Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 SNORD67.1-201ENST00000516618 108 ntBASIC-0.42□□□□□ -2.48
HOXC5Q00444 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.42□□□□□ -2.48
HOXC5Q00444 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.42□□□□□ -2.48
HOXC5Q00444 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.42□□□□□ -2.48
HOXC5Q00444 AC090574.1-201ENST00000623186 233 ntBASIC-0.42□□□□□ -2.48
HOXC5Q00444 AL162726.3-218ENST00000636401 95 ntBASIC-0.42□□□□□ -2.48
HOXC5Q00444 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.43□□□□□ -2.48
HOXC5Q00444 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.43□□□□□ -2.48
HOXC5Q00444 SNORD114-11-201ENST00000363738 75 ntBASIC-0.43□□□□□ -2.48
HOXC5Q00444 SNORA63.7-201ENST00000365579 123 ntBASIC-0.43□□□□□ -2.48
HOXC5Q00444 MIR196A2-201ENST00000385189 110 ntBASIC-0.43□□□□□ -2.48
HOXC5Q00444 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.43□□□□□ -2.48
HOXC5Q00444 RNA5SP144-201ENST00000410846 116 ntBASIC-0.43□□□□□ -2.48
HOXC5Q00444 AC138393.2-201ENST00000414742 246 ntBASIC-0.43□□□□□ -2.48
HOXC5Q00444 AC082651.2-201ENST00000496833 166 ntBASIC-0.43□□□□□ -2.48
HOXC5Q00444 TRAJ51-201ENST00000504127 63 ntBASIC-0.43□□□□□ -2.48
HOXC5Q00444 RNA5SP480-201ENST00000516840 109 ntBASIC-0.43□□□□□ -2.48
HOXC5Q00444 AC098479.1-201ENST00000609225 154 ntBASIC-0.43□□□□□ -2.48
HOXC5Q00444 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.44□□□□□ -2.48
HOXC5Q00444 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.44□□□□□ -2.48
HOXC5Q00444 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.44□□□□□ -2.48
HOXC5Q00444 RNU6-450P-201ENST00000364654 107 ntBASIC-0.44□□□□□ -2.48
HOXC5Q00444 SNORA32-201ENST00000384072 121 ntBASIC-0.44□□□□□ -2.48
HOXC5Q00444 MIR599-201ENST00000385069 95 ntBASIC-0.44□□□□□ -2.48
HOXC5Q00444 MIR516B1-201ENST00000385211 90 ntBASIC-0.44□□□□□ -2.48
HOXC5Q00444 MIR616-201ENST00000385293 97 ntBASIC-0.44□□□□□ -2.48
HOXC5Q00444 SNORA53-201ENST00000391141 249 ntBASIC-0.44□□□□□ -2.48
HOXC5Q00444 AC097635.1-201ENST00000450678 155 ntBASIC-0.44□□□□□ -2.48
HOXC5Q00444 FGF7P4-201ENST00000509595 295 ntBASIC-0.44□□□□□ -2.48
HOXC5Q00444 MIR548H5-201ENST00000580314 60 ntBASIC-0.44□□□□□ -2.48
HOXC5Q00444 AL109933.3-201ENST00000619095 188 ntBASIC-0.44□□□□□ -2.48
HOXC5Q00444 MIR7111-201ENST00000619751 72 ntBASIC-0.44□□□□□ -2.48
HOXC5Q00444 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.44□□□□□ -2.48
HOXC5Q00444 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 SNORD115-2-201ENST00000362842 82 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 RNU6-509P-201ENST00000363519 107 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 RNU6-978P-201ENST00000364371 103 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 U8.6-201ENST00000364939 135 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 SNORD115-20-201ENST00000365099 82 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 RNU6-806P-201ENST00000365147 105 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 RNU6-429P-201ENST00000384582 108 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 RNU6-823P-201ENST00000391042 103 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 RNU6-284P-201ENST00000411105 106 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 MTND4P19-201ENST00000446659 478 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 RNU6-893P-201ENST00000458841 100 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 MIR1270-201ENST00000459320 83 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 MIR3920-201ENST00000581751 86 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 MIR4432-201ENST00000581823 84 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 AC006504.6-201ENST00000590142 199 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 AC037487.3-201ENST00000606668 112 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 AC105081.1-201ENST00000617727 106 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.45□□□□□ -2.48
HOXC5Q00444 RNU4-40P-201ENST00000364351 143 ntBASIC-0.46□□□□□ -2.48
HOXC5Q00444 RNU6-651P-201ENST00000411040 105 ntBASIC-0.46□□□□□ -2.48
HOXC5Q00444 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-0.46□□□□□ -2.48
HOXC5Q00444 RNU7-70P-201ENST00000516941 66 ntBASIC-0.46□□□□□ -2.48
HOXC5Q00444 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.46□□□□□ -2.48
HOXC5Q00444 MIR548AE2-201ENST00000583456 67 ntBASIC-0.46□□□□□ -2.48
HOXC5Q00444 MIR4263-201ENST00000584745 83 ntBASIC-0.46□□□□□ -2.48
HOXC5Q00444 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.46□□□□□ -2.48
HOXC5Q00444 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.46□□□□□ -2.48
HOXC5Q00444 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.47□□□□□ -2.48
HOXC5Q00444 SNORD114-10-201ENST00000363409 72 ntBASIC-0.47□□□□□ -2.48
HOXC5Q00444 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.47□□□□□ -2.48
HOXC5Q00444 RNY1P6-201ENST00000384193 109 ntBASIC-0.47□□□□□ -2.48
HOXC5Q00444 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.47□□□□□ -2.48
HOXC5Q00444 RNU4-70P-201ENST00000384579 139 ntBASIC-0.47□□□□□ -2.48
HOXC5Q00444 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.47□□□□□ -2.48
HOXC5Q00444 RNU6-381P-201ENST00000391259 108 ntBASIC-0.47□□□□□ -2.48
HOXC5Q00444 MIR1252-201ENST00000408861 65 ntBASIC-0.47□□□□□ -2.48
HOXC5Q00444 RNU4-43P-201ENST00000410628 137 ntBASIC-0.47□□□□□ -2.48
HOXC5Q00444 ELOCP20-201ENST00000422460 345 ntBASIC-0.47□□□□□ -2.48
HOXC5Q00444 SNORD2.1-201ENST00000458762 69 ntBASIC-0.47□□□□□ -2.48
HOXC5Q00444 RNU7-113P-201ENST00000459273 62 ntBASIC-0.47□□□□□ -2.48
HOXC5Q00444 SERF1AP1-201ENST00000514575 187 ntBASIC-0.47□□□□□ -2.48
HOXC5Q00444 RNA5SP33-201ENST00000516687 98 ntBASIC-0.47□□□□□ -2.48
HOXC5Q00444 RNU7-188P-201ENST00000517063 64 ntBASIC-0.47□□□□□ -2.48
HOXC5Q00444 FTX_2.1-201ENST00000618816 94 ntBASIC-0.47□□□□□ -2.48
HOXC5Q00444 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
HOXC5Q00444 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.48□□□□□ -2.49
HOXC5Q00444 SNORD114-31-201ENST00000363219 75 ntBASIC-0.48□□□□□ -2.49
HOXC5Q00444 SNORD114-28-201ENST00000363610 72 ntBASIC-0.48□□□□□ -2.49
HOXC5Q00444 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.48□□□□□ -2.49
HOXC5Q00444 RNY3P1-201ENST00000365085 102 ntBASIC-0.48□□□□□ -2.49
HOXC5Q00444 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.48□□□□□ -2.49
HOXC5Q00444 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.48□□□□□ -2.49
HOXC5Q00444 MIR624-201ENST00000385217 97 ntBASIC-0.48□□□□□ -2.49
HOXC5Q00444 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.48□□□□□ -2.49
HOXC5Q00444 MIR4645-201ENST00000583158 77 ntBASIC-0.48□□□□□ -2.49
HOXC5Q00444 MIR4473-201ENST00000583731 91 ntBASIC-0.48□□□□□ -2.49
HOXC5Q00444 RNU7-10P-201ENST00000607194 63 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms