Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MIR3678-201ENST00000578455 94 ntBASIC0.36□□□□□ -2.35
SHROOM1Q2M3G4 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.36□□□□□ -2.35
SHROOM1Q2M3G4 MIR3152-201ENST00000579801 74 ntBASIC0.36□□□□□ -2.35
SHROOM1Q2M3G4 MIR378D2-201ENST00000580636 98 ntBASIC0.36□□□□□ -2.35
SHROOM1Q2M3G4 SNORA25.18-201ENST00000607153 114 ntBASIC0.36□□□□□ -2.35
SHROOM1Q2M3G4 AL662814.1-201ENST00000617364 121 ntBASIC0.36□□□□□ -2.35
SHROOM1Q2M3G4 Y_RNA.121-201ENST00000363309 113 ntBASIC0.35□□□□□ -2.35
SHROOM1Q2M3G4 Y_RNA.182-201ENST00000363880 111 ntBASIC0.35□□□□□ -2.35
SHROOM1Q2M3G4 RNA5SP261-201ENST00000410536 106 ntBASIC0.35□□□□□ -2.35
SHROOM1Q2M3G4 RNU6-448P-201ENST00000517052 107 ntBASIC0.35□□□□□ -2.35
SHROOM1Q2M3G4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.35□□□□□ -2.35
SHROOM1Q2M3G4 MIR6841-201ENST00000637129 72 ntBASIC0.35□□□□□ -2.35
SHROOM1Q2M3G4 MIR103A1-201ENST00000362165 78 ntBASIC0.34□□□□□ -2.36
SHROOM1Q2M3G4 Y_RNA.13-201ENST00000362403 112 ntBASIC0.34□□□□□ -2.36
SHROOM1Q2M3G4 SNORA22.1-201ENST00000362701 134 ntBASIC0.34□□□□□ -2.36
SHROOM1Q2M3G4 MIR644A-201ENST00000385262 94 ntBASIC0.34□□□□□ -2.36
SHROOM1Q2M3G4 U8.15-201ENST00000390947 134 ntBASIC0.34□□□□□ -2.36
SHROOM1Q2M3G4 RNA5SP395-201ENST00000516567 118 ntBASIC0.34□□□□□ -2.36
SHROOM1Q2M3G4 RNU6-1149P-201ENST00000516810 97 ntBASIC0.34□□□□□ -2.36
SHROOM1Q2M3G4 SCARNA15-202ENST00000516881 127 ntBASIC0.34□□□□□ -2.36
SHROOM1Q2M3G4 RNA5SP94-201ENST00000516917 108 ntBASIC0.34□□□□□ -2.36
SHROOM1Q2M3G4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
SHROOM1Q2M3G4 AC133485.4-201ENST00000561835 220 ntBASIC0.34□□□□□ -2.36
SHROOM1Q2M3G4 MIR4308-201ENST00000580634 81 ntBASIC0.34□□□□□ -2.36
SHROOM1Q2M3G4 AC021613.1-201ENST00000623880 111 ntBASIC0.34□□□□□ -2.36
SHROOM1Q2M3G4 MIRLET7D-201ENST00000362263 87 ntBASIC0.33□□□□□ -2.36
SHROOM1Q2M3G4 Y_RNA.478-201ENST00000384358 107 ntBASIC0.33□□□□□ -2.36
SHROOM1Q2M3G4 SNORA72.6-201ENST00000384520 129 ntBASIC0.33□□□□□ -2.36
SHROOM1Q2M3G4 Y_RNA.626-201ENST00000411288 95 ntBASIC0.33□□□□□ -2.36
SHROOM1Q2M3G4 RNU6-327P-201ENST00000516270 127 ntBASIC0.33□□□□□ -2.36
SHROOM1Q2M3G4 SCARNA15.1-201ENST00000516384 125 ntBASIC0.33□□□□□ -2.36
SHROOM1Q2M3G4 AC141846.1-201ENST00000568348 142 ntBASIC0.33□□□□□ -2.36
SHROOM1Q2M3G4 MIR8066-201ENST00000617280 78 ntBASIC0.33□□□□□ -2.36
SHROOM1Q2M3G4 Y_RNA.350-201ENST00000365409 98 ntBASIC0.32□□□□□ -2.36
SHROOM1Q2M3G4 SNORA18-201ENST00000384416 132 ntBASIC0.32□□□□□ -2.36
SHROOM1Q2M3G4 Y_RNA.567-201ENST00000384736 106 ntBASIC0.32□□□□□ -2.36
SHROOM1Q2M3G4 Y_RNA.571-201ENST00000384753 98 ntBASIC0.32□□□□□ -2.36
SHROOM1Q2M3G4 MIR624-201ENST00000385217 97 ntBASIC0.32□□□□□ -2.36
SHROOM1Q2M3G4 MTND5P32-201ENST00000560711 1802 ntBASIC0.31□□□□□ -2.36
SHROOM1Q2M3G4 RNU6-1327P-201ENST00000365302 105 ntBASIC0.31□□□□□ -2.36
SHROOM1Q2M3G4 RNU6-643P-201ENST00000384018 107 ntBASIC0.31□□□□□ -2.36
SHROOM1Q2M3G4 Y_RNA.680-201ENST00000516441 93 ntBASIC0.31□□□□□ -2.36
SHROOM1Q2M3G4 RNU6-1258P-201ENST00000516911 111 ntBASIC0.31□□□□□ -2.36
SHROOM1Q2M3G4 MIR3128-201ENST00000581957 66 ntBASIC0.31□□□□□ -2.36
SHROOM1Q2M3G4 Y_RNA.42-201ENST00000362660 108 ntBASIC0.3□□□□□ -2.36
SHROOM1Q2M3G4 RNU4-67P-201ENST00000364569 141 ntBASIC0.3□□□□□ -2.36
SHROOM1Q2M3G4 RNU6-275P-201ENST00000364910 107 ntBASIC0.3□□□□□ -2.36
SHROOM1Q2M3G4 RNU4-70P-201ENST00000384579 139 ntBASIC0.3□□□□□ -2.36
SHROOM1Q2M3G4 MIR518A1-201ENST00000385068 85 ntBASIC0.3□□□□□ -2.36
SHROOM1Q2M3G4 MIR1302-3-201ENST00000408128 138 ntBASIC0.3□□□□□ -2.36
SHROOM1Q2M3G4 SNORA40.8-201ENST00000411034 126 ntBASIC0.3□□□□□ -2.36
SHROOM1Q2M3G4 AC096949.1-201ENST00000412047 152 ntBASIC0.3□□□□□ -2.36
SHROOM1Q2M3G4 RNU6-1045P-201ENST00000516321 107 ntBASIC0.3□□□□□ -2.36
SHROOM1Q2M3G4 MRPS18CP4-201ENST00000535821 231 ntBASIC0.3□□□□□ -2.36
SHROOM1Q2M3G4 MIR4491-201ENST00000581087 68 ntBASIC0.3□□□□□ -2.36
SHROOM1Q2M3G4 AC062037.2-201ENST00000610137 73 ntBASIC0.3□□□□□ -2.36
SHROOM1Q2M3G4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
SHROOM1Q2M3G4 Y_RNA.75-201ENST00000362927 97 ntBASIC0.29□□□□□ -2.36
SHROOM1Q2M3G4 Y_RNA.162-201ENST00000363683 102 ntBASIC0.29□□□□□ -2.36
SHROOM1Q2M3G4 Y_RNA.171-201ENST00000363760 102 ntBASIC0.29□□□□□ -2.36
SHROOM1Q2M3G4 Y_RNA.280-201ENST00000364765 112 ntBASIC0.29□□□□□ -2.36
SHROOM1Q2M3G4 Y_RNA.435-201ENST00000384095 112 ntBASIC0.29□□□□□ -2.36
SHROOM1Q2M3G4 Y_RNA.588-201ENST00000391254 102 ntBASIC0.29□□□□□ -2.36
SHROOM1Q2M3G4 AL118496.2-201ENST00000448300 230 ntBASIC0.29□□□□□ -2.36
SHROOM1Q2M3G4 RNU6-1023P-201ENST00000516137 106 ntBASIC0.29□□□□□ -2.36
SHROOM1Q2M3G4 RNU4-71P-201ENST00000516258 113 ntBASIC0.29□□□□□ -2.36
SHROOM1Q2M3G4 MIR4719-201ENST00000585233 84 ntBASIC0.29□□□□□ -2.36
SHROOM1Q2M3G4 U6.106-201ENST00000636360 105 ntBASIC0.29□□□□□ -2.36
SHROOM1Q2M3G4 SNORD44.1-201ENST00000363202 61 ntBASIC0.28□□□□□ -2.36
SHROOM1Q2M3G4 RNA5SP62-201ENST00000363457 110 ntBASIC0.28□□□□□ -2.36
SHROOM1Q2M3G4 SNORA8.2-201ENST00000384372 139 ntBASIC0.28□□□□□ -2.36
SHROOM1Q2M3G4 Y_RNA.521-201ENST00000384560 114 ntBASIC0.28□□□□□ -2.36
SHROOM1Q2M3G4 RNU6-918P-201ENST00000391219 106 ntBASIC0.28□□□□□ -2.36
SHROOM1Q2M3G4 SNORD71-201ENST00000411292 86 ntBASIC0.28□□□□□ -2.36
SHROOM1Q2M3G4 SNORA25.16-201ENST00000516741 121 ntBASIC0.28□□□□□ -2.36
SHROOM1Q2M3G4 MIR6082-201ENST00000613604 109 ntBASIC0.28□□□□□ -2.36
SHROOM1Q2M3G4 U4.1-201ENST00000620349 87 ntBASIC0.28□□□□□ -2.36
SHROOM1Q2M3G4 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.28□□□□□ -2.37
SHROOM1Q2M3G4 Y_RNA.60-201ENST00000362831 98 ntBASIC0.27□□□□□ -2.37
SHROOM1Q2M3G4 Y_RNA.412-201ENST00000384001 104 ntBASIC0.27□□□□□ -2.37
SHROOM1Q2M3G4 SNRPGP12-201ENST00000449481 213 ntBASIC0.27□□□□□ -2.37
SHROOM1Q2M3G4 RNU6-469P-201ENST00000516253 101 ntBASIC0.27□□□□□ -2.37
SHROOM1Q2M3G4 RNU6-111P-201ENST00000517179 105 ntBASIC0.27□□□□□ -2.37
SHROOM1Q2M3G4 AP003327.1-201ENST00000529684 127 ntBASIC0.27□□□□□ -2.37
SHROOM1Q2M3G4 AC022523.2-201ENST00000561045 150 ntBASIC0.27□□□□□ -2.37
SHROOM1Q2M3G4 MTND5P34-201ENST00000568888 325 ntBASIC0.27□□□□□ -2.37
SHROOM1Q2M3G4 Y_RNA.757-201ENST00000578934 114 ntBASIC0.27□□□□□ -2.37
SHROOM1Q2M3G4 Y_RNA.32-201ENST00000362589 110 ntBASIC0.26□□□□□ -2.37
SHROOM1Q2M3G4 SNORA36.1-201ENST00000363424 132 ntBASIC0.26□□□□□ -2.37
SHROOM1Q2M3G4 SNORA25.7-201ENST00000364375 127 ntBASIC0.26□□□□□ -2.37
SHROOM1Q2M3G4 RNY1P13-201ENST00000365030 105 ntBASIC0.26□□□□□ -2.37
SHROOM1Q2M3G4 RNU6-949P-201ENST00000384040 107 ntBASIC0.26□□□□□ -2.37
SHROOM1Q2M3G4 Y_RNA.447-201ENST00000384184 113 ntBASIC0.26□□□□□ -2.37
SHROOM1Q2M3G4 RNU6-1086P-201ENST00000410930 100 ntBASIC0.26□□□□□ -2.37
SHROOM1Q2M3G4 MTND3P2-201ENST00000438452 342 ntBASIC0.26□□□□□ -2.37
SHROOM1Q2M3G4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.26□□□□□ -2.37
SHROOM1Q2M3G4 SNORA31.14-201ENST00000516728 116 ntBASIC0.26□□□□□ -2.37
SHROOM1Q2M3G4 MIR4431-201ENST00000579990 94 ntBASIC0.26□□□□□ -2.37
SHROOM1Q2M3G4 MIR4503-201ENST00000582187 83 ntBASIC0.26□□□□□ -2.37
SHROOM1Q2M3G4 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 184.5 ms