ntBASIC0.9□□□□□ -2.27
SNAI3Q3KNW1 MIR548AE2-201ENST00000583456 67 ntBASIC0.9□□□□□ -2.27
SNAI3Q3KNW1 MIR4295-201ENST00000585286 85 ntBASIC0.9□□□□□ -2.27
SNAI3Q3KNW1 AP000753.3-201ENST00000604083 169 ntBASIC0.9□□□□□ -2.27
SNAI3Q3KNW1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
SNAI3Q3KNW1 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
SNAI3Q3KNW1 RNY4P6-201ENST00000363667 96 ntBASIC0.89□□□□□ -2.27
SNAI3Q3KNW1 Y_RNA.168-201ENST00000363740 102 ntBASIC0.89□□□□□ -2.27
SNAI3Q3KNW1 Y_RNA.273-201ENST00000364703 102 ntBASIC0.89□□□□□ -2.27
SNAI3Q3KNW1 SNORA18-201ENST00000384416 132 ntBASIC0.89□□□□□ -2.27
SNAI3Q3KNW1 SNORA80D-201ENST00000384488 135 ntBASIC0.89□□□□□ -2.27
SNAI3Q3KNW1 MIR588-201ENST00000384900 83 ntBASIC0.89□□□□□ -2.27
SNAI3Q3KNW1 MIR759-201ENST00000390224 91 ntBASIC0.89□□□□□ -2.27
SNAI3Q3KNW1 RNU6-205P-201ENST00000390858 107 ntBASIC0.89□□□□□ -2.27
SNAI3Q3KNW1 Y_RNA.629-201ENST00000411368 105 ntBASIC0.89□□□□□ -2.27
SNAI3Q3KNW1 AC063976.4-201ENST00000421971 163 ntBASIC0.89□□□□□ -2.27
SNAI3Q3KNW1 Y_RNA.649-201ENST00000459077 103 ntBASIC0.89□□□□□ -2.27
SNAI3Q3KNW1 RNU7-35P-201ENST00000517174 62 ntBASIC0.89□□□□□ -2.27
SNAI3Q3KNW1 MIR3163-201ENST00000581592 73 ntBASIC0.89□□□□□ -2.27
SNAI3Q3KNW1 AL670379.3-201ENST00000605040 251 ntBASIC0.89□□□□□ -2.27
SNAI3Q3KNW1 MIR6740-201ENST00000618268 113 ntBASIC0.89□□□□□ -2.27
SNAI3Q3KNW1 AC087741.2-201ENST00000619415 172 ntBASIC0.89□□□□□ -2.27
SNAI3Q3KNW1 RNU6-1144P-201ENST00000384247 104 ntBASIC0.88□□□□□ -2.27
SNAI3Q3KNW1 RNU6-476P-201ENST00000384726 107 ntBASIC0.88□□□□□ -2.27
SNAI3Q3KNW1 MIR548A3-201ENST00000385297 97 ntBASIC0.88□□□□□ -2.27
SNAI3Q3KNW1 RNA5SP95-201ENST00000410319 137 ntBASIC0.88□□□□□ -2.27
SNAI3Q3KNW1 RNU6-1064P-201ENST00000410626 104 ntBASIC0.88□□□□□ -2.27
SNAI3Q3KNW1 RNU6-1086P-201ENST00000410930 100 ntBASIC0.88□□□□□ -2.27
SNAI3Q3KNW1 AC002429.1-201ENST00000437672 148 ntBASIC0.88□□□□□ -2.27
SNAI3Q3KNW1 AC087343.1-201ENST00000477341 475 ntBASIC0.88□□□□□ -2.27
SNAI3Q3KNW1 UBL5P1-201ENST00000507979 193 ntBASIC0.88□□□□□ -2.27
SNAI3Q3KNW1 RNU7-6P-201ENST00000516845 62 ntBASIC0.88□□□□□ -2.27
SNAI3Q3KNW1 AC036111.3-201ENST00000526389 112 ntBASIC0.88□□□□□ -2.27
SNAI3Q3KNW1 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.88□□□□□ -2.27
SNAI3Q3KNW1 RNU4-38P-201ENST00000364472 129 ntBASIC0.87□□□□□ -2.27
SNAI3Q3KNW1 SNORD113.3-201ENST00000364630 78 ntBASIC0.87□□□□□ -2.27
SNAI3Q3KNW1 RNU6-1187P-201ENST00000364771 110 ntBASIC0.87□□□□□ -2.27
SNAI3Q3KNW1 Y_RNA.330-201ENST00000365230 109 ntBASIC0.87□□□□□ -2.27
SNAI3Q3KNW1 RNU6-1056P-201ENST00000383996 107 ntBASIC0.87□□□□□ -2.27
SNAI3Q3KNW1 SNORA32-201ENST00000384072 121 ntBASIC0.87□□□□□ -2.27
SNAI3Q3KNW1 RNU6-1237P-201ENST00000384777 107 ntBASIC0.87□□□□□ -2.27
SNAI3Q3KNW1 MIR19B1-201ENST00000384829 87 ntBASIC0.87□□□□□ -2.27
SNAI3Q3KNW1 MIR548A1-201ENST00000385041 97 ntBASIC0.87□□□□□ -2.27
SNAI3Q3KNW1 SNORD12-201ENST00000391002 90 ntBASIC0.87□□□□□ -2.27
SNAI3Q3KNW1 RNU7-62P-201ENST00000458856 62 ntBASIC0.87□□□□□ -2.27
SNAI3Q3KNW1 RNU7-90P-201ENST00000459216 62 ntBASIC0.87□□□□□ -2.27
SNAI3Q3KNW1 SNORD124-201ENST00000459577 104 ntBASIC0.87□□□□□ -2.27
SNAI3Q3KNW1 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.87□□□□□ -2.27
SNAI3Q3KNW1 RNU7-79P-201ENST00000516082 62 ntBASIC0.87□□□□□ -2.27
SNAI3Q3KNW1 AC007012.1-201ENST00000567192 175 ntBASIC0.87□□□□□ -2.27
SNAI3Q3KNW1 MIR4679-2-201ENST00000578358 77 ntBASIC0.87□□□□□ -2.27
SNAI3Q3KNW1 AL662814.1-201ENST00000617364 121 ntBASIC0.87□□□□□ -2.27
SNAI3Q3KNW1 AC012676.2-201ENST00000619258 186 ntBASIC0.87□□□□□ -2.27
SNAI3Q3KNW1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.87□□□□□ -2.27
SNAI3Q3KNW1 MIR30D-201ENST00000362283 70 ntBASIC0.86□□□□□ -2.27
SNAI3Q3KNW1 SNORD115-19-201ENST00000363098 82 ntBASIC0.86□□□□□ -2.27
SNAI3Q3KNW1 SNORD115-18-201ENST00000363293 82 ntBASIC0.86□□□□□ -2.27
SNAI3Q3KNW1 SNORD115-17-201ENST00000364612 82 ntBASIC0.86□□□□□ -2.27
SNAI3Q3KNW1 RNU6-429P-201ENST00000384582 108 ntBASIC0.86□□□□□ -2.27
SNAI3Q3KNW1 MIR548D2-201ENST00000384955 97 ntBASIC0.86□□□□□ -2.27
SNAI3Q3KNW1 SNORD111-201ENST00000408139 94 ntBASIC0.86□□□□□ -2.27
SNAI3Q3KNW1 RNU6-1165P-201ENST00000410119 107 ntBASIC0.86□□□□□ -2.27
SNAI3Q3KNW1 AC141846.1-201ENST00000568348 142 ntBASIC0.86□□□□□ -2.27
SNAI3Q3KNW1 MTND5P34-201ENST00000568888 325 ntBASIC0.86□□□□□ -2.27
SNAI3Q3KNW1 uc_338.6-201ENST00000613544 171 ntBASIC0.86□□□□□ -2.27
SNAI3Q3KNW1 AC106800.4-201ENST00000614905 153 ntBASIC0.86□□□□□ -2.27
SNAI3Q3KNW1 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.86□□□□□ -2.27
SNAI3Q3KNW1 RNY1P13-201ENST00000365030 105 ntBASIC0.85□□□□□ -2.27
SNAI3Q3KNW1 Y_RNA.344-201ENST00000365381 112 ntBASIC0.85□□□□□ -2.27
SNAI3Q3KNW1 SNORD116-21-201ENST00000384507 92 ntBASIC0.85□□□□□ -2.27
SNAI3Q3KNW1 SNORA2B-201ENST00000384583 137 ntBASIC0.85□□□□□ -2.27
SNAI3Q3KNW1 RNA5SP237-201ENST00000410414 113 ntBASIC0.85□□□□□ -2.27
SNAI3Q3KNW1 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.85□□□□□ -2.27
SNAI3Q3KNW1 AL359821.1-201ENST00000605519 182 ntBASIC0.85□□□□□ -2.27
SNAI3Q3KNW1 AC103810.9-201ENST00000606688 112 ntBASIC0.85□□□□□ -2.27
SNAI3Q3KNW1 Y_RNA.773-201ENST00000607168 90 ntBASIC0.85□□□□□ -2.27
SNAI3Q3KNW1 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.85□□□□□ -2.27
SNAI3Q3KNW1 AC008163.1-202ENST00000636004 2889 ntBASIC0.85□□□□□ -2.27
SNAI3Q3KNW1 AL391516.1-201ENST00000554380 2449 ntBASIC0.85□□□□□ -2.27
SNAI3Q3KNW1 Y_RNA.362-201ENST00000365518 110 ntBASIC0.84□□□□□ -2.27
SNAI3Q3KNW1 RNU6-949P-201ENST00000384040 107 ntBASIC0.84□□□□□ -2.27
SNAI3Q3KNW1 Y_RNA.549-201ENST00000384657 102 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 193.8 ms