Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 RNU6-1237P-201ENST00000384777 107 ntBASIC1.59□□□□□ -2.15
SSRP1Q08945 MIR222-201ENST00000384992 110 ntBASIC1.59□□□□□ -2.15
SSRP1Q08945 MIR563-201ENST00000385080 79 ntBASIC1.59□□□□□ -2.15
SSRP1Q08945 RNU7-6P-201ENST00000516845 62 ntBASIC1.59□□□□□ -2.15
SSRP1Q08945 RNU7-35P-201ENST00000517174 62 ntBASIC1.59□□□□□ -2.15
SSRP1Q08945 MTND5P34-201ENST00000568888 325 ntBASIC1.59□□□□□ -2.15
SSRP1Q08945 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.59□□□□□ -2.15
SSRP1Q08945 AL662814.1-201ENST00000617364 121 ntBASIC1.59□□□□□ -2.15
SSRP1Q08945 MIR7111-201ENST00000619751 72 ntBASIC1.59□□□□□ -2.15
SSRP1Q08945 RNU6-476P-201ENST00000384726 107 ntBASIC1.58□□□□□ -2.16
SSRP1Q08945 SNORD77B-201ENST00000391112 67 ntBASIC1.58□□□□□ -2.16
SSRP1Q08945 RNU6-1165P-201ENST00000410119 107 ntBASIC1.58□□□□□ -2.16
SSRP1Q08945 RNU6-735P-201ENST00000410612 107 ntBASIC1.58□□□□□ -2.16
SSRP1Q08945 RNU6-1064P-201ENST00000410626 104 ntBASIC1.58□□□□□ -2.16
SSRP1Q08945 Y_RNA.629-201ENST00000411368 105 ntBASIC1.58□□□□□ -2.16
SSRP1Q08945 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.58□□□□□ -2.16
SSRP1Q08945 RNU1-92P-201ENST00000517017 135 ntBASIC1.58□□□□□ -2.16
SSRP1Q08945 RNU6-1056P-201ENST00000383996 107 ntBASIC1.57□□□□□ -2.16
SSRP1Q08945 RNU6-1144P-201ENST00000384247 104 ntBASIC1.57□□□□□ -2.16
SSRP1Q08945 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
SSRP1Q08945 RNU6-1086P-201ENST00000410930 100 ntBASIC1.57□□□□□ -2.16
SSRP1Q08945 AC036111.3-201ENST00000526389 112 ntBASIC1.57□□□□□ -2.16
SSRP1Q08945 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.57□□□□□ -2.16
SSRP1Q08945 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.56□□□□□ -2.16
SSRP1Q08945 AC008163.1-202ENST00000636004 2889 ntBASIC1.56□□□□□ -2.16
SSRP1Q08945 MIR499A-201ENST00000384903 122 ntBASIC1.56□□□□□ -2.16
SSRP1Q08945 RNU1-98P-201ENST00000458992 160 ntBASIC1.56□□□□□ -2.16
SSRP1Q08945 AC141846.1-201ENST00000568348 142 ntBASIC1.56□□□□□ -2.16
SSRP1Q08945 AC106800.4-201ENST00000614905 153 ntBASIC1.56□□□□□ -2.16
SSRP1Q08945 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.56□□□□□ -2.16
SSRP1Q08945 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.56□□□□□ -2.16
SSRP1Q08945 RNU6-1290P-201ENST00000362957 109 ntBASIC1.55□□□□□ -2.16
SSRP1Q08945 SNORA25.9-201ENST00000365087 128 ntBASIC1.55□□□□□ -2.16
SSRP1Q08945 MIR548D2-201ENST00000384955 97 ntBASIC1.55□□□□□ -2.16
SSRP1Q08945 SNORD111-201ENST00000408139 94 ntBASIC1.55□□□□□ -2.16
SSRP1Q08945 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.55□□□□□ -2.16
SSRP1Q08945 RPS29P23-201ENST00000458635 123 ntBASIC1.55□□□□□ -2.16
SSRP1Q08945 RNU7-79P-201ENST00000516082 62 ntBASIC1.55□□□□□ -2.16
SSRP1Q08945 AC023827.1-201ENST00000569247 97 ntBASIC1.55□□□□□ -2.16
SSRP1Q08945 AC012676.2-201ENST00000619258 186 ntBASIC1.55□□□□□ -2.16
SSRP1Q08945 AC087741.2-201ENST00000619415 172 ntBASIC1.55□□□□□ -2.16
SSRP1Q08945 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SSRP1Q08945 MIR548A1-201ENST00000385041 97 ntBASIC1.54□□□□□ -2.16
SSRP1Q08945 MT-TF-201ENST00000387314 71 ntBASIC1.54□□□□□ -2.16
SSRP1Q08945 MIR758-201ENST00000390227 88 ntBASIC1.54□□□□□ -2.16
SSRP1Q08945 AC063976.4-201ENST00000421971 163 ntBASIC1.54□□□□□ -2.16
SSRP1Q08945 RNU1-123P-201ENST00000458950 160 ntBASIC1.54□□□□□ -2.16
SSRP1Q08945 MIR1270-201ENST00000459320 83 ntBASIC1.54□□□□□ -2.16
SSRP1Q08945 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.54□□□□□ -2.16
SSRP1Q08945 AC007012.1-201ENST00000567192 175 ntBASIC1.54□□□□□ -2.16
SSRP1Q08945 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SSRP1Q08945 MIR30D-201ENST00000362283 70 ntBASIC1.53□□□□□ -2.16
SSRP1Q08945 SNORD115-19-201ENST00000363098 82 ntBASIC1.53□□□□□ -2.16
SSRP1Q08945 SNORD115-18-201ENST00000363293 82 ntBASIC1.53□□□□□ -2.16
SSRP1Q08945 SNORD115-17-201ENST00000364612 82 ntBASIC1.53□□□□□ -2.16
SSRP1Q08945 SNORD116-21-201ENST00000384507 92 ntBASIC1.53□□□□□ -2.16
SSRP1Q08945 MIR18B-201ENST00000454574 71 ntBASIC1.53□□□□□ -2.16
SSRP1Q08945 SNORA4-201ENST00000584302 138 ntBASIC1.53□□□□□ -2.16
SSRP1Q08945 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SSRP1Q08945 uc_338.6-201ENST00000613544 171 ntBASIC1.53□□□□□ -2.16
SSRP1Q08945 AC027335.2-201ENST00000624030 375 ntBASIC1.53□□□□□ -2.16
SSRP1Q08945 RNY1P13-201ENST00000365030 105 ntBASIC1.52□□□□□ -2.17
SSRP1Q08945 Y_RNA.327-201ENST00000365201 102 ntBASIC1.52□□□□□ -2.17
SSRP1Q08945 RNU6-880P-201ENST00000384526 107 ntBASIC1.52□□□□□ -2.17
SSRP1Q08945 AC002429.1-201ENST00000437672 148 ntBASIC1.52□□□□□ -2.17
SSRP1Q08945 AC019288.1-201ENST00000557918 224 ntBASIC1.52□□□□□ -2.17
SSRP1Q08945 MIR4421-201ENST00000578133 69 ntBASIC1.52□□□□□ -2.17
SSRP1Q08945 MIR4679-2-201ENST00000578358 77 ntBASIC1.52□□□□□ -2.17
SSRP1Q08945 FAM71BP1-201ENST00000604431 523 ntBASIC1.52□□□□□ -2.17
SSRP1Q08945 MIR7974-201ENST00000615835 79 ntBASIC1.52□□□□□ -2.17
SSRP1Q08945 Y_RNA.362-201ENST00000365518 110 ntBASIC1.51□□□□□ -2.17
SSRP1Q08945 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.51□□□□□ -2.17
SSRP1Q08945 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.51□□□□□ -2.17
SSRP1Q08945 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SSRP1Q08945 Y_RNA.118-201ENST00000363300 101 ntBASIC1.5□□□□□ -2.17
SSRP1Q08945 Y_RNA.344-201ENST00000365381 112 ntBASIC1.5□□□□□ -2.17
SSRP1Q08945 RNU6-949P-201ENST00000384040 107 ntBASIC1.5□□□□□ -2.17
SSRP1Q08945 Y_RNA.508-201ENST00000384502 114 ntBASIC1.5□□□□□ -2.17
SSRP1Q08945 RPL39P25-201ENST00000449384 154 ntBASIC1.5□□□□□ -2.17
SSRP1Q08945 AC068338.1-201ENST00000565567 176 ntBASIC1.5□□□□□ -2.17
SSRP1Q08945 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SSRP1Q08945 MIR26B-201ENST00000362251 77 ntBASIC1.49□□□□□ -2.17
SSRP1Q08945 Y_RNA.35-201ENST00000362601 101 ntBASIC1.49□□□□□ -2.17
SSRP1Q08945 Y_RNA.355-201ENST00000365462 98 ntBASIC1.49□□□□□ -2.17
SSRP1Q08945 RNU6-616P-201ENST00000384353 107 ntBASIC1.49□□□□□ -2.17
SSRP1Q08945 snoU13.21-201ENST00000459368 105 ntBASIC1.49□□□□□ -2.17
SSRP1Q08945 AC004223.1-201ENST00000479840 271 ntBASIC1.49□□□□□ -2.17
SSRP1Q08945 RNU6-94P-201ENST00000607728 107 ntBASIC1.49□□□□□ -2.17
SSRP1Q08945 MIR6129-201ENST00000616087 109 ntBASIC1.49□□□□□ -2.17
SSRP1Q08945 AL035470.1-201ENST00000622571 220 ntBASIC1.49□□□□□ -2.17
SSRP1Q08945 SNORD114-10-201ENST00000363409 72 ntBASIC1.48□□□□□ -2.17
SSRP1Q08945 SNORA7.1-201ENST00000363750 139 ntBASIC1.48□□□□□ -2.17
SSRP1Q08945 SNORA25.8-201ENST00000364831 128 ntBASIC1.48□□□□□ -2.17
SSRP1Q08945 RNU6-994P-201ENST00000410507 111 ntBASIC1.48□□□□□ -2.17
SSRP1Q08945 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.48□□□□□ -2.17
SSRP1Q08945 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.48□□□□□ -2.17
SSRP1Q08945 SNORD67.1-201ENST00000516618 108 ntBASIC1.48□□□□□ -2.17
SSRP1Q08945 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.48□□□□□ -2.17
SSRP1Q08945 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.48□□□□□ -2.17
SSRP1Q08945 Y_RNA.773-201ENST00000607168 90 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms